RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 FER1L4A9Z1Z3 1794 aa25.86■■□□□ 1.73
PTPA-213ENST00000419582 PREX1Q8TCU6 1659 aa25.86■■□□□ 1.73
PTPA-213ENST00000419582 ATP10AO60312 1499 aa25.85■■□□□ 1.73
PTPA-213ENST00000419582 HECW1Q76N89 1606 aa25.85■■□□□ 1.73
PTPA-213ENST00000419582 PTPRTO14522 1441 aa25.83■■□□□ 1.73
PTPA-213ENST00000419582 STRCQ7RTU9 1775 aa25.83■■□□□ 1.73
PTPA-213ENST00000419582 SETD1BQ9UPS6 1966 aaKnown RBP25.82■■□□□ 1.72
PTPA-213ENST00000419582 SPATA31D1Q6ZQQ2 1576 aa25.81■■□□□ 1.72
PTPA-213ENST00000419582 SCAPERQ9BY12 1400 aa25.8■■□□□ 1.72
PTPA-213ENST00000419582 PLCH2O75038 1416 aa25.8■■□□□ 1.72
PTPA-213ENST00000419582 C9orf84Q5VXU9 1444 aa25.8■■□□□ 1.72
PTPA-213ENST00000419582 IQSEC2Q5JU85 1478 aa25.79■■□□□ 1.72
PTPA-213ENST00000419582 CEBPAP49715 358 aaPredicted RBP25.78■■□□□ 1.72
PTPA-213ENST00000419582 UHRF1BP1Q6BDS2 1440 aa25.78■■□□□ 1.72
PTPA-213ENST00000419582 CSRNP3Q8WYN3 585 aa25.76■■□□□ 1.71
PTPA-213ENST00000419582 LTBP4Q8N2S1 1624 aa25.7■■□□□ 1.71
PTPA-213ENST00000419582 EFCAB2Q5VUJ9 269 aa25.7■■□□□ 1.7
PTPA-213ENST00000419582 ZNF518AQ6AHZ1 1483 aa25.63■■□□□ 1.69
PTPA-213ENST00000419582 TRAPPC8Q9Y2L5 1435 aa25.62■■□□□ 1.69
PTPA-213ENST00000419582 REREQ9P2R6 1566 aa25.61■■□□□ 1.69
PTPA-213ENST00000419582 KDM5CP41229 1560 aa25.58■■□□□ 1.69
PTPA-213ENST00000419582 NCOA1Q15788 1441 aa25.58■■□□□ 1.69
PTPA-213ENST00000419582 AFAP1Q8N556 730 aa25.57■■□□□ 1.68
PTPA-213ENST00000419582 AGLP35573 1532 aa25.54■■□□□ 1.68
PTPA-213ENST00000419582 MLH3Q9UHC1 1453 aa25.53■■□□□ 1.68
PTPA-213ENST00000419582 CDK13Q14004 1512 aaKnown RBP25.53■■□□□ 1.68
PTPA-213ENST00000419582 CDK11AQ9UQ88 783 aaPredicted RBP25.53■■□□□ 1.68
PTPA-213ENST00000419582 RANGAP1P46060 587 aaPredicted RBP25.52■■□□□ 1.68
PTPA-213ENST00000419582 C3P01024 1663 aa25.52■■□□□ 1.68
PTPA-213ENST00000419582 EEA1Q15075 1411 aa25.51■■□□□ 1.67
PTPA-213ENST00000419582 ESF1Q9H501 851 aaKnown RBP25.5■■□□□ 1.67
PTPA-213ENST00000419582 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
PTPA-213ENST00000419582 DIP2CQ9Y2E4 1556 aa25.49■■□□□ 1.67
PTPA-213ENST00000419582 MYO5CQ9NQX4 1742 aa25.49■■□□□ 1.67
PTPA-213ENST00000419582 NPATQ14207 1427 aa25.46■■□□□ 1.67
PTPA-213ENST00000419582 UBAP1LF5GYI3 381 aa25.44■■□□□ 1.66
PTPA-213ENST00000419582 MYT1LQ9UL68 1186 aa25.41■■□□□ 1.66
PTPA-213ENST00000419582 TROQ12816 1431 aaPredicted RBP25.4■■□□□ 1.66
PTPA-213ENST00000419582 FMN1Q68DA7 1419 aa25.4■■□□□ 1.66
PTPA-213ENST00000419582 PKD2Q13563 968 aa25.4■■□□□ 1.66
PTPA-213ENST00000419582 ARHGAP5Q13017 1502 aa25.4■■□□□ 1.66
PTPA-213ENST00000419582 CAMSAP1Q5T5Y3 1602 aa25.39■■□□□ 1.66
PTPA-213ENST00000419582 ZNF335Q9H4Z2 1342 aaPredicted RBP25.38■■□□□ 1.65
PTPA-213ENST00000419582 ABCA6Q8N139 1617 aa25.38■■□□□ 1.65
PTPA-213ENST00000419582 KIF14Q15058 1648 aa25.36■■□□□ 1.65
PTPA-213ENST00000419582 PLA2R1Q13018 1463 aa25.35■■□□□ 1.65
PTPA-213ENST00000419582 NCKAP5LQ9HCH0 1330 aa25.35■■□□□ 1.65
PTPA-213ENST00000419582 ZMYM3Q14202 1370 aa25.34■■□□□ 1.65
PTPA-213ENST00000419582 CLIP1P30622 1438 aa25.34■■□□□ 1.65
PTPA-213ENST00000419582 TCOF1Q13428 1488 aaKnown RBP25.31■■□□□ 1.64
PTPA-213ENST00000419582 MROH2AA6NES4 1674 aa25.31■■□□□ 1.64
PTPA-213ENST00000419582 ATP1B4Q9UN42 357 aaPredicted RBP25.3■■□□□ 1.64
PTPA-213ENST00000419582 ABCC1P33527 1531 aa25.27■■□□□ 1.64
PTPA-213ENST00000419582 CDC42BPBQ9Y5S2 1711 aa25.26■■□□□ 1.63
PTPA-213ENST00000419582 KIDINS220Q9ULH0 1771 aa25.26■■□□□ 1.63
PTPA-213ENST00000419582 HSPA1LP34931 641 aa25.23■■□□□ 1.63
PTPA-213ENST00000419582 PPP6R1Q9UPN7 881 aa25.22■■□□□ 1.63
PTPA-213ENST00000419582 ZNF142P52746 1687 aaPredicted RBP25.21■■□□□ 1.63
PTPA-213ENST00000419582 TOM1O60784 492 aa25.21■■□□□ 1.63
PTPA-213ENST00000419582 MED1Q15648 1581 aaPredicted RBP25.21■■□□□ 1.63
PTPA-213ENST00000419582 ARHGAP35Q9NRY4 1499 aa25.21■■□□□ 1.63
PTPA-213ENST00000419582 PTPRKQ15262 1439 aa25.2■■□□□ 1.62
PTPA-213ENST00000419582 PREX2Q70Z35 1606 aa25.19■■□□□ 1.62
PTPA-213ENST00000419582 ITSN2Q9NZM3 1697 aa25.19■■□□□ 1.62
PTPA-213ENST00000419582 CEP170BQ9Y4F5 1589 aaPredicted RBP25.16■■□□□ 1.62
PTPA-213ENST00000419582 SAMD9LQ8IVG5 1584 aa25.14■■□□□ 1.62
PTPA-213ENST00000419582 SPAG9O60271 1321 aaKnown RBP25.13■■□□□ 1.61
PTPA-213ENST00000419582 CPS1P31327 1500 aa25.13■■□□□ 1.61
PTPA-213ENST00000419582 MYO3AQ8NEV4 1616 aa25.13■■□□□ 1.61
PTPA-213ENST00000419582 UBTFP17480 764 aaKnown RBP25.09■■□□□ 1.61
PTPA-213ENST00000419582 PIP4K2BP78356 416 aa25.09■■□□□ 1.61
PTPA-213ENST00000419582 A2ML1A8K2U0 1454 aa25.09■■□□□ 1.61
PTPA-213ENST00000419582 KIAA1107Q9UPP5 1409 aa25.08■■□□□ 1.61
PTPA-213ENST00000419582 PLXNC1O60486 1568 aa25.08■■□□□ 1.61
PTPA-213ENST00000419582 CCDC18Q5T9S5 1454 aa25.07■■□□□ 1.6
PTPA-213ENST00000419582 SHANK2Q9UPX8 1470 aa25.07■■□□□ 1.6
PTPA-213ENST00000419582 LRRIQ1Q96JM4 1722 aa25.06■■□□□ 1.6
PTPA-213ENST00000419582 A2MP01023 1474 aa25.06■■□□□ 1.6
PTPA-213ENST00000419582 SCAF1Q9H7N4 1312 aaKnown RBP25.06■■□□□ 1.6
PTPA-213ENST00000419582 CLTCQ00610 1675 aaKnown RBP25.05■■□□□ 1.6
PTPA-213ENST00000419582 CASKIN1Q8WXD9 1431 aa25.03■■□□□ 1.6
PTPA-213ENST00000419582 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
PTPA-213ENST00000419582 DNMT1P26358 1616 aaKnown RBP25.03■■□□□ 1.6
PTPA-213ENST00000419582 CDC42BPAQ5VT25 1732 aa25.03■■□□□ 1.6
PTPA-213ENST00000419582 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
PTPA-213ENST00000419582 HNRNPMP52272 730 aaKnown RBP eCLIP25.02■■□□□ 1.6
PTPA-213ENST00000419582 GGT6Q6P531 493 aa25.02■■□□□ 1.6
PTPA-213ENST00000419582 ATP7AQ04656 1500 aa25.02■■□□□ 1.6
PTPA-213ENST00000419582 PLEKHH2Q8IVE3 1493 aa25■■□□□ 1.59
PTPA-213ENST00000419582 GPATCH8Q9UKJ3 1502 aaKnown RBP25■■□□□ 1.59
PTPA-213ENST00000419582 ZNF777Q9ULD5 760 aaPredicted RBP24.99■■□□□ 1.59
PTPA-213ENST00000419582 SYCP2Q9BX26 1530 aa24.98■■□□□ 1.59
PTPA-213ENST00000419582 NEURL4Q96JN8 1562 aa24.97■■□□□ 1.59
PTPA-213ENST00000419582 INO80Q9ULG1 1556 aaPredicted RBP24.97■■□□□ 1.59
PTPA-213ENST00000419582 ANKLE2Q86XL3 938 aa24.96■■□□□ 1.59
PTPA-213ENST00000419582 ALKQ9UM73 1620 aa24.95■■□□□ 1.58
PTPA-213ENST00000419582 MED14O60244 1454 aa24.93■■□□□ 1.58
PTPA-213ENST00000419582 VWDEQ8N2E2 1590 aa24.93■■□□□ 1.58
PTPA-213ENST00000419582 THEMISQ8N1K5 641 aaPredicted RBP24.92■■□□□ 1.58
PTPA-213ENST00000419582 CFDP1Q9UEE9 299 aaPredicted RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms