RNA–Protein interactions for RNA: ENST00000414487.6

SNRPE-202, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPE, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-202ENST00000414487 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
SNRPE-202ENST00000414487 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
SNRPE-202ENST00000414487 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
SNRPE-202ENST00000414487 PTPN23Q9H3S7 1636 aa13.35□□□□□ -0.27
SNRPE-202ENST00000414487 TCOF1Q13428 1488 aaKnown RBP13.34□□□□□ -0.27
SNRPE-202ENST00000414487 IFT140Q96RY7 1462 aa13.33□□□□□ -0.28
SNRPE-202ENST00000414487 UACAQ9BZF9 1416 aa13.32□□□□□ -0.28
SNRPE-202ENST00000414487 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
SNRPE-202ENST00000414487 WDR62O43379 1518 aa13.31□□□□□ -0.28
SNRPE-202ENST00000414487 SPDYE2BA6NHP3 402 aa13.31□□□□□ -0.28
SNRPE-202ENST00000414487 SPDYE6P0CI01 402 aa13.31□□□□□ -0.28
SNRPE-202ENST00000414487 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
SNRPE-202ENST00000414487 PTPRKQ15262 1439 aa13.3□□□□□ -0.28
SNRPE-202ENST00000414487 MAGI3Q5TCQ9 1506 aa13.3□□□□□ -0.28
SNRPE-202ENST00000414487 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
SNRPE-202ENST00000414487 NAIPQ13075 1403 aa13.3□□□□□ -0.28
SNRPE-202ENST00000414487 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
SNRPE-202ENST00000414487 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
SNRPE-202ENST00000414487 MIA2Q96PC5 1412 aa13.27□□□□□ -0.29
SNRPE-202ENST00000414487 GCC2Q8IWJ2 1684 aa13.27□□□□□ -0.29
SNRPE-202ENST00000414487 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
SNRPE-202ENST00000414487 KIAA0586Q9BVV6 1533 aa13.25□□□□□ -0.29
SNRPE-202ENST00000414487 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
SNRPE-202ENST00000414487 KIAA0556O60303 1618 aa13.22□□□□□ -0.29
SNRPE-202ENST00000414487 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
SNRPE-202ENST00000414487 CDK13Q14004 1512 aaKnown RBP13.21□□□□□ -0.29
SNRPE-202ENST00000414487 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
SNRPE-202ENST00000414487 DISP1Q96F81 1524 aa13.19□□□□□ -0.3
SNRPE-202ENST00000414487 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
SNRPE-202ENST00000414487 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNRPE-202ENST00000414487 EIF4G3O43432 1585 aaKnown RBP13.18□□□□□ -0.3
SNRPE-202ENST00000414487 KDM5BQ9UGL1 1544 aa13.18□□□□□ -0.3
SNRPE-202ENST00000414487 MAGI1Q96QZ7 1491 aaPredicted RBP13.17□□□□□ -0.3
SNRPE-202ENST00000414487 ROCK1Q13464 1354 aa13.17□□□□□ -0.3
SNRPE-202ENST00000414487 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
SNRPE-202ENST00000414487 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
SNRPE-202ENST00000414487 NUP153P49790 1475 aaKnown RBP13.15□□□□□ -0.3
SNRPE-202ENST00000414487 DNMT1P26358 1616 aaKnown RBP13.13□□□□□ -0.31
SNRPE-202ENST00000414487 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
SNRPE-202ENST00000414487 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
SNRPE-202ENST00000414487 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
SNRPE-202ENST00000414487 DAPK1P53355 1430 aa13.13□□□□□ -0.31
SNRPE-202ENST00000414487 DENND4BO75064 1496 aaPredicted RBP13.12□□□□□ -0.31
SNRPE-202ENST00000414487 SYNJ2O15056 1496 aa13.11□□□□□ -0.31
SNRPE-202ENST00000414487 KDM6BO15054 1643 aa13.1□□□□□ -0.31
SNRPE-202ENST00000414487 RRP7BPQ9NSQ0 103 aa13.1□□□□□ -0.31
SNRPE-202ENST00000414487 CDK11AQ9UQ88 783 aaPredicted RBP13.1□□□□□ -0.31
SNRPE-202ENST00000414487 TROQ12816 1431 aaPredicted RBP13.1□□□□□ -0.31
SNRPE-202ENST00000414487 ADCY10Q96PN6 1610 aa13.1□□□□□ -0.31
SNRPE-202ENST00000414487 ABCC5O15440 1437 aa13.09□□□□□ -0.31
SNRPE-202ENST00000414487 CEP170Q5SW79 1584 aa13.09□□□□□ -0.31
SNRPE-202ENST00000414487 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
SNRPE-202ENST00000414487 NUP160Q12769 1436 aa13.08□□□□□ -0.32
SNRPE-202ENST00000414487 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
SNRPE-202ENST00000414487 ANP32CO43423 234 aa13.06□□□□□ -0.32
SNRPE-202ENST00000414487 CHIC2Q9UKJ5 165 aa13.06□□□□□ -0.32
SNRPE-202ENST00000414487 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
SNRPE-202ENST00000414487 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
SNRPE-202ENST00000414487 SPDYE1Q8NFV5 336 aaPredicted RBP13.05□□□□□ -0.32
SNRPE-202ENST00000414487 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
SNRPE-202ENST00000414487 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
SNRPE-202ENST00000414487 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
SNRPE-202ENST00000414487 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
SNRPE-202ENST00000414487 ADGBQ8N7X0 1667 aa13.03□□□□□ -0.32
SNRPE-202ENST00000414487 ANKRD30BQ9BXX2 1392 aa13.03□□□□□ -0.32
SNRPE-202ENST00000414487 CAMSAP2Q08AD1 1489 aa13.03□□□□□ -0.32
SNRPE-202ENST00000414487 RPRD2Q5VT52 1461 aaKnown RBP13.03□□□□□ -0.32
SNRPE-202ENST00000414487 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
SNRPE-202ENST00000414487 CHMP7Q8WUX9 453 aaPredicted RBP13.01□□□□□ -0.33
SNRPE-202ENST00000414487 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
SNRPE-202ENST00000414487 PRG4Q92954 1404 aaPredicted RBP13.01□□□□□ -0.33
SNRPE-202ENST00000414487 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
SNRPE-202ENST00000414487 ABCA8O94911 1581 aa13.01□□□□□ -0.33
SNRPE-202ENST00000414487 CROCC2H7BZ55 1655 aa13.01□□□□□ -0.33
SNRPE-202ENST00000414487 PLB1Q6P1J6 1458 aa13□□□□□ -0.33
SNRPE-202ENST00000414487 TEX14Q8IWB6 1497 aa13□□□□□ -0.33
SNRPE-202ENST00000414487 ARID3CA6NKF2 412 aa12.99□□□□□ -0.33
SNRPE-202ENST00000414487 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
SNRPE-202ENST00000414487 HSPA5P11021 654 aaKnown RBP12.98□□□□□ -0.33
SNRPE-202ENST00000414487 KIF14Q15058 1648 aa12.98□□□□□ -0.33
SNRPE-202ENST00000414487 PZPP20742 1482 aa12.97□□□□□ -0.33
SNRPE-202ENST00000414487 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
SNRPE-202ENST00000414487 NCOA1Q15788 1441 aa12.97□□□□□ -0.33
SNRPE-202ENST00000414487 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
SNRPE-202ENST00000414487 EIF4G2P78344 907 aaKnown RBP eCLIP12.97□□□□□ -0.33
SNRPE-202ENST00000414487 JPH4Q96JJ6 628 aa12.96□□□□□ -0.33
SNRPE-202ENST00000414487 CFDP1Q9UEE9 299 aaPredicted RBP12.96□□□□□ -0.33
SNRPE-202ENST00000414487 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
SNRPE-202ENST00000414487 CNTLNQ9NXG0 1405 aa12.96□□□□□ -0.34
SNRPE-202ENST00000414487 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
SNRPE-202ENST00000414487 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
SNRPE-202ENST00000414487 HAX1O00165 279 aa12.94□□□□□ -0.34
SNRPE-202ENST00000414487 KIAA1107Q9UPP5 1409 aa12.94□□□□□ -0.34
SNRPE-202ENST00000414487 WASHC2AQ641Q2 1341 aa12.93□□□□□ -0.34
SNRPE-202ENST00000414487 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
SNRPE-202ENST00000414487 ATP10BO94823 1461 aa12.92□□□□□ -0.34
SNRPE-202ENST00000414487 MBD5Q9P267 1494 aa12.92□□□□□ -0.34
SNRPE-202ENST00000414487 CCDC7Q96M83 1385 aa12.92□□□□□ -0.34
SNRPE-202ENST00000414487 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
SNRPE-202ENST00000414487 KDM5DQ9BY66 1539 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms