RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 MAGI3Q5TCQ9 1506 aa10.7□□□□□ -0.7
VRK2-203ENST00000417641 NBPF8Q3BBV2 869 aa10.7□□□□□ -0.7
VRK2-203ENST00000417641 KIF7Q2M1P5 1343 aa10.7□□□□□ -0.7
VRK2-203ENST00000417641 TEX14Q8IWB6 1497 aa10.7□□□□□ -0.7
VRK2-203ENST00000417641 NBR1Q14596 966 aa10.69□□□□□ -0.7
VRK2-203ENST00000417641 NUDCQ9Y266 331 aa10.69□□□□□ -0.7
VRK2-203ENST00000417641 DHX29Q7Z478 1369 aaKnown RBP10.69□□□□□ -0.7
VRK2-203ENST00000417641 MPHOSPH9Q99550 1183 aa10.69□□□□□ -0.7
VRK2-203ENST00000417641 RRP7BPQ9NSQ0 103 aa10.68□□□□□ -0.7
VRK2-203ENST00000417641 ANKRD30BQ9BXX2 1392 aa10.68□□□□□ -0.7
VRK2-203ENST00000417641 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
VRK2-203ENST00000417641 DNMBPQ6XZF7 1577 aa10.68□□□□□ -0.7
VRK2-203ENST00000417641 POLR1AO95602 1720 aaPredicted RBP10.68□□□□□ -0.7
VRK2-203ENST00000417641 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
VRK2-203ENST00000417641 FANCD2Q9BXW9 1451 aa10.66□□□□□ -0.7
VRK2-203ENST00000417641 ANP32AP39687 249 aaKnown RBP10.65□□□□□ -0.7
VRK2-203ENST00000417641 TOPBP1Q92547 1522 aa10.65□□□□□ -0.7
VRK2-203ENST00000417641 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
VRK2-203ENST00000417641 MIA2Q96PC5 1412 aa10.64□□□□□ -0.71
VRK2-203ENST00000417641 CCDC136Q96JN2 1154 aa10.63□□□□□ -0.71
VRK2-203ENST00000417641 ANO8Q9HCE9 1232 aaPredicted RBP10.63□□□□□ -0.71
VRK2-203ENST00000417641 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
VRK2-203ENST00000417641 FOXD1Q16676 465 aa10.61□□□□□ -0.71
VRK2-203ENST00000417641 MBD5Q9P267 1494 aa10.61□□□□□ -0.71
VRK2-203ENST00000417641 ROCK1Q13464 1354 aa10.61□□□□□ -0.71
VRK2-203ENST00000417641 PNISRQ8TF01 805 aaKnown RBP10.61□□□□□ -0.71
VRK2-203ENST00000417641 KIF21AQ7Z4S6 1674 aa10.6□□□□□ -0.71
VRK2-203ENST00000417641 RTL5Q5HYW3 569 aaPredicted RBP10.6□□□□□ -0.71
VRK2-203ENST00000417641 BCORL1Q5H9F3 1711 aa10.59□□□□□ -0.71
VRK2-203ENST00000417641 WASHC2CQ9Y4E1 1318 aa10.59□□□□□ -0.71
VRK2-203ENST00000417641 LRPPRCP42704 1394 aaKnown RBP10.59□□□□□ -0.71
VRK2-203ENST00000417641 ARID4BQ4LE39 1312 aaPredicted RBP10.58□□□□□ -0.71
VRK2-203ENST00000417641 IL27Q8NEV9 243 aa10.58□□□□□ -0.72
VRK2-203ENST00000417641 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
VRK2-203ENST00000417641 TCERG1O14776 1098 aaKnown RBP10.57□□□□□ -0.72
VRK2-203ENST00000417641 USP35Q9P2H5 1018 aa10.57□□□□□ -0.72
VRK2-203ENST00000417641 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
VRK2-203ENST00000417641 DAPK1P53355 1430 aa10.56□□□□□ -0.72
VRK2-203ENST00000417641 ABCC5O15440 1437 aa10.56□□□□□ -0.72
VRK2-203ENST00000417641 PZPP20742 1482 aa10.55□□□□□ -0.72
VRK2-203ENST00000417641 RRP1P56182 461 aaKnown RBP10.55□□□□□ -0.72
VRK2-203ENST00000417641 BACH2Q9BYV9 841 aa10.55□□□□□ -0.72
VRK2-203ENST00000417641 PDE4AP27815 886 aa10.54□□□□□ -0.72
VRK2-203ENST00000417641 KDM5CP41229 1560 aa10.54□□□□□ -0.72
VRK2-203ENST00000417641 DNMT1P26358 1616 aaKnown RBP10.54□□□□□ -0.72
VRK2-203ENST00000417641 NESP48681 1621 aa10.54□□□□□ -0.72
VRK2-203ENST00000417641 MS4A1P11836 297 aa10.54□□□□□ -0.72
VRK2-203ENST00000417641 USP47Q96K76 1375 aa10.53□□□□□ -0.72
VRK2-203ENST00000417641 EXOC6Q8TAG9 804 aa10.53□□□□□ -0.72
VRK2-203ENST00000417641 URB2Q14146 1524 aaKnown RBP10.53□□□□□ -0.72
VRK2-203ENST00000417641 GAPVD1Q14C86 1478 aa10.52□□□□□ -0.72
VRK2-203ENST00000417641 ROCK2O75116 1388 aaKnown RBP10.52□□□□□ -0.72
VRK2-203ENST00000417641 UHRF1BP1Q6BDS2 1440 aa10.52□□□□□ -0.73
VRK2-203ENST00000417641 BRD4O60885 1362 aaPredicted RBP10.52□□□□□ -0.73
VRK2-203ENST00000417641 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.73
VRK2-203ENST00000417641 WDR62O43379 1518 aa10.52□□□□□ -0.73
VRK2-203ENST00000417641 KIF14Q15058 1648 aa10.51□□□□□ -0.73
VRK2-203ENST00000417641 TDRD9Q8NDG6 1382 aaKnown RBP10.51□□□□□ -0.73
VRK2-203ENST00000417641 CDK13Q14004 1512 aaKnown RBP10.51□□□□□ -0.73
VRK2-203ENST00000417641 SLC4A1APQ9BWU0 796 aaKnown RBP10.51□□□□□ -0.73
VRK2-203ENST00000417641 PPM1GO15355 546 aaPredicted RBP10.5□□□□□ -0.73
VRK2-203ENST00000417641 NEFMP07197 916 aa10.5□□□□□ -0.73
VRK2-203ENST00000417641 KTN1Q86UP2 1357 aaKnown RBP10.5□□□□□ -0.73
VRK2-203ENST00000417641 KIF15Q9NS87 1388 aa10.5□□□□□ -0.73
VRK2-203ENST00000417641 KIAA1107Q9UPP5 1409 aa10.49□□□□□ -0.73
VRK2-203ENST00000417641 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
VRK2-203ENST00000417641 LAS1LQ9Y4W2 734 aaKnown RBP10.49□□□□□ -0.73
VRK2-203ENST00000417641 RALGAPBQ86X10 1494 aa10.49□□□□□ -0.73
VRK2-203ENST00000417641 POTEDQ86YR6 584 aa10.48□□□□□ -0.73
VRK2-203ENST00000417641 MYBBP1AQ9BQG0 1328 aaKnown RBP10.48□□□□□ -0.73
VRK2-203ENST00000417641 RCAN3Q9UKA8 241 aa10.48□□□□□ -0.73
VRK2-203ENST00000417641 NPM2Q86SE8 214 aaKnown RBP10.47□□□□□ -0.73
VRK2-203ENST00000417641 SENP3-EIF4A1A0A087X0R7 540 aa10.47□□□□□ -0.73
VRK2-203ENST00000417641 PDE3BQ13370 1112 aa10.47□□□□□ -0.73
VRK2-203ENST00000417641 RALBP1Q15311 655 aa10.47□□□□□ -0.73
VRK2-203ENST00000417641 E9PCH4 1651 aa10.47□□□□□ -0.73
VRK2-203ENST00000417641 ZNF644Q9H582 1327 aaPredicted RBP10.46□□□□□ -0.73
VRK2-203ENST00000417641 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.74
VRK2-203ENST00000417641 ADGRL2O95490 1459 aa10.45□□□□□ -0.74
VRK2-203ENST00000417641 INSRP06213 1382 aa10.45□□□□□ -0.74
VRK2-203ENST00000417641 IQGAP2Q13576 1575 aa10.44□□□□□ -0.74
VRK2-203ENST00000417641 CNGB1Q14028 1251 aaPredicted RBP10.44□□□□□ -0.74
VRK2-203ENST00000417641 PARD3Q8TEW0 1356 aa10.43□□□□□ -0.74
VRK2-203ENST00000417641 ARHGEF12Q9NZN5 1544 aa10.43□□□□□ -0.74
VRK2-203ENST00000417641 ZMYM4Q5VZL5 1548 aa10.43□□□□□ -0.74
VRK2-203ENST00000417641 DDRGK1Q96HY6 314 aa10.43□□□□□ -0.74
VRK2-203ENST00000417641 GSE1Q14687 1217 aa10.42□□□□□ -0.74
VRK2-203ENST00000417641 POLR3GLQ9BT43 218 aa10.42□□□□□ -0.74
VRK2-203ENST00000417641 TARBP1Q13395 1621 aaKnown RBP10.42□□□□□ -0.74
VRK2-203ENST00000417641 PKD2Q13563 968 aa10.41□□□□□ -0.74
VRK2-203ENST00000417641 NFKBIBQ15653 356 aa10.41□□□□□ -0.74
VRK2-203ENST00000417641 BRPF3Q9ULD4 1205 aa10.41□□□□□ -0.74
VRK2-203ENST00000417641 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.74
VRK2-203ENST00000417641 NLRP13Q86W25 1043 aa10.4□□□□□ -0.74
VRK2-203ENST00000417641 KDM2BQ8NHM5 1336 aa10.4□□□□□ -0.74
VRK2-203ENST00000417641 CDCA7LQ96GN5 454 aa10.4□□□□□ -0.74
VRK2-203ENST00000417641 ADGBQ8N7X0 1667 aa10.4□□□□□ -0.74
VRK2-203ENST00000417641 BLMP54132 1417 aaPredicted RBP10.4□□□□□ -0.74
VRK2-203ENST00000417641 CAMSAP2Q08AD1 1489 aa10.39□□□□□ -0.75
VRK2-203ENST00000417641 ST20-MTHFSA0A0A6YYL1 179 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms