RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 MAP3K1Q13233 1512 aa28.23■■■□□ 2.11
MSL3-208ENST00000421368 EFCAB2Q5VUJ9 269 aa28.22■■■□□ 2.11
MSL3-208ENST00000421368 DENND4BO75064 1496 aaPredicted RBP28.21■■■□□ 2.11
MSL3-208ENST00000421368 ADGRL1O94910 1474 aa28.21■■■□□ 2.11
MSL3-208ENST00000421368 RAPGEF3O95398 923 aa28.21■■■□□ 2.11
MSL3-208ENST00000421368 SUPT6HQ7KZ85 1726 aaKnown RBP28.2■■■□□ 2.1
MSL3-208ENST00000421368 GPATCH8Q9UKJ3 1502 aaKnown RBP28.18■■■□□ 2.1
MSL3-208ENST00000421368 LRRC9Q6ZRR7 1453 aa28.17■■■□□ 2.1
MSL3-208ENST00000421368 SCAPERQ9BY12 1400 aa28.17■■■□□ 2.1
MSL3-208ENST00000421368 CCNB3Q8WWL7 1395 aa28.14■■■□□ 2.1
MSL3-208ENST00000421368 ITSN2Q9NZM3 1697 aa28.14■■■□□ 2.1
MSL3-208ENST00000421368 ABCC1P33527 1531 aa28.13■■■□□ 2.09
MSL3-208ENST00000421368 POGZQ7Z3K3 1410 aa28.12■■■□□ 2.09
MSL3-208ENST00000421368 NCOA2Q15596 1464 aa28.12■■■□□ 2.09
MSL3-208ENST00000421368 ZMYM4Q5VZL5 1548 aa28.12■■■□□ 2.09
MSL3-208ENST00000421368 SAMD9LQ8IVG5 1584 aa28.11■■■□□ 2.09
MSL3-208ENST00000421368 KANK4Q5T7N3 995 aaPredicted RBP28.09■■■□□ 2.09
MSL3-208ENST00000421368 ARHGEF12Q9NZN5 1544 aa28.07■■■□□ 2.08
MSL3-208ENST00000421368 ARHGEF40Q8TER5 1519 aa28.06■■■□□ 2.08
MSL3-208ENST00000421368 ZNF518AQ6AHZ1 1483 aa28.04■■■□□ 2.08
MSL3-208ENST00000421368 CFDP1Q9UEE9 299 aaPredicted RBP28.04■■■□□ 2.08
MSL3-208ENST00000421368 KDM5CP41229 1560 aa28.03■■■□□ 2.08
MSL3-208ENST00000421368 APLP2Q06481 763 aa28.03■■■□□ 2.08
MSL3-208ENST00000421368 ZNF777Q9ULD5 760 aaPredicted RBP28.03■■■□□ 2.08
MSL3-208ENST00000421368 SYCP2Q9BX26 1530 aa28.02■■■□□ 2.08
MSL3-208ENST00000421368 ZFYVE16Q7Z3T8 1539 aa28.01■■■□□ 2.07
MSL3-208ENST00000421368 MAGI2Q86UL8 1455 aa28■■■□□ 2.07
MSL3-208ENST00000421368 TRAPPC8Q9Y2L5 1435 aa28■■■□□ 2.07
MSL3-208ENST00000421368 AFAP1Q8N556 730 aa27.98■■■□□ 2.07
MSL3-208ENST00000421368 YEATS2Q9ULM3 1422 aa27.98■■■□□ 2.07
MSL3-208ENST00000421368 PLEKHH2Q8IVE3 1493 aa27.97■■■□□ 2.07
MSL3-208ENST00000421368 HECW2Q9P2P5 1572 aa27.97■■■□□ 2.07
MSL3-208ENST00000421368 KIAA1107Q9UPP5 1409 aa27.95■■■□□ 2.07
MSL3-208ENST00000421368 ZNF644Q9H582 1327 aaPredicted RBP27.93■■■□□ 2.06
MSL3-208ENST00000421368 KDM4FA0A1W2PPD8 638 aa27.93■■■□□ 2.06
MSL3-208ENST00000421368 SIGLEC1Q9BZZ2 1709 aa27.92■■■□□ 2.06
MSL3-208ENST00000421368 HNRNPMP52272 730 aaKnown RBP eCLIP27.92■■■□□ 2.06
MSL3-208ENST00000421368 KIDINS220Q9ULH0 1771 aa27.91■■■□□ 2.06
MSL3-208ENST00000421368 CAMSAP2Q08AD1 1489 aa27.9■■■□□ 2.06
MSL3-208ENST00000421368 MLH3Q9UHC1 1453 aa27.9■■■□□ 2.06
MSL3-208ENST00000421368 ABCA6Q8N139 1617 aa27.89■■■□□ 2.06
MSL3-208ENST00000421368 MYOM3Q5VTT5 1437 aa27.89■■■□□ 2.06
MSL3-208ENST00000421368 DIP2CQ9Y2E4 1556 aa27.88■■■□□ 2.05
MSL3-208ENST00000421368 MBD5Q9P267 1494 aa27.87■■■□□ 2.05
MSL3-208ENST00000421368 ATP10AO60312 1499 aa27.85■■■□□ 2.05
MSL3-208ENST00000421368 BCORL1Q5H9F3 1711 aa27.85■■■□□ 2.05
MSL3-208ENST00000421368 INO80Q9ULG1 1556 aaPredicted RBP27.84■■■□□ 2.05
MSL3-208ENST00000421368 MIA2Q96PC5 1412 aa27.83■■■□□ 2.05
MSL3-208ENST00000421368 MYT1LQ9UL68 1186 aa27.82■■■□□ 2.04
MSL3-208ENST00000421368 C9orf84Q5VXU9 1444 aa27.82■■■□□ 2.04
MSL3-208ENST00000421368 ATP7AQ04656 1500 aa27.81■■■□□ 2.04
MSL3-208ENST00000421368 ADAMTSL3P82987 1691 aa27.81■■■□□ 2.04
MSL3-208ENST00000421368 ARHGEF5Q12774 1597 aa27.79■■■□□ 2.04
MSL3-208ENST00000421368 SPAG9O60271 1321 aaKnown RBP27.79■■■□□ 2.04
MSL3-208ENST00000421368 ARID4BQ4LE39 1312 aaPredicted RBP27.79■■■□□ 2.04
MSL3-208ENST00000421368 AEBP2Q6ZN18 517 aaPredicted RBP27.79■■■□□ 2.04
MSL3-208ENST00000421368 REREQ9P2R6 1566 aa27.78■■■□□ 2.04
MSL3-208ENST00000421368 CCDC141Q6ZP82 1450 aa27.77■■■□□ 2.04
MSL3-208ENST00000421368 PTPN23Q9H3S7 1636 aa27.77■■■□□ 2.04
MSL3-208ENST00000421368 MADDQ8WXG6 1647 aa27.73■■■□□ 2.03
MSL3-208ENST00000421368 FGD6Q6ZV73 1430 aa27.73■■■□□ 2.03
MSL3-208ENST00000421368 ADGBQ8N7X0 1667 aa27.71■■■□□ 2.03
MSL3-208ENST00000421368 RSPH4AQ5TD94 716 aa27.69■■■□□ 2.02
MSL3-208ENST00000421368 RTEL1-TNFRSF6BF6WH68 1400 aa27.68■■■□□ 2.02
MSL3-208ENST00000421368 TCOF1Q13428 1488 aaKnown RBP27.68■■■□□ 2.02
MSL3-208ENST00000421368 AGLP35573 1532 aa27.67■■■□□ 2.02
MSL3-208ENST00000421368 FER1L4A9Z1Z3 1794 aa27.67■■■□□ 2.02
MSL3-208ENST00000421368 CROCC2H7BZ55 1655 aa27.66■■■□□ 2.02
MSL3-208ENST00000421368 RIMS1Q86UR5 1692 aaKnown RBP27.66■■■□□ 2.02
MSL3-208ENST00000421368 PLXNC1O60486 1568 aa27.66■■■□□ 2.02
MSL3-208ENST00000421368 MAST1Q9Y2H9 1570 aa27.65■■■□□ 2.02
MSL3-208ENST00000421368 PPARGC1BQ86YN6 1023 aaKnown RBP27.64■■■□□ 2.02
MSL3-208ENST00000421368 MLECQ14165 292 aa27.63■■■□□ 2.01
MSL3-208ENST00000421368 A2MP01023 1474 aa27.63■■■□□ 2.01
MSL3-208ENST00000421368 DNMT1P26358 1616 aaKnown RBP27.63■■■□□ 2.01
MSL3-208ENST00000421368 PTPRMP28827 1452 aa27.59■■■□□ 2.01
MSL3-208ENST00000421368 TSPY4P0CV99 314 aa27.59■■■□□ 2.01
MSL3-208ENST00000421368 TSPY10P0CW01 314 aa27.59■■■□□ 2.01
MSL3-208ENST00000421368 ABCC5O15440 1437 aa27.57■■■□□ 2
MSL3-208ENST00000421368 DAPK1P53355 1430 aa27.55■■■□□ 2
MSL3-208ENST00000421368 SHANK2Q9UPX8 1470 aa27.55■■■□□ 2
MSL3-208ENST00000421368 DHX29Q7Z478 1369 aaKnown RBP27.52■■■□□ 2
MSL3-208ENST00000421368 FAM50AQ14320 339 aaKnown RBP27.5■■□□□ 1.99
MSL3-208ENST00000421368 C3P01024 1663 aa27.43■■□□□ 1.98
MSL3-208ENST00000421368 CLTCQ00610 1675 aaKnown RBP27.43■■□□□ 1.98
MSL3-208ENST00000421368 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
MSL3-208ENST00000421368 EIF2AK4Q9P2K8 1649 aaKnown RBP27.41■■□□□ 1.98
MSL3-208ENST00000421368 MROH2AA6NES4 1674 aa27.41■■□□□ 1.98
MSL3-208ENST00000421368 KIF15Q9NS87 1388 aa27.39■■□□□ 1.98
MSL3-208ENST00000421368 KIF3BO15066 747 aa27.39■■□□□ 1.98
MSL3-208ENST00000421368 GGT6Q6P531 493 aa27.39■■□□□ 1.98
MSL3-208ENST00000421368 CHIC2Q9UKJ5 165 aa27.39■■□□□ 1.98
MSL3-208ENST00000421368 ADGRL2O95490 1459 aa27.38■■□□□ 1.97
MSL3-208ENST00000421368 RNF17Q9BXT8 1623 aaKnown RBP27.38■■□□□ 1.97
MSL3-208ENST00000421368 PLPPR3Q6T4P5 718 aa27.38■■□□□ 1.97
MSL3-208ENST00000421368 CNTLNQ9NXG0 1405 aa27.38■■□□□ 1.97
MSL3-208ENST00000421368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.36■■□□□ 1.97
MSL3-208ENST00000421368 PTPRKQ15262 1439 aa27.36■■□□□ 1.97
MSL3-208ENST00000421368 RRBP1Q9P2E9 1410 aaKnown RBP27.36■■□□□ 1.97
MSL3-208ENST00000421368 ESF1Q9H501 851 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms