RNA–Protein interactions for RNA: ENST00000416593.1

AC004012.1-201, humanhuman

TSL 4 BASIC

Gene AC004012.1, Length 534 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004012.1-201ENST00000416593 RSF1Q96T23 1441 aaPredicted RBP12.6□□□□□ -0.39
AC004012.1-201ENST00000416593 SOX12O15370 315 aa12.58□□□□□ -0.4
AC004012.1-201ENST00000416593 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
AC004012.1-201ENST00000416593 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
AC004012.1-201ENST00000416593 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
AC004012.1-201ENST00000416593 GTPBP6O43824 516 aaPredicted RBP12.55□□□□□ -0.4
AC004012.1-201ENST00000416593 IER5LQ5T953 404 aa12.55□□□□□ -0.4
AC004012.1-201ENST00000416593 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
AC004012.1-201ENST00000416593 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
AC004012.1-201ENST00000416593 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
AC004012.1-201ENST00000416593 POTEFA5A3E0 1075 aa12.54□□□□□ -0.4
AC004012.1-201ENST00000416593 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.54□□□□□ -0.4
AC004012.1-201ENST00000416593 COLQQ9Y215 455 aaPredicted RBP12.54□□□□□ -0.4
AC004012.1-201ENST00000416593 PAXIP1Q6ZW49 1069 aaPredicted RBP12.53□□□□□ -0.4
AC004012.1-201ENST00000416593 ILDR1Q86SU0 546 aaPredicted RBP12.53□□□□□ -0.4
AC004012.1-201ENST00000416593 NLRP6P59044 892 aa12.52□□□□□ -0.41
AC004012.1-201ENST00000416593 CFAP44Q96MT7 982 aa12.52□□□□□ -0.41
AC004012.1-201ENST00000416593 C7P10643 843 aa12.51□□□□□ -0.41
AC004012.1-201ENST00000416593 PDCD7Q8N8D1 485 aaKnown RBP12.51□□□□□ -0.41
AC004012.1-201ENST00000416593 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
AC004012.1-201ENST00000416593 RIMBP3CA6NJZ7 1639 aa12.49□□□□□ -0.41
AC004012.1-201ENST00000416593 RIMBP3BA6NNM3 1639 aa12.49□□□□□ -0.41
AC004012.1-201ENST00000416593 RIMBP3Q9UFD9 1639 aa12.49□□□□□ -0.41
AC004012.1-201ENST00000416593 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
AC004012.1-201ENST00000416593 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
AC004012.1-201ENST00000416593 SEC24BO95487 1268 aa12.48□□□□□ -0.41
AC004012.1-201ENST00000416593 PLCG2P16885 1265 aa12.48□□□□□ -0.41
AC004012.1-201ENST00000416593 PLCB2Q00722 1185 aa12.48□□□□□ -0.41
AC004012.1-201ENST00000416593 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
AC004012.1-201ENST00000416593 PPP1R37O75864 691 aa12.47□□□□□ -0.41
AC004012.1-201ENST00000416593 ZNF608Q9ULD9 1512 aaPredicted RBP12.46□□□□□ -0.42
AC004012.1-201ENST00000416593 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.42
AC004012.1-201ENST00000416593 TOPBP1Q92547 1522 aa12.45□□□□□ -0.42
AC004012.1-201ENST00000416593 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
AC004012.1-201ENST00000416593 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
AC004012.1-201ENST00000416593 ARHGEF11O15085 1522 aa12.43□□□□□ -0.42
AC004012.1-201ENST00000416593 RYDENQ9NUL5 291 aaKnown RBP12.42□□□□□ -0.42
AC004012.1-201ENST00000416593 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
AC004012.1-201ENST00000416593 CHD1O14646 1710 aa12.39□□□□□ -0.43
AC004012.1-201ENST00000416593 TARBP1Q13395 1621 aaKnown RBP12.38□□□□□ -0.43
AC004012.1-201ENST00000416593 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
AC004012.1-201ENST00000416593 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
AC004012.1-201ENST00000416593 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
AC004012.1-201ENST00000416593 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
AC004012.1-201ENST00000416593 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
AC004012.1-201ENST00000416593 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
AC004012.1-201ENST00000416593 AQRO60306 1485 aaKnown RBP eCLIP12.31□□□□□ -0.44
AC004012.1-201ENST00000416593 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
AC004012.1-201ENST00000416593 TMEM121BQ9BXQ6 578 aaPredicted RBP12.3□□□□□ -0.44
AC004012.1-201ENST00000416593 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
AC004012.1-201ENST00000416593 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
AC004012.1-201ENST00000416593 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
AC004012.1-201ENST00000416593 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
AC004012.1-201ENST00000416593 CYB5RLQ6IPT4 315 aa12.27□□□□□ -0.45
AC004012.1-201ENST00000416593 G3V3G9 751 aa12.25□□□□□ -0.45
AC004012.1-201ENST00000416593 CLASP1Q7Z460 1538 aa12.23□□□□□ -0.45
AC004012.1-201ENST00000416593 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
AC004012.1-201ENST00000416593 SOGA1O94964 1423 aa12.22□□□□□ -0.45
AC004012.1-201ENST00000416593 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.46
AC004012.1-201ENST00000416593 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.46
AC004012.1-201ENST00000416593 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.46
AC004012.1-201ENST00000416593 LHX8Q68G74 356 aa12.2□□□□□ -0.46
AC004012.1-201ENST00000416593 TMEM92Q6UXU6 159 aa12.2□□□□□ -0.46
AC004012.1-201ENST00000416593 SYNJ1O43426 1573 aa12.2□□□□□ -0.46
AC004012.1-201ENST00000416593 TDRD9Q8NDG6 1382 aaKnown RBP12.19□□□□□ -0.46
AC004012.1-201ENST00000416593 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
AC004012.1-201ENST00000416593 CUX1P39880 1505 aa12.17□□□□□ -0.46
AC004012.1-201ENST00000416593 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
AC004012.1-201ENST00000416593 GRIN2BQ13224 1484 aa12.17□□□□□ -0.46
AC004012.1-201ENST00000416593 PBRM1Q86U86 1689 aa12.16□□□□□ -0.46
AC004012.1-201ENST00000416593 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
AC004012.1-201ENST00000416593 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
AC004012.1-201ENST00000416593 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
AC004012.1-201ENST00000416593 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
AC004012.1-201ENST00000416593 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.14□□□□□ -0.47
AC004012.1-201ENST00000416593 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
AC004012.1-201ENST00000416593 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
AC004012.1-201ENST00000416593 KIF3CO14782 793 aa12.12□□□□□ -0.47
AC004012.1-201ENST00000416593 SCUBE2Q9NQ36 999 aa12.12□□□□□ -0.47
AC004012.1-201ENST00000416593 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
AC004012.1-201ENST00000416593 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
AC004012.1-201ENST00000416593 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
AC004012.1-201ENST00000416593 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
AC004012.1-201ENST00000416593 TMC2Q8TDI7 906 aa12.09□□□□□ -0.47
AC004012.1-201ENST00000416593 GPHNQ9NQX3 736 aaPredicted RBP12.09□□□□□ -0.47
AC004012.1-201ENST00000416593 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.48
AC004012.1-201ENST00000416593 PDE4AP27815 886 aa12.08□□□□□ -0.48
AC004012.1-201ENST00000416593 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
AC004012.1-201ENST00000416593 SLAIN1Q8ND83 568 aa12.07□□□□□ -0.48
AC004012.1-201ENST00000416593 VSIG10Q8N0Z9 540 aa12.06□□□□□ -0.48
AC004012.1-201ENST00000416593 DSG2Q14126 1118 aa12.05□□□□□ -0.48
AC004012.1-201ENST00000416593 MFSD10Q14728 455 aa12.05□□□□□ -0.48
AC004012.1-201ENST00000416593 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
AC004012.1-201ENST00000416593 FOXK1P85037 733 aa12.02□□□□□ -0.49
AC004012.1-201ENST00000416593 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
AC004012.1-201ENST00000416593 GRIN2AQ12879 1464 aa12.02□□□□□ -0.49
AC004012.1-201ENST00000416593 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
AC004012.1-201ENST00000416593 PLPP6Q8IY26 295 aa11.99□□□□□ -0.49
AC004012.1-201ENST00000416593 NUP160Q12769 1436 aa11.99□□□□□ -0.49
AC004012.1-201ENST00000416593 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms