RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ZMYM4Q5VZL5 1548 aa40.27■■■■■ 4.04
HLA-C-204ENST00000415537 POGZQ7Z3K3 1410 aa40.24■■■■■ 4.03
HLA-C-204ENST00000415537 ZFYVE16Q7Z3T8 1539 aa40.22■■■■■ 4.03
HLA-C-204ENST00000415537 MAGI2Q86UL8 1455 aa40.22■■■■■ 4.03
HLA-C-204ENST00000415537 ADAMTSL3P82987 1691 aa40.21■■■■■ 4.03
HLA-C-204ENST00000415537 BCORL1Q5H9F3 1711 aa40.2■■■■■ 4.03
HLA-C-204ENST00000415537 CDC42BPBQ9Y5S2 1711 aa40.19■■■■■ 4.02
HLA-C-204ENST00000415537 YEATS2Q9ULM3 1422 aa40.15■■■■■ 4.02
HLA-C-204ENST00000415537 PREX2Q70Z35 1606 aa40.13■■■■■ 4.02
HLA-C-204ENST00000415537 CEP162Q5TB80 1403 aa40.13■■■■■ 4.01
HLA-C-204ENST00000415537 ZNF518AQ6AHZ1 1483 aa40.1■■■■■ 4.01
HLA-C-204ENST00000415537 PTPRMP28827 1452 aa40.07■■■■■ 4.01
HLA-C-204ENST00000415537 CDC42BPAQ5VT25 1732 aa40.07■■■■■ 4
HLA-C-204ENST00000415537 HECW2Q9P2P5 1572 aa40.06■■■■■ 4
HLA-C-204ENST00000415537 MADDQ8WXG6 1647 aa40.06■■■■■ 4
HLA-C-204ENST00000415537 AFAP1Q8N556 730 aa40.04■■■■■ 4
HLA-C-204ENST00000415537 MYT1LQ9UL68 1186 aa40.03■■■■■ 4
HLA-C-204ENST00000415537 ATP10AO60312 1499 aa40■■■■□ 3.99
HLA-C-204ENST00000415537 SIGLEC1Q9BZZ2 1709 aa39.99■■■■□ 3.99
HLA-C-204ENST00000415537 KDM5CP41229 1560 aa39.99■■■■□ 3.99
HLA-C-204ENST00000415537 MTUS2Q5JR59 1369 aa39.98■■■■□ 3.99
HLA-C-204ENST00000415537 ABCC1P33527 1531 aa39.97■■■■□ 3.99
HLA-C-204ENST00000415537 RIMS1Q86UR5 1692 aaKnown RBP39.96■■■■□ 3.99
HLA-C-204ENST00000415537 C9orf84Q5VXU9 1444 aa39.96■■■■□ 3.99
HLA-C-204ENST00000415537 LOC105371045A0A1W2PR82 267 aa39.95■■■■□ 3.99
HLA-C-204ENST00000415537 MLECQ14165 292 aa39.94■■■■□ 3.98
HLA-C-204ENST00000415537 ITSN2Q9NZM3 1697 aa39.94■■■■□ 3.98
HLA-C-204ENST00000415537 ZNF777Q9ULD5 760 aaPredicted RBP39.93■■■■□ 3.98
HLA-C-204ENST00000415537 GPATCH8Q9UKJ3 1502 aaKnown RBP39.91■■■■□ 3.98
HLA-C-204ENST00000415537 ARHGEF12Q9NZN5 1544 aa39.9■■■■□ 3.98
HLA-C-204ENST00000415537 TRAPPC8Q9Y2L5 1435 aa39.89■■■■□ 3.98
HLA-C-204ENST00000415537 CCNB3Q8WWL7 1395 aa39.88■■■■□ 3.97
HLA-C-204ENST00000415537 MLH3Q9UHC1 1453 aa39.86■■■■□ 3.97
HLA-C-204ENST00000415537 CFDP1Q9UEE9 299 aaPredicted RBP39.85■■■■□ 3.97
HLA-C-204ENST00000415537 FER1L4A9Z1Z3 1794 aa39.84■■■■□ 3.97
HLA-C-204ENST00000415537 SAMD9LQ8IVG5 1584 aa39.84■■■■□ 3.97
HLA-C-204ENST00000415537 EHBP1L1Q8N3D4 1523 aa39.83■■■■□ 3.97
HLA-C-204ENST00000415537 DIP2CQ9Y2E4 1556 aa39.82■■■■□ 3.97
HLA-C-204ENST00000415537 PLPPR3Q6T4P5 718 aa39.79■■■■□ 3.96
HLA-C-204ENST00000415537 ABCA6Q8N139 1617 aa39.78■■■■□ 3.96
HLA-C-204ENST00000415537 SYCP2Q9BX26 1530 aa39.77■■■■□ 3.96
HLA-C-204ENST00000415537 HNRNPMP52272 730 aaKnown RBP eCLIP39.75■■■■□ 3.95
HLA-C-204ENST00000415537 PLEKHH2Q8IVE3 1493 aa39.75■■■■□ 3.95
HLA-C-204ENST00000415537 REREQ9P2R6 1566 aa39.74■■■■□ 3.95
HLA-C-204ENST00000415537 KIDINS220Q9ULH0 1771 aa39.73■■■■□ 3.95
HLA-C-204ENST00000415537 KIAA1107Q9UPP5 1409 aa39.71■■■■□ 3.95
HLA-C-204ENST00000415537 TIAM1Q13009 1591 aa39.71■■■■□ 3.95
HLA-C-204ENST00000415537 VPS8Q8N3P4 1428 aa39.69■■■■□ 3.94
HLA-C-204ENST00000415537 SPAG9O60271 1321 aaKnown RBP39.67■■■■□ 3.94
HLA-C-204ENST00000415537 SUPT6HQ7KZ85 1726 aaKnown RBP39.65■■■■□ 3.94
HLA-C-204ENST00000415537 AGLP35573 1532 aa39.62■■■■□ 3.93
HLA-C-204ENST00000415537 LMTK3Q96Q04 1460 aa39.62■■■■□ 3.93
HLA-C-204ENST00000415537 NCOA2Q15596 1464 aa39.57■■■■□ 3.93
HLA-C-204ENST00000415537 ZNF644Q9H582 1327 aaPredicted RBP39.57■■■■□ 3.92
HLA-C-204ENST00000415537 ATP7AQ04656 1500 aa39.56■■■■□ 3.92
HLA-C-204ENST00000415537 ESF1Q9H501 851 aaKnown RBP39.56■■■■□ 3.92
HLA-C-204ENST00000415537 INO80Q9ULG1 1556 aaPredicted RBP39.51■■■■□ 3.92
HLA-C-204ENST00000415537 CEBPAP49715 358 aaPredicted RBP39.51■■■■□ 3.92
HLA-C-204ENST00000415537 LRRC9Q6ZRR7 1453 aa39.49■■■■□ 3.91
HLA-C-204ENST00000415537 MBD5Q9P267 1494 aa39.46■■■■□ 3.91
HLA-C-204ENST00000415537 MAP3K1Q13233 1512 aa39.44■■■■□ 3.9
HLA-C-204ENST00000415537 HSPA2P54652 639 aa39.43■■■■□ 3.9
HLA-C-204ENST00000415537 PREX1Q8TCU6 1659 aa39.42■■■■□ 3.9
HLA-C-204ENST00000415537 A2MP01023 1474 aa39.42■■■■□ 3.9
HLA-C-204ENST00000415537 CAMSAP2Q08AD1 1489 aa39.41■■■■□ 3.9
HLA-C-204ENST00000415537 ADGBQ8N7X0 1667 aa39.4■■■■□ 3.9
HLA-C-204ENST00000415537 C3P01024 1663 aa39.39■■■■□ 3.9
HLA-C-204ENST00000415537 SETD1BQ9UPS6 1966 aaKnown RBP39.39■■■■□ 3.9
HLA-C-204ENST00000415537 CNTLNQ9NXG0 1405 aa39.38■■■■□ 3.89
HLA-C-204ENST00000415537 RSPH4AQ5TD94 716 aa39.37■■■■□ 3.89
HLA-C-204ENST00000415537 PLXNC1O60486 1568 aa39.37■■■■□ 3.89
HLA-C-204ENST00000415537 KANK4Q5T7N3 995 aaPredicted RBP39.36■■■■□ 3.89
HLA-C-204ENST00000415537 RTEL1-TNFRSF6BF6WH68 1400 aa39.36■■■■□ 3.89
HLA-C-204ENST00000415537 APLP2Q06481 763 aa39.35■■■■□ 3.89
HLA-C-204ENST00000415537 CCDC141Q6ZP82 1450 aa39.35■■■■□ 3.89
HLA-C-204ENST00000415537 UHRF1BP1Q6BDS2 1440 aa39.3■■■■□ 3.88
HLA-C-204ENST00000415537 GGT6Q6P531 493 aa39.28■■■■□ 3.88
HLA-C-204ENST00000415537 ILDR1Q86SU0 546 aaPredicted RBP39.28■■■■□ 3.88
HLA-C-204ENST00000415537 MROH2AA6NES4 1674 aa39.27■■■■□ 3.88
HLA-C-204ENST00000415537 ARHGEF5Q12774 1597 aa39.25■■■■□ 3.87
HLA-C-204ENST00000415537 TSPY4P0CV99 314 aa39.24■■■■□ 3.87
HLA-C-204ENST00000415537 TSPY10P0CW01 314 aa39.24■■■■□ 3.87
HLA-C-204ENST00000415537 CLTCQ00610 1675 aaKnown RBP39.22■■■■□ 3.87
HLA-C-204ENST00000415537 ZMYM3Q14202 1370 aa39.21■■■■□ 3.87
HLA-C-204ENST00000415537 DHX29Q7Z478 1369 aaKnown RBP39.21■■■■□ 3.87
HLA-C-204ENST00000415537 MYOM3Q5VTT5 1437 aa39.2■■■■□ 3.87
HLA-C-204ENST00000415537 PPP6R1Q9UPN7 881 aa39.18■■■■□ 3.86
HLA-C-204ENST00000415537 MIA2Q96PC5 1412 aa39.17■■■■□ 3.86
HLA-C-204ENST00000415537 NPATQ14207 1427 aa39.12■■■■□ 3.85
HLA-C-204ENST00000415537 KIF3BO15066 747 aa39.11■■■■□ 3.85
HLA-C-204ENST00000415537 MAST1Q9Y2H9 1570 aa39.04■■■■□ 3.84
HLA-C-204ENST00000415537 STRCQ7RTU9 1775 aa39.04■■■■□ 3.84
HLA-C-204ENST00000415537 DMRT2Q9Y5R5 561 aa39.04■■■■□ 3.84
HLA-C-204ENST00000415537 PTPRKQ15262 1439 aa38.98■■■■□ 3.83
HLA-C-204ENST00000415537 PTPN23Q9H3S7 1636 aa38.97■■■■□ 3.83
HLA-C-204ENST00000415537 FBXO41Q8TF61 875 aa38.96■■■■□ 3.83
HLA-C-204ENST00000415537 WASHC2CQ9Y4E1 1318 aa38.94■■■■□ 3.82
HLA-C-204ENST00000415537 KDM5DQ9BY66 1539 aa38.94■■■■□ 3.82
HLA-C-204ENST00000415537 FAM135AQ9P2D6 1515 aa38.94■■■■□ 3.82
HLA-C-204ENST00000415537 MYO3AQ8NEV4 1616 aa38.92■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms