RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
TGFBR3-203ENST00000417833 EHBP1L1Q8N3D4 1523 aa20.92■□□□□ 0.94
TGFBR3-203ENST00000417833 CDC42BPBQ9Y5S2 1711 aa20.91■□□□□ 0.94
TGFBR3-203ENST00000417833 PREX2Q70Z35 1606 aa20.9■□□□□ 0.94
TGFBR3-203ENST00000417833 DENND4BO75064 1496 aaPredicted RBP20.89■□□□□ 0.94
TGFBR3-203ENST00000417833 LMTK3Q96Q04 1460 aa20.89■□□□□ 0.94
TGFBR3-203ENST00000417833 CDC42BPAQ5VT25 1732 aa20.89■□□□□ 0.93
TGFBR3-203ENST00000417833 ARHGAP5Q13017 1502 aa20.88■□□□□ 0.93
TGFBR3-203ENST00000417833 RAPGEF3O95398 923 aa20.87■□□□□ 0.93
TGFBR3-203ENST00000417833 FRMPD1Q5SYB0 1578 aa20.87■□□□□ 0.93
TGFBR3-203ENST00000417833 GPATCH8Q9UKJ3 1502 aaKnown RBP20.87■□□□□ 0.93
TGFBR3-203ENST00000417833 RICTORQ6R327 1708 aa20.87■□□□□ 0.93
TGFBR3-203ENST00000417833 SCAPERQ9BY12 1400 aa20.85■□□□□ 0.93
TGFBR3-203ENST00000417833 LRRC9Q6ZRR7 1453 aa20.84■□□□□ 0.93
TGFBR3-203ENST00000417833 CCNB3Q8WWL7 1395 aa20.84■□□□□ 0.93
TGFBR3-203ENST00000417833 PTPRMP28827 1452 aa20.83■□□□□ 0.93
TGFBR3-203ENST00000417833 SUPT6HQ7KZ85 1726 aaKnown RBP20.82■□□□□ 0.92
TGFBR3-203ENST00000417833 ADAMTSL3P82987 1691 aa20.8■□□□□ 0.92
TGFBR3-203ENST00000417833 POGZQ7Z3K3 1410 aa20.8■□□□□ 0.92
TGFBR3-203ENST00000417833 ZMYM4Q5VZL5 1548 aa20.8■□□□□ 0.92
TGFBR3-203ENST00000417833 NCOA2Q15596 1464 aa20.79■□□□□ 0.92
TGFBR3-203ENST00000417833 MAGI2Q86UL8 1455 aa20.79■□□□□ 0.92
TGFBR3-203ENST00000417833 ITSN2Q9NZM3 1697 aa20.78■□□□□ 0.92
TGFBR3-203ENST00000417833 APLP2Q06481 763 aa20.78■□□□□ 0.92
TGFBR3-203ENST00000417833 KANK4Q5T7N3 995 aaPredicted RBP20.78■□□□□ 0.92
TGFBR3-203ENST00000417833 CFDP1Q9UEE9 299 aaPredicted RBP20.78■□□□□ 0.92
TGFBR3-203ENST00000417833 ABCC1P33527 1531 aa20.78■□□□□ 0.92
TGFBR3-203ENST00000417833 ZNF518AQ6AHZ1 1483 aa20.76■□□□□ 0.91
TGFBR3-203ENST00000417833 SAMD9LQ8IVG5 1584 aa20.76■□□□□ 0.91
TGFBR3-203ENST00000417833 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
TGFBR3-203ENST00000417833 ARHGEF12Q9NZN5 1544 aa20.74■□□□□ 0.91
TGFBR3-203ENST00000417833 KDM5CP41229 1560 aa20.74■□□□□ 0.91
TGFBR3-203ENST00000417833 KIAA1107Q9UPP5 1409 aa20.74■□□□□ 0.91
TGFBR3-203ENST00000417833 SOCS7O14512 581 aa20.72■□□□□ 0.91
TGFBR3-203ENST00000417833 ZNF777Q9ULD5 760 aaPredicted RBP20.72■□□□□ 0.91
TGFBR3-203ENST00000417833 AFAP1Q8N556 730 aa20.71■□□□□ 0.91
TGFBR3-203ENST00000417833 ARHGEF40Q8TER5 1519 aa20.71■□□□□ 0.91
TGFBR3-203ENST00000417833 TRAPPC8Q9Y2L5 1435 aa20.7■□□□□ 0.9
TGFBR3-203ENST00000417833 ZFYVE16Q7Z3T8 1539 aa20.7■□□□□ 0.9
TGFBR3-203ENST00000417833 MLH3Q9UHC1 1453 aa20.69■□□□□ 0.9
TGFBR3-203ENST00000417833 YEATS2Q9ULM3 1422 aa20.67■□□□□ 0.9
TGFBR3-203ENST00000417833 SYCP2Q9BX26 1530 aa20.67■□□□□ 0.9
TGFBR3-203ENST00000417833 BCORL1Q5H9F3 1711 aa20.67■□□□□ 0.9
TGFBR3-203ENST00000417833 HNRNPMP52272 730 aaKnown RBP eCLIP20.66■□□□□ 0.91e-6■■■□□ 18.2
TGFBR3-203ENST00000417833 MIA2Q96PC5 1412 aa20.65■□□□□ 0.9
TGFBR3-203ENST00000417833 ZNF644Q9H582 1327 aaPredicted RBP20.65■□□□□ 0.9
TGFBR3-203ENST00000417833 CERKQ8TCT0 537 aa20.65■□□□□ 0.9
TGFBR3-203ENST00000417833 MBD5Q9P267 1494 aa20.64■□□□□ 0.89
TGFBR3-203ENST00000417833 MYOM3Q5VTT5 1437 aa20.64■□□□□ 0.89
TGFBR3-203ENST00000417833 ILDR2Q71H61 639 aa20.64■□□□□ 0.89
TGFBR3-203ENST00000417833 ATP10AO60312 1499 aa20.63■□□□□ 0.89
TGFBR3-203ENST00000417833 MADDQ8WXG6 1647 aa20.63■□□□□ 0.89
TGFBR3-203ENST00000417833 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
TGFBR3-203ENST00000417833 DISP3Q9P2K9 1392 aa20.61■□□□□ 0.89
TGFBR3-203ENST00000417833 CAMSAP2Q08AD1 1489 aa20.61■□□□□ 0.89
TGFBR3-203ENST00000417833 KIDINS220Q9ULH0 1771 aa20.6■□□□□ 0.89
TGFBR3-203ENST00000417833 C9orf84Q5VXU9 1444 aa20.59■□□□□ 0.89
TGFBR3-203ENST00000417833 REREQ9P2R6 1566 aa20.59■□□□□ 0.89
TGFBR3-203ENST00000417833 DIP2CQ9Y2E4 1556 aa20.59■□□□□ 0.89
TGFBR3-203ENST00000417833 SPAG9O60271 1321 aaKnown RBP20.58■□□□□ 0.89
TGFBR3-203ENST00000417833 ARHGEF5Q12774 1597 aa20.57■□□□□ 0.88
TGFBR3-203ENST00000417833 ABCA6Q8N139 1617 aa20.56■□□□□ 0.88
TGFBR3-203ENST00000417833 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
TGFBR3-203ENST00000417833 INO80Q9ULG1 1556 aaPredicted RBP20.56■□□□□ 0.88
TGFBR3-203ENST00000417833 RTEL1-TNFRSF6BF6WH68 1400 aa20.56■□□□□ 0.88
TGFBR3-203ENST00000417833 MYT1LQ9UL68 1186 aa20.56■□□□□ 0.88
TGFBR3-203ENST00000417833 SIGLEC1Q9BZZ2 1709 aa20.56■□□□□ 0.88
TGFBR3-203ENST00000417833 CCDC141Q6ZP82 1450 aa20.55■□□□□ 0.88
TGFBR3-203ENST00000417833 ATP7AQ04656 1500 aa20.54■□□□□ 0.88
TGFBR3-203ENST00000417833 HSPA2P54652 639 aa20.54■□□□□ 0.88
TGFBR3-203ENST00000417833 RIMS1Q86UR5 1692 aaKnown RBP20.52■□□□□ 0.88
TGFBR3-203ENST00000417833 AGLP35573 1532 aa20.52■□□□□ 0.87
TGFBR3-203ENST00000417833 FGD6Q6ZV73 1430 aa20.52■□□□□ 0.87
TGFBR3-203ENST00000417833 TCOF1Q13428 1488 aaKnown RBP20.5■□□□□ 0.87
TGFBR3-203ENST00000417833 PTPN23Q9H3S7 1636 aa20.49■□□□□ 0.87
TGFBR3-203ENST00000417833 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
TGFBR3-203ENST00000417833 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
TGFBR3-203ENST00000417833 ADGBQ8N7X0 1667 aa20.47■□□□□ 0.87
TGFBR3-203ENST00000417833 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
TGFBR3-203ENST00000417833 A2MP01023 1474 aa20.45■□□□□ 0.86
TGFBR3-203ENST00000417833 PLXNC1O60486 1568 aa20.45■□□□□ 0.86
TGFBR3-203ENST00000417833 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
TGFBR3-203ENST00000417833 ABCC5O15440 1437 aa20.41■□□□□ 0.86
TGFBR3-203ENST00000417833 DNMT1P26358 1616 aaKnown RBP20.4■□□□□ 0.86
TGFBR3-203ENST00000417833 MLECQ14165 292 aa20.4■□□□□ 0.86
TGFBR3-203ENST00000417833 SPATA31D1Q6ZQQ2 1576 aa20.4■□□□□ 0.86
TGFBR3-203ENST00000417833 SHANK2Q9UPX8 1470 aa20.4■□□□□ 0.86
TGFBR3-203ENST00000417833 FER1L4A9Z1Z3 1794 aa20.39■□□□□ 0.85
TGFBR3-203ENST00000417833 CROCC2H7BZ55 1655 aa20.38■□□□□ 0.85
TGFBR3-203ENST00000417833 DAPK1P53355 1430 aa20.38■□□□□ 0.85
TGFBR3-203ENST00000417833 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
TGFBR3-203ENST00000417833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.34■□□□□ 0.85
TGFBR3-203ENST00000417833 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
TGFBR3-203ENST00000417833 PPARGC1BQ86YN6 1023 aaKnown RBP20.34■□□□□ 0.85
TGFBR3-203ENST00000417833 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
TGFBR3-203ENST00000417833 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
TGFBR3-203ENST00000417833 CNTLNQ9NXG0 1405 aa20.31■□□□□ 0.84
TGFBR3-203ENST00000417833 PREX1Q8TCU6 1659 aa20.31■□□□□ 0.84
TGFBR3-203ENST00000417833 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
TGFBR3-203ENST00000417833 EIF2AK4Q9P2K8 1649 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms