RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 CARMIL2Q6F5E8 1435 aa23.14■■□□□ 1.3
CTSB-203ENST00000420692 ROCK1Q13464 1354 aa23.14■■□□□ 1.29
CTSB-203ENST00000420692 DDX10Q13206 875 aaKnown RBP23.13■■□□□ 1.29
CTSB-203ENST00000420692 KIF14Q15058 1648 aa23.12■■□□□ 1.29
CTSB-203ENST00000420692 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
CTSB-203ENST00000420692 MPHOSPH9Q99550 1183 aa23.1■■□□□ 1.29
CTSB-203ENST00000420692 GPATCH8Q9UKJ3 1502 aaKnown RBP23.1■■□□□ 1.29
CTSB-203ENST00000420692 ADCY10Q96PN6 1610 aa23.1■■□□□ 1.29
CTSB-203ENST00000420692 ABCA8O94911 1581 aa23.09■■□□□ 1.29
CTSB-203ENST00000420692 KCNH8Q96L42 1107 aa23.09■■□□□ 1.29
CTSB-203ENST00000420692 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
CTSB-203ENST00000420692 FOXD1Q16676 465 aa23.04■■□□□ 1.28
CTSB-203ENST00000420692 ITSN2Q9NZM3 1697 aa23.04■■□□□ 1.28
CTSB-203ENST00000420692 ATP10BO94823 1461 aa23.03■■□□□ 1.28
CTSB-203ENST00000420692 CFDP1Q9UEE9 299 aaPredicted RBP23.03■■□□□ 1.28
CTSB-203ENST00000420692 ANKRD30BQ9BXX2 1392 aa22.98■■□□□ 1.27
CTSB-203ENST00000420692 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
CTSB-203ENST00000420692 ABCC10Q5T3U5 1492 aa22.98■■□□□ 1.27
CTSB-203ENST00000420692 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
CTSB-203ENST00000420692 CROCC2H7BZ55 1655 aa22.95■■□□□ 1.26
CTSB-203ENST00000420692 ZNF777Q9ULD5 760 aaPredicted RBP22.95■■□□□ 1.26
CTSB-203ENST00000420692 ADGBQ8N7X0 1667 aa22.94■■□□□ 1.26
CTSB-203ENST00000420692 PLEKHD1A6NEE1 506 aa22.94■■□□□ 1.26
CTSB-203ENST00000420692 CHD1O14646 1710 aa22.94■■□□□ 1.26
CTSB-203ENST00000420692 ADGRL2O95490 1459 aa22.93■■□□□ 1.26
CTSB-203ENST00000420692 L3MBTL2Q969R5 705 aa22.93■■□□□ 1.26
CTSB-203ENST00000420692 PZPP20742 1482 aa22.92■■□□□ 1.26
CTSB-203ENST00000420692 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
CTSB-203ENST00000420692 PTPRGP23470 1445 aa22.9■■□□□ 1.26
CTSB-203ENST00000420692 SLC4A1APQ9BWU0 796 aaKnown RBP22.89■■□□□ 1.25
CTSB-203ENST00000420692 TEX14Q8IWB6 1497 aa22.86■■□□□ 1.25
CTSB-203ENST00000420692 HSPA5P11021 654 aaKnown RBP22.86■■□□□ 1.25
CTSB-203ENST00000420692 SHROOM2Q13796 1616 aa22.84■■□□□ 1.25
CTSB-203ENST00000420692 NBPF8Q3BBV2 869 aa22.84■■□□□ 1.25
CTSB-203ENST00000420692 ANKRD30AQ9BXX3 1397 aa22.82■■□□□ 1.24
CTSB-203ENST00000420692 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
CTSB-203ENST00000420692 CCER2I3L3R5 266 aa22.81■■□□□ 1.24
CTSB-203ENST00000420692 ANP32CO43423 234 aa22.8■■□□□ 1.24
CTSB-203ENST00000420692 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
CTSB-203ENST00000420692 SHANK2Q9UPX8 1470 aa22.8■■□□□ 1.24
CTSB-203ENST00000420692 C9orf84Q5VXU9 1444 aa22.79■■□□□ 1.24
CTSB-203ENST00000420692 ANKRD50Q9ULJ7 1429 aa22.79■■□□□ 1.24
CTSB-203ENST00000420692 MBD5Q9P267 1494 aa22.77■■□□□ 1.24
CTSB-203ENST00000420692 CDC42BPBQ9Y5S2 1711 aa22.77■■□□□ 1.24
CTSB-203ENST00000420692 EIF4G2P78344 907 aaKnown RBP eCLIP22.77■■□□□ 1.24
CTSB-203ENST00000420692 KIAA1107Q9UPP5 1409 aa22.76■■□□□ 1.23
CTSB-203ENST00000420692 HNRNPMP52272 730 aaKnown RBP eCLIP22.76■■□□□ 1.23
CTSB-203ENST00000420692 C11orf95C9JLR9 678 aaPredicted RBP22.74■■□□□ 1.23
CTSB-203ENST00000420692 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
CTSB-203ENST00000420692 SAMD9LQ8IVG5 1584 aa22.74■■□□□ 1.23
CTSB-203ENST00000420692 PKD2Q13563 968 aa22.73■■□□□ 1.23
CTSB-203ENST00000420692 PREX2Q70Z35 1606 aa22.72■■□□□ 1.23
CTSB-203ENST00000420692 PELP1Q8IZL8 1130 aaKnown RBP22.71■■□□□ 1.23
CTSB-203ENST00000420692 SPATA31E1Q6ZUB1 1445 aa22.7■■□□□ 1.22
CTSB-203ENST00000420692 SUPT16HQ9Y5B9 1047 aaKnown RBP22.69■■□□□ 1.22
CTSB-203ENST00000420692 TSPY4P0CV99 314 aa22.68■■□□□ 1.22
CTSB-203ENST00000420692 TSPY10P0CW01 314 aa22.68■■□□□ 1.22
CTSB-203ENST00000420692 TTC37Q6PGP7 1564 aa22.67■■□□□ 1.22
CTSB-203ENST00000420692 NUP155O75694 1391 aa22.67■■□□□ 1.22
CTSB-203ENST00000420692 KIF15Q9NS87 1388 aa22.66■■□□□ 1.22
CTSB-203ENST00000420692 ABCC2Q92887 1545 aa22.66■■□□□ 1.22
CTSB-203ENST00000420692 KDM5DQ9BY66 1539 aa22.66■■□□□ 1.22
CTSB-203ENST00000420692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.22
CTSB-203ENST00000420692 CCDC7Q96M83 1385 aa22.65■■□□□ 1.22
CTSB-203ENST00000420692 CCDC141Q6ZP82 1450 aa22.64■■□□□ 1.22
CTSB-203ENST00000420692 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
CTSB-203ENST00000420692 CNTLNQ9NXG0 1405 aa22.61■■□□□ 1.21
CTSB-203ENST00000420692 SYCP2Q9BX26 1530 aa22.59■■□□□ 1.21
CTSB-203ENST00000420692 POLR1AO95602 1720 aaPredicted RBP22.57■■□□□ 1.2
CTSB-203ENST00000420692 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
CTSB-203ENST00000420692 RSPH4AQ5TD94 716 aa22.57■■□□□ 1.2
CTSB-203ENST00000420692 KIF7Q2M1P5 1343 aa22.56■■□□□ 1.2
CTSB-203ENST00000420692 MYO5CQ9NQX4 1742 aa22.55■■□□□ 1.2
CTSB-203ENST00000420692 MAST1Q9Y2H9 1570 aa22.54■■□□□ 1.2
CTSB-203ENST00000420692 ZCCHC11Q5TAX3 1644 aaKnown RBP22.53■■□□□ 1.2
CTSB-203ENST00000420692 UHRF1BP1Q6BDS2 1440 aa22.53■■□□□ 1.2
CTSB-203ENST00000420692 ARHGEF12Q9NZN5 1544 aa22.53■■□□□ 1.2
CTSB-203ENST00000420692 BCORL1Q5H9F3 1711 aa22.52■■□□□ 1.19
CTSB-203ENST00000420692 FAM135AQ9P2D6 1515 aa22.51■■□□□ 1.19
CTSB-203ENST00000420692 CCDC184Q52MB2 194 aa22.51■■□□□ 1.19
CTSB-203ENST00000420692 UHRF1BP1LA0JNW5 1464 aa22.51■■□□□ 1.19
CTSB-203ENST00000420692 ZNF326Q5BKZ1 582 aaKnown RBP22.5■■□□□ 1.19
CTSB-203ENST00000420692 USP47Q96K76 1375 aa22.49■■□□□ 1.19
CTSB-203ENST00000420692 KDM5CP41229 1560 aa22.48■■□□□ 1.19
CTSB-203ENST00000420692 PRKRIP1Q9H875 184 aaPredicted RBP22.48■■□□□ 1.19
CTSB-203ENST00000420692 UNC13BO14795 1591 aa22.47■■□□□ 1.19
CTSB-203ENST00000420692 PLCH2O75038 1416 aa22.46■■□□□ 1.19
CTSB-203ENST00000420692 RALGAPBQ86X10 1494 aa22.46■■□□□ 1.19
CTSB-203ENST00000420692 PLXNC1O60486 1568 aa22.46■■□□□ 1.19
CTSB-203ENST00000420692 PLEKHH2Q8IVE3 1493 aa22.45■■□□□ 1.18
CTSB-203ENST00000420692 PLA2R1Q13018 1463 aa22.43■■□□□ 1.18
CTSB-203ENST00000420692 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
CTSB-203ENST00000420692 DHX29Q7Z478 1369 aaKnown RBP22.39■■□□□ 1.18
CTSB-203ENST00000420692 FKBP8Q14318 412 aa22.39■■□□□ 1.17
CTSB-203ENST00000420692 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
CTSB-203ENST00000420692 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.17
CTSB-203ENST00000420692 IQGAP3Q86VI3 1631 aa22.38■■□□□ 1.17
CTSB-203ENST00000420692 ABCC1P33527 1531 aa22.38■■□□□ 1.17
CTSB-203ENST00000420692 EFCAB2Q5VUJ9 269 aa22.38■■□□□ 1.17
CTSB-203ENST00000420692 TRAPPC8Q9Y2L5 1435 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms