RNA–Protein interactions for RNA: ENST00000417762.5

SHPRH-204, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-204ENST00000417762 FAM9AQ8IZU1 332 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-204ENST00000417762 WRNQ14191 1432 aaPredicted RBP eCLIP12.43□□□□□ -0.42
SHPRH-204ENST00000417762 CABP2Q9NPB3 220 aa12.41□□□□□ -0.42
SHPRH-204ENST00000417762 CFTRP13569 1480 aa12.4□□□□□ -0.43
SHPRH-204ENST00000417762 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
SHPRH-204ENST00000417762 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
SHPRH-204ENST00000417762 SYNJ1O43426 1573 aa12.34□□□□□ -0.43
SHPRH-204ENST00000417762 SOGA1O94964 1423 aa12.32□□□□□ -0.44
SHPRH-204ENST00000417762 EEA1Q15075 1411 aa12.32□□□□□ -0.44
SHPRH-204ENST00000417762 MARVELD3Q96A59 401 aa12.31□□□□□ -0.44
SHPRH-204ENST00000417762 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
SHPRH-204ENST00000417762 G3V3G9 751 aa12.3□□□□□ -0.44
SHPRH-204ENST00000417762 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
SHPRH-204ENST00000417762 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.44
SHPRH-204ENST00000417762 EFCAB3Q8N7B9 438 aa12.26□□□□□ -0.45
SHPRH-204ENST00000417762 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
SHPRH-204ENST00000417762 PRDM2Q13029 1718 aa12.25□□□□□ -0.45
SHPRH-204ENST00000417762 CUX1P39880 1505 aa12.24□□□□□ -0.45
SHPRH-204ENST00000417762 EMP3P54852 163 aa12.23□□□□□ -0.45
SHPRH-204ENST00000417762 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
SHPRH-204ENST00000417762 RNF25Q96BH1 459 aaPredicted RBP12.2□□□□□ -0.46
SHPRH-204ENST00000417762 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
SHPRH-204ENST00000417762 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
SHPRH-204ENST00000417762 HOXB3P14651 431 aaPredicted RBP12.17□□□□□ -0.46
SHPRH-204ENST00000417762 SPNS2Q8IVW8 549 aa12.17□□□□□ -0.46
SHPRH-204ENST00000417762 NESP48681 1621 aa12.17□□□□□ -0.46
SHPRH-204ENST00000417762 LAMC3Q9Y6N6 1575 aa12.17□□□□□ -0.46
SHPRH-204ENST00000417762 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
SHPRH-204ENST00000417762 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
SHPRH-204ENST00000417762 TNIKQ9UKE5 1360 aa12.16□□□□□ -0.46
SHPRH-204ENST00000417762 SOX12O15370 315 aa12.15□□□□□ -0.46
SHPRH-204ENST00000417762 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
SHPRH-204ENST00000417762 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
SHPRH-204ENST00000417762 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
SHPRH-204ENST00000417762 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
SHPRH-204ENST00000417762 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
SHPRH-204ENST00000417762 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
SHPRH-204ENST00000417762 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
SHPRH-204ENST00000417762 MICALL2Q8IY33 904 aa12.12□□□□□ -0.47
SHPRH-204ENST00000417762 KIF21BO75037 1637 aa12.11□□□□□ -0.47
SHPRH-204ENST00000417762 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
SHPRH-204ENST00000417762 DOK7Q18PE1 504 aa12.11□□□□□ -0.47
SHPRH-204ENST00000417762 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
SHPRH-204ENST00000417762 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
SHPRH-204ENST00000417762 KIF27Q86VH2 1401 aa12.1□□□□□ -0.47
SHPRH-204ENST00000417762 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
SHPRH-204ENST00000417762 HOXB1P14653 301 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-204ENST00000417762 KRTAP3-3Q9BYR6 98 aa12.09□□□□□ -0.47
SHPRH-204ENST00000417762 KRTAP3-2Q9BYR7 98 aa12.09□□□□□ -0.47
SHPRH-204ENST00000417762 PHF8Q9UPP1 1060 aa12.08□□□□□ -0.48
SHPRH-204ENST00000417762 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.48
SHPRH-204ENST00000417762 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
SHPRH-204ENST00000417762 CEP162Q5TB80 1403 aa12.07□□□□□ -0.48
SHPRH-204ENST00000417762 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
SHPRH-204ENST00000417762 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
SHPRH-204ENST00000417762 PRXQ9BXM0 1461 aa12.06□□□□□ -0.48
SHPRH-204ENST00000417762 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
SHPRH-204ENST00000417762 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
SHPRH-204ENST00000417762 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
SHPRH-204ENST00000417762 CUX2O14529 1486 aa12.03□□□□□ -0.48
SHPRH-204ENST00000417762 TRIM26Q12899 539 aaPredicted RBP12.03□□□□□ -0.48
SHPRH-204ENST00000417762 PCGF6Q9BYE7 350 aa12.03□□□□□ -0.48
SHPRH-204ENST00000417762 IGF1RP08069 1367 aa12.03□□□□□ -0.48
SHPRH-204ENST00000417762 URB2Q14146 1524 aaKnown RBP12.02□□□□□ -0.48
SHPRH-204ENST00000417762 ERICH3Q5RHP9 1530 aa12.02□□□□□ -0.48
SHPRH-204ENST00000417762 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-204ENST00000417762 POLA1P09884 1462 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-204ENST00000417762 NLRP6P59044 892 aa12□□□□□ -0.49
SHPRH-204ENST00000417762 ZSWIM6Q9HCJ5 1215 aa12□□□□□ -0.49
SHPRH-204ENST00000417762 ERBB3P21860 1342 aa11.99□□□□□ -0.49
SHPRH-204ENST00000417762 RAD54L2Q9Y4B4 1467 aa11.99□□□□□ -0.49
SHPRH-204ENST00000417762 ABCA10Q8WWZ4 1543 aa11.99□□□□□ -0.49
SHPRH-204ENST00000417762 FBXO22Q8NEZ5 403 aa11.98□□□□□ -0.49
SHPRH-204ENST00000417762 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
SHPRH-204ENST00000417762 STK24Q9Y6E0 443 aa11.96□□□□□ -0.49
SHPRH-204ENST00000417762 CLIP1P30622 1438 aa11.95□□□□□ -0.5
SHPRH-204ENST00000417762 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
SHPRH-204ENST00000417762 ECM2O94769 699 aaPredicted RBP11.93□□□□□ -0.5
SHPRH-204ENST00000417762 GPR153Q6NV75 609 aa11.93□□□□□ -0.5
SHPRH-204ENST00000417762 STK25O00506 426 aa11.92□□□□□ -0.5
SHPRH-204ENST00000417762 VARS2Q5ST30 1063 aaKnown RBP11.92□□□□□ -0.5
SHPRH-204ENST00000417762 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
SHPRH-204ENST00000417762 MRC2Q9UBG0 1479 aa11.91□□□□□ -0.5
SHPRH-204ENST00000417762 PPARGC1BQ86YN6 1023 aaKnown RBP11.89□□□□□ -0.51
SHPRH-204ENST00000417762 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
SHPRH-204ENST00000417762 TDRD9Q8NDG6 1382 aaKnown RBP11.87□□□□□ -0.51
SHPRH-204ENST00000417762 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
SHPRH-204ENST00000417762 RANGAP1P46060 587 aaPredicted RBP11.86□□□□□ -0.51
SHPRH-204ENST00000417762 PKD2Q13563 968 aa11.86□□□□□ -0.51
SHPRH-204ENST00000417762 ZNF687Q8N1G0 1237 aa11.86□□□□□ -0.51
SHPRH-204ENST00000417762 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
SHPRH-204ENST00000417762 GAPVD1Q14C86 1478 aa11.85□□□□□ -0.51
SHPRH-204ENST00000417762 RGL2O15211 777 aa11.84□□□□□ -0.51
SHPRH-204ENST00000417762 ARSIQ5FYB1 569 aa11.84□□□□□ -0.51
SHPRH-204ENST00000417762 ABCA5Q8WWZ7 1642 aa11.84□□□□□ -0.51
SHPRH-204ENST00000417762 WDR62O43379 1518 aa11.83□□□□□ -0.52
SHPRH-204ENST00000417762 KIF3CO14782 793 aa11.83□□□□□ -0.52
SHPRH-204ENST00000417762 CUL7Q14999 1698 aa11.83□□□□□ -0.52
SHPRH-204ENST00000417762 ARAP1Q96P48 1450 aa11.82□□□□□ -0.52
SHPRH-204ENST00000417762 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms