RNA–Protein interactions for RNA: ENST00000417942.5

XIST-202, X inactive specific transcript, humanhuman

TSL 3

Gene XIST, Length 724 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-202ENST00000417942 TTBK1Q5TCY1 1321 aaPredicted RBP11.99□□□□□ -0.49
XIST-202ENST00000417942 ST18O60284 1047 aa11.95□□□□□ -0.5
XIST-202ENST00000417942 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
XIST-202ENST00000417942 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
XIST-202ENST00000417942 KIF3CO14782 793 aa11.91□□□□□ -0.5
XIST-202ENST00000417942 SNPHO15079 494 aa11.91□□□□□ -0.5
XIST-202ENST00000417942 C2orf72A6NCS6 295 aa11.86□□□□□ -0.51
XIST-202ENST00000417942 RYDENQ9NUL5 291 aaKnown RBP11.85□□□□□ -0.51
XIST-202ENST00000417942 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
XIST-202ENST00000417942 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
XIST-202ENST00000417942 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
XIST-202ENST00000417942 CDAN1Q8IWY9 1227 aa11.77□□□□□ -0.53
XIST-202ENST00000417942 TMC2Q8TDI7 906 aa11.77□□□□□ -0.53
XIST-202ENST00000417942 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
XIST-202ENST00000417942 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
XIST-202ENST00000417942 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
XIST-202ENST00000417942 CRISPLD2Q9H0B8 497 aa11.74□□□□□ -0.53
XIST-202ENST00000417942 GPR153Q6NV75 609 aa11.73□□□□□ -0.53
XIST-202ENST00000417942 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
XIST-202ENST00000417942 POTEB3A0JP26 581 aa11.72□□□□□ -0.53
XIST-202ENST00000417942 POTEBQ6S5H4 581 aa11.72□□□□□ -0.53
XIST-202ENST00000417942 FOXK1P85037 733 aa11.71□□□□□ -0.53
XIST-202ENST00000417942 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.53
XIST-202ENST00000417942 ZSWIM6Q9HCJ5 1215 aa11.71□□□□□ -0.53
XIST-202ENST00000417942 EMP3P54852 163 aa11.7□□□□□ -0.54
XIST-202ENST00000417942 DSG2Q14126 1118 aa11.7□□□□□ -0.54
XIST-202ENST00000417942 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
XIST-202ENST00000417942 SLC34A2O95436 690 aa11.68□□□□□ -0.54
XIST-202ENST00000417942 PLPP6Q8IY26 295 aa11.68□□□□□ -0.54
XIST-202ENST00000417942 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.54
XIST-202ENST00000417942 ARSIQ5FYB1 569 aa11.67□□□□□ -0.54
XIST-202ENST00000417942 FAM205CA6NFA0 338 aa11.65□□□□□ -0.54
XIST-202ENST00000417942 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.54
XIST-202ENST00000417942 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
XIST-202ENST00000417942 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
XIST-202ENST00000417942 PCDHGA4Q9Y5G9 962 aa11.63□□□□□ -0.55
XIST-202ENST00000417942 PDE4AP27815 886 aa11.62□□□□□ -0.55
XIST-202ENST00000417942 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
XIST-202ENST00000417942 MFSD10Q14728 455 aa11.61□□□□□ -0.55
XIST-202ENST00000417942 PPP1R15BQ5SWA1 713 aa11.61□□□□□ -0.55
XIST-202ENST00000417942 PTCD2Q8WV60 388 aaKnown RBP11.6□□□□□ -0.55
XIST-202ENST00000417942 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
XIST-202ENST00000417942 LARP6Q9BRS8 491 aaKnown RBP11.59□□□□□ -0.55
XIST-202ENST00000417942 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
XIST-202ENST00000417942 KDM4FA0A1W2PPD8 638 aa11.58□□□□□ -0.56
XIST-202ENST00000417942 NUDT7P0C024 238 aa11.58□□□□□ -0.56
XIST-202ENST00000417942 ERBB3P21860 1342 aa11.57□□□□□ -0.56
XIST-202ENST00000417942 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
XIST-202ENST00000417942 VARS2Q5ST30 1063 aaKnown RBP11.55□□□□□ -0.56
XIST-202ENST00000417942 OXER1Q8TDS5 423 aa11.55□□□□□ -0.56
XIST-202ENST00000417942 KRTAP3-3Q9BYR6 98 aa11.55□□□□□ -0.56
XIST-202ENST00000417942 KRTAP3-2Q9BYR7 98 aa11.55□□□□□ -0.56
XIST-202ENST00000417942 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
XIST-202ENST00000417942 UPF1Q92900 1129 aaKnown RBP eCLIP11.51□□□□□ -0.57
XIST-202ENST00000417942 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
XIST-202ENST00000417942 MMRN1Q13201 1228 aa11.5□□□□□ -0.57
XIST-202ENST00000417942 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
XIST-202ENST00000417942 SPNS2Q8IVW8 549 aa11.48□□□□□ -0.57
XIST-202ENST00000417942 ZNF687Q8N1G0 1237 aa11.47□□□□□ -0.57
XIST-202ENST00000417942 CAMK2BQ13554 666 aa11.46□□□□□ -0.57
XIST-202ENST00000417942 TBC1D12O60347 775 aa11.44□□□□□ -0.58
XIST-202ENST00000417942 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
XIST-202ENST00000417942 POTEEQ6S8J3 1075 aa11.42□□□□□ -0.58
XIST-202ENST00000417942 ERICH6Q7L0X2 663 aa11.41□□□□□ -0.58
XIST-202ENST00000417942 PRKCSHP14314 528 aaPredicted RBP11.4□□□□□ -0.58
XIST-202ENST00000417942 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
XIST-202ENST00000417942 EVI5O60447 810 aa11.37□□□□□ -0.59
XIST-202ENST00000417942 PSDA5PKW4 1024 aaPredicted RBP11.35□□□□□ -0.59
XIST-202ENST00000417942 MAP3K9P80192 1104 aa11.35□□□□□ -0.59
XIST-202ENST00000417942 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
XIST-202ENST00000417942 DPYSL4O14531 572 aa11.34□□□□□ -0.59
XIST-202ENST00000417942 AXIN2Q9Y2T1 843 aa11.33□□□□□ -0.6
XIST-202ENST00000417942 FOSBP53539 338 aa11.32□□□□□ -0.6
XIST-202ENST00000417942 PBX2P40425 430 aa11.31□□□□□ -0.6
XIST-202ENST00000417942 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
XIST-202ENST00000417942 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
XIST-202ENST00000417942 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
XIST-202ENST00000417942 E2F4Q16254 413 aa11.29□□□□□ -0.6
XIST-202ENST00000417942 JPH4Q96JJ6 628 aa11.28□□□□□ -0.6
XIST-202ENST00000417942 ARHGAP33O14559 1287 aa11.26□□□□□ -0.61
XIST-202ENST00000417942 PSEN2P49810 448 aa11.26□□□□□ -0.61
XIST-202ENST00000417942 WDR70Q9NW82 654 aa11.26□□□□□ -0.61
XIST-202ENST00000417942 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
XIST-202ENST00000417942 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
XIST-202ENST00000417942 PCDHGA10Q9Y5H3 936 aa11.25□□□□□ -0.61
XIST-202ENST00000417942 PDIA6Q15084 440 aa11.24□□□□□ -0.61
XIST-202ENST00000417942 ANKRD13DQ6ZTN6 518 aa11.24□□□□□ -0.61
XIST-202ENST00000417942 BCL2L12Q9HB09 334 aa11.24□□□□□ -0.61
XIST-202ENST00000417942 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
XIST-202ENST00000417942 PTGER2P43116 358 aa11.21□□□□□ -0.61
XIST-202ENST00000417942 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
XIST-202ENST00000417942 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
XIST-202ENST00000417942 PHF14O94880 888 aa11.2□□□□□ -0.62
XIST-202ENST00000417942 ADGRD1Q6QNK2 874 aa11.17□□□□□ -0.62
XIST-202ENST00000417942 KCNV2Q8TDN2 545 aa11.17□□□□□ -0.62
XIST-202ENST00000417942 DDX12PQ92771 950 aa11.17□□□□□ -0.62
XIST-202ENST00000417942 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
XIST-202ENST00000417942 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
XIST-202ENST00000417942 TK2O00142 265 aa11.15□□□□□ -0.62
XIST-202ENST00000417942 HRO43593 1189 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms