RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 TRHP20396 242 aaPredicted RBP9.24□□□□□ -0.93
ALMS1-201ENST00000423048 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
ALMS1-201ENST00000423048 AKNAQ7Z591 1439 aa9.23□□□□□ -0.93
ALMS1-201ENST00000423048 NCLP19338 710 aaKnown RBP9.23□□□□□ -0.93
ALMS1-201ENST00000423048 GRIN2BQ13224 1484 aa9.23□□□□□ -0.93
ALMS1-201ENST00000423048 RAB3GAP2Q9H2M9 1393 aa9.23□□□□□ -0.93
ALMS1-201ENST00000423048 CARD11Q9BXL7 1154 aa9.22□□□□□ -0.93
ALMS1-201ENST00000423048 TCERG1O14776 1098 aaKnown RBP9.22□□□□□ -0.93
ALMS1-201ENST00000423048 KIF15Q9NS87 1388 aa9.22□□□□□ -0.93
ALMS1-201ENST00000423048 GAPVD1Q14C86 1478 aa9.22□□□□□ -0.93
ALMS1-201ENST00000423048 FGD5Q6ZNL6 1462 aa9.22□□□□□ -0.93
ALMS1-201ENST00000423048 HFM1A2PYH4 1435 aa9.22□□□□□ -0.93
ALMS1-201ENST00000423048 PLPPR3Q6T4P5 718 aa9.22□□□□□ -0.93
ALMS1-201ENST00000423048 HSP90AA1P07900 732 aaKnown RBP9.21□□□□□ -0.93
ALMS1-201ENST00000423048 BIVM-ERCC5R4GMW8 1640 aa9.21□□□□□ -0.93
ALMS1-201ENST00000423048 L1TD1Q5T7N2 865 aaKnown RBP9.21□□□□□ -0.94
ALMS1-201ENST00000423048 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.94
ALMS1-201ENST00000423048 USP35Q9P2H5 1018 aa9.2□□□□□ -0.94
ALMS1-201ENST00000423048 LRRC9Q6ZRR7 1453 aa9.2□□□□□ -0.94
ALMS1-201ENST00000423048 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
ALMS1-201ENST00000423048 ROCK1Q13464 1354 aa9.2□□□□□ -0.94
ALMS1-201ENST00000423048 LMOD3Q0VAK6 560 aa9.19□□□□□ -0.94
ALMS1-201ENST00000423048 MIER1Q8N108 512 aa9.19□□□□□ -0.94
ALMS1-201ENST00000423048 NINLQ9Y2I6 1382 aa9.19□□□□□ -0.94
ALMS1-201ENST00000423048 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
ALMS1-201ENST00000423048 WWC1Q8IX03 1113 aa9.18□□□□□ -0.94
ALMS1-201ENST00000423048 DHX57Q6P158 1386 aaKnown RBP9.18□□□□□ -0.94
ALMS1-201ENST00000423048 MAPK8IP3Q9UPT6 1336 aa9.18□□□□□ -0.94
ALMS1-201ENST00000423048 IGF1RP08069 1367 aa9.18□□□□□ -0.94
ALMS1-201ENST00000423048 MRC2Q9UBG0 1479 aa9.17□□□□□ -0.94
ALMS1-201ENST00000423048 ABCA10Q8WWZ4 1543 aa9.17□□□□□ -0.94
ALMS1-201ENST00000423048 ANO8Q9HCE9 1232 aaPredicted RBP9.17□□□□□ -0.94
ALMS1-201ENST00000423048 PMFBP1Q8TBY8 1022 aa9.15□□□□□ -0.94
ALMS1-201ENST00000423048 SUPT6HQ7KZ85 1726 aaKnown RBP9.15□□□□□ -0.94
ALMS1-201ENST00000423048 NLRP13Q86W25 1043 aa9.15□□□□□ -0.94
ALMS1-201ENST00000423048 FAM9BQ8IZU0 186 aa9.15□□□□□ -0.94
ALMS1-201ENST00000423048 KIF21AQ7Z4S6 1674 aa9.15□□□□□ -0.95
ALMS1-201ENST00000423048 GOLGA6L6A8MZA4 724 aa9.15□□□□□ -0.95
ALMS1-201ENST00000423048 NRDCO43847 1150 aa9.15□□□□□ -0.95
ALMS1-201ENST00000423048 DAPK1P53355 1430 aa9.14□□□□□ -0.95
ALMS1-201ENST00000423048 TIAM1Q13009 1591 aa9.14□□□□□ -0.95
ALMS1-201ENST00000423048 MPHOSPH9Q99550 1183 aa9.14□□□□□ -0.95
ALMS1-201ENST00000423048 RRP7BPQ9NSQ0 103 aa9.13□□□□□ -0.95
ALMS1-201ENST00000423048 MCCP23508 829 aa9.13□□□□□ -0.95
ALMS1-201ENST00000423048 TRIM44Q96DX7 344 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-201ENST00000423048 CHIC2Q9UKJ5 165 aa9.12□□□□□ -0.95
ALMS1-201ENST00000423048 HTATSF1O43719 755 aaKnown RBP9.11□□□□□ -0.95
ALMS1-201ENST00000423048 HDGFL2Q7Z4V5 671 aaPredicted RBP9.11□□□□□ -0.95
ALMS1-201ENST00000423048 MYBBP1AQ9BQG0 1328 aaKnown RBP9.11□□□□□ -0.95
ALMS1-201ENST00000423048 CCDC144AA2RUR9 1427 aa9.11□□□□□ -0.95
ALMS1-201ENST00000423048 SYNJ2O15056 1496 aa9.11□□□□□ -0.95
ALMS1-201ENST00000423048 ZBED9Q6R2W3 1325 aa9.11□□□□□ -0.95
ALMS1-201ENST00000423048 BCANQ96GW7 911 aa9.1□□□□□ -0.95
ALMS1-201ENST00000423048 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
ALMS1-201ENST00000423048 DNAJC5BQ9UF47 199 aa9.1□□□□□ -0.95
ALMS1-201ENST00000423048 RWDD1Q9H446 243 aaPredicted RBP9.09□□□□□ -0.95
ALMS1-201ENST00000423048 NUP155O75694 1391 aa9.09□□□□□ -0.95
ALMS1-201ENST00000423048 KIAA0586Q9BVV6 1533 aa9.09□□□□□ -0.95
ALMS1-201ENST00000423048 FTSJ3Q8IY81 847 aaKnown RBP9.08□□□□□ -0.96
ALMS1-201ENST00000423048 TERF2IPQ9NYB0 399 aa9.08□□□□□ -0.96
ALMS1-201ENST00000423048 NOP58Q9Y2X3 529 aaKnown RBP9.08□□□□□ -0.96
ALMS1-201ENST00000423048 BRD4O60885 1362 aaPredicted RBP9.08□□□□□ -0.96
ALMS1-201ENST00000423048 MAGI1Q96QZ7 1491 aaPredicted RBP9.08□□□□□ -0.96
ALMS1-201ENST00000423048 CCDC7Q96M83 1385 aa9.08□□□□□ -0.96
ALMS1-201ENST00000423048 PTPRGP23470 1445 aa9.08□□□□□ -0.96
ALMS1-201ENST00000423048 CT47B1P0C2W7 299 aaPredicted RBP9.08□□□□□ -0.96
ALMS1-201ENST00000423048 TNNT2P45379 298 aaPredicted RBP9.08□□□□□ -0.96
ALMS1-201ENST00000423048 SYNJ1O43426 1573 aa9.07□□□□□ -0.96
ALMS1-201ENST00000423048 CCDC141Q6ZP82 1450 aa9.07□□□□□ -0.96
ALMS1-201ENST00000423048 FHOD3Q2V2M9 1422 aa9.07□□□□□ -0.96
ALMS1-201ENST00000423048 CGNL1Q0VF96 1302 aa9.07□□□□□ -0.96
ALMS1-201ENST00000423048 TOPBP1Q92547 1522 aa9.07□□□□□ -0.96
ALMS1-201ENST00000423048 CHGAP10645 457 aaKnown RBP9.07□□□□□ -0.96
ALMS1-201ENST00000423048 HSPA5P11021 654 aaKnown RBP9.07□□□□□ -0.96
ALMS1-201ENST00000423048 NCOA2Q15596 1464 aa9.06□□□□□ -0.96
ALMS1-201ENST00000423048 TROQ12816 1431 aaPredicted RBP9.06□□□□□ -0.96
ALMS1-201ENST00000423048 HMGB2P26583 209 aaKnown RBP9.06□□□□□ -0.96
ALMS1-201ENST00000423048 SYAP1Q96A49 352 aaPredicted RBP9.06□□□□□ -0.96
ALMS1-201ENST00000423048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.06□□□□□ -0.964e-7■■□□□ 12.8
ALMS1-201ENST00000423048 RPGRIP1LQ68CZ1 1315 aa9.05□□□□□ -0.96
ALMS1-201ENST00000423048 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.05□□□□□ -0.96
ALMS1-201ENST00000423048 GBP4Q96PP9 640 aa9.05□□□□□ -0.96
ALMS1-201ENST00000423048 FANCIQ9NVI1 1328 aa9.05□□□□□ -0.96
ALMS1-201ENST00000423048 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
ALMS1-201ENST00000423048 PDIA4P13667 645 aaKnown RBP9.04□□□□□ -0.96
ALMS1-201ENST00000423048 PKD2Q13563 968 aa9.04□□□□□ -0.96
ALMS1-201ENST00000423048 SPAG9O60271 1321 aaKnown RBP9.04□□□□□ -0.96
ALMS1-201ENST00000423048 HMMRO75330 724 aa9.04□□□□□ -0.96
ALMS1-201ENST00000423048 ARAP1Q96P48 1450 aa9.04□□□□□ -0.96
ALMS1-201ENST00000423048 HSCBQ8IWL3 235 aa9.04□□□□□ -0.96
ALMS1-201ENST00000423048 CCDC34Q96HJ3 373 aa9.03□□□□□ -0.96
ALMS1-201ENST00000423048 NPM2Q86SE8 214 aaKnown RBP9.03□□□□□ -0.96
ALMS1-201ENST00000423048 ISY1Q9ULR0 285 aaKnown RBP9.03□□□□□ -0.96
ALMS1-201ENST00000423048 SKOR2Q2VWA4 1001 aaPredicted RBP9.03□□□□□ -0.96
ALMS1-201ENST00000423048 CENPQQ7L2Z9 268 aaPredicted RBP9.03□□□□□ -0.96
ALMS1-201ENST00000423048 POGKQ9P215 609 aa9.02□□□□□ -0.96
ALMS1-201ENST00000423048 BICRAQ9NZM4 1560 aa9.02□□□□□ -0.97
ALMS1-201ENST00000423048 VGFO15240 615 aaPredicted RBP9.02□□□□□ -0.97
ALMS1-201ENST00000423048 INSRP06213 1382 aa9.02□□□□□ -0.97
ALMS1-201ENST00000423048 PRDM2Q13029 1718 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms