RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 PLCG2P16885 1265 aa15.57■□□□□ 0.08
TRA2B-204ENST00000414862 DPY19L2Q6NUT2 758 aa15.57■□□□□ 0.08
TRA2B-204ENST00000414862 SEC24BO95487 1268 aa15.56■□□□□ 0.08
TRA2B-204ENST00000414862 C7P10643 843 aa15.56■□□□□ 0.08
TRA2B-204ENST00000414862 CADPS2Q86UW7 1296 aa15.53■□□□□ 0.08
TRA2B-204ENST00000414862 METRNQ9UJH8 293 aa15.52■□□□□ 0.08
TRA2B-204ENST00000414862 COLQQ9Y215 455 aaPredicted RBP15.52■□□□□ 0.08
TRA2B-204ENST00000414862 POTEFA5A3E0 1075 aa15.47■□□□□ 0.07
TRA2B-204ENST00000414862 NCAPD3P42695 1498 aa15.46■□□□□ 0.06
TRA2B-204ENST00000414862 G3V3G9 751 aa15.43■□□□□ 0.06
TRA2B-204ENST00000414862 MICALL2Q8IY33 904 aa15.43■□□□□ 0.06
TRA2B-204ENST00000414862 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
TRA2B-204ENST00000414862 BOLA1Q9Y3E2 137 aa15.43■□□□□ 0.06
TRA2B-204ENST00000414862 TMEM121BQ9BXQ6 578 aaPredicted RBP15.38■□□□□ 0.05
TRA2B-204ENST00000414862 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
TRA2B-204ENST00000414862 WDR70Q9NW82 654 aa15.36■□□□□ 0.05
TRA2B-204ENST00000414862 PDE4AP27815 886 aa15.35■□□□□ 0.05
TRA2B-204ENST00000414862 NCKAP5LQ9HCH0 1330 aa15.35■□□□□ 0.05
TRA2B-204ENST00000414862 HMGXB3Q12766 1538 aa15.33■□□□□ 0.05
TRA2B-204ENST00000414862 SMARCA2P51531 1590 aa15.33■□□□□ 0.05
TRA2B-204ENST00000414862 CRISPLD2Q9H0B8 497 aa15.33■□□□□ 0.04
TRA2B-204ENST00000414862 LARP6Q9BRS8 491 aaKnown RBP15.32■□□□□ 0.04
TRA2B-204ENST00000414862 NESP48681 1621 aa15.29■□□□□ 0.04
TRA2B-204ENST00000414862 GPHNQ9NQX3 736 aaPredicted RBP15.26■□□□□ 0.03
TRA2B-204ENST00000414862 TMC2Q8TDI7 906 aa15.25■□□□□ 0.03
TRA2B-204ENST00000414862 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
TRA2B-204ENST00000414862 MFSD10Q14728 455 aa15.24■□□□□ 0.03
TRA2B-204ENST00000414862 DDX27Q96GQ7 796 aaKnown RBP15.24■□□□□ 0.03
TRA2B-204ENST00000414862 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
TRA2B-204ENST00000414862 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
TRA2B-204ENST00000414862 C3orf67Q6ZVT6 689 aa15.23■□□□□ 0.03
TRA2B-204ENST00000414862 C2orf72A6NCS6 295 aa15.19■□□□□ 0.02
TRA2B-204ENST00000414862 TMEM92Q6UXU6 159 aa15.19■□□□□ 0.02
TRA2B-204ENST00000414862 E2F4Q16254 413 aa15.18■□□□□ 0.02
TRA2B-204ENST00000414862 P3H3Q8IVL6 736 aa15.18■□□□□ 0.02
TRA2B-204ENST00000414862 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
TRA2B-204ENST00000414862 POTEB2H3BUK9 544 aa15.17■□□□□ 0.02
TRA2B-204ENST00000414862 KIF3CO14782 793 aa15.17■□□□□ 0.02
TRA2B-204ENST00000414862 PPP1R15BQ5SWA1 713 aa15.17■□□□□ 0.02
TRA2B-204ENST00000414862 DSG2Q14126 1118 aa15.16■□□□□ 0.02
TRA2B-204ENST00000414862 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
TRA2B-204ENST00000414862 KCNV2Q8TDN2 545 aa15.15■□□□□ 0.02
TRA2B-204ENST00000414862 BCANQ96GW7 911 aa15.15■□□□□ 0.02
TRA2B-204ENST00000414862 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.15■□□□□ 0.02
TRA2B-204ENST00000414862 POTEJP0CG39 1038 aa15.14■□□□□ 0.01
TRA2B-204ENST00000414862 FOXK1P85037 733 aa15.14■□□□□ 0.01
TRA2B-204ENST00000414862 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
TRA2B-204ENST00000414862 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
TRA2B-204ENST00000414862 PLPP6Q8IY26 295 aa15.1■□□□□ 0.01
TRA2B-204ENST00000414862 CAMK2BQ13554 666 aa15.08■□□□□ 0
TRA2B-204ENST00000414862 NBR1Q14596 966 aa15.07■□□□□ 0
TRA2B-204ENST00000414862 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
TRA2B-204ENST00000414862 MAMSTRQ6ZN01 415 aa15.05■□□□□ -0
TRA2B-204ENST00000414862 ARHGEF1Q92888 912 aaKnown RBP15.05■□□□□ -0
TRA2B-204ENST00000414862 SCUBE2Q9NQ36 999 aa15.03■□□□□ -0
TRA2B-204ENST00000414862 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
TRA2B-204ENST00000414862 EMILIN3Q9NT22 766 aa14.99□□□□□ -0.01
TRA2B-204ENST00000414862 SLAIN1Q8ND83 568 aa14.98□□□□□ -0.01
TRA2B-204ENST00000414862 ARIH1Q9Y4X5 557 aaPredicted RBP14.98□□□□□ -0.01
TRA2B-204ENST00000414862 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
TRA2B-204ENST00000414862 WDR62O43379 1518 aa14.97□□□□□ -0.01
TRA2B-204ENST00000414862 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
TRA2B-204ENST00000414862 DPYSL4O14531 572 aa14.92□□□□□ -0.02
TRA2B-204ENST00000414862 LHX8Q68G74 356 aa14.92□□□□□ -0.02
TRA2B-204ENST00000414862 UPF1Q92900 1129 aaKnown RBP eCLIP14.91□□□□□ -0.02
TRA2B-204ENST00000414862 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
TRA2B-204ENST00000414862 OXER1Q8TDS5 423 aa14.89□□□□□ -0.03
TRA2B-204ENST00000414862 MAP3K9P80192 1104 aa14.88□□□□□ -0.03
TRA2B-204ENST00000414862 SLC34A2O95436 690 aa14.87□□□□□ -0.03
TRA2B-204ENST00000414862 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
TRA2B-204ENST00000414862 SEMA3EO15041 775 aa14.85□□□□□ -0.03
TRA2B-204ENST00000414862 PTCD2Q8WV60 388 aaKnown RBP14.85□□□□□ -0.03
TRA2B-204ENST00000414862 SPDYE16A6NNV3 312 aaPredicted RBP14.83□□□□□ -0.04
TRA2B-204ENST00000414862 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
TRA2B-204ENST00000414862 TBC1D12O60347 775 aa14.82□□□□□ -0.04
TRA2B-204ENST00000414862 PDIA6Q15084 440 aa14.82□□□□□ -0.04
TRA2B-204ENST00000414862 DOK7Q18PE1 504 aa14.8□□□□□ -0.04
TRA2B-204ENST00000414862 TESPA1A2RU30 521 aaPredicted RBP14.79□□□□□ -0.04
TRA2B-204ENST00000414862 HOXB3P14651 431 aaPredicted RBP14.79□□□□□ -0.04
TRA2B-204ENST00000414862 PCDHGA4Q9Y5G9 962 aa14.77□□□□□ -0.05
TRA2B-204ENST00000414862 EVI5O60447 810 aa14.75□□□□□ -0.05
TRA2B-204ENST00000414862 TULP1O00294 542 aaPredicted RBP14.74□□□□□ -0.05
TRA2B-204ENST00000414862 RIMBP2O15034 1052 aa14.74□□□□□ -0.05
TRA2B-204ENST00000414862 SNPHO15079 494 aa14.74□□□□□ -0.05
TRA2B-204ENST00000414862 CFTRP13569 1480 aa14.74□□□□□ -0.05
TRA2B-204ENST00000414862 WIZO95785 1651 aa14.74□□□□□ -0.05
TRA2B-204ENST00000414862 MLLT3P42568 568 aaPredicted RBP14.72□□□□□ -0.05
TRA2B-204ENST00000414862 SMYD5Q6GMV2 418 aa14.72□□□□□ -0.05
TRA2B-204ENST00000414862 ZNF710Q8N1W2 664 aa14.72□□□□□ -0.05
TRA2B-204ENST00000414862 ZNF316A6NFI3 1004 aaPredicted RBP14.71□□□□□ -0.05
TRA2B-204ENST00000414862 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRA2B-204ENST00000414862 ZSWIM6Q9HCJ5 1215 aa14.69□□□□□ -0.06
TRA2B-204ENST00000414862 URB2Q14146 1524 aaKnown RBP14.69□□□□□ -0.06
TRA2B-204ENST00000414862 ARSIQ5FYB1 569 aa14.68□□□□□ -0.06
TRA2B-204ENST00000414862 ANO8Q9HCE9 1232 aaPredicted RBP14.68□□□□□ -0.06
TRA2B-204ENST00000414862 RIMBP3CA6NJZ7 1639 aa14.67□□□□□ -0.06
TRA2B-204ENST00000414862 RIMBP3BA6NNM3 1639 aa14.67□□□□□ -0.06
TRA2B-204ENST00000414862 RIMBP3Q9UFD9 1639 aa14.67□□□□□ -0.06
TRA2B-204ENST00000414862 GRXCR2A6NFK2 248 aa14.66□□□□□ -0.06
TRA2B-204ENST00000414862 PTGER2P43116 358 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms