RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 MYT1Q01538 1121 aa7.21□□□□□ -1.26
LINC01048-201ENST00000414480 ZSWIM6Q9HCJ5 1215 aa7.21□□□□□ -1.26
LINC01048-201ENST00000414480 EIF4G1Q04637 1599 aaKnown RBP7.2□□□□□ -1.26
LINC01048-201ENST00000414480 SHROOM4Q9ULL8 1493 aa7.2□□□□□ -1.26
LINC01048-201ENST00000414480 MICALL2Q8IY33 904 aa7.2□□□□□ -1.26
LINC01048-201ENST00000414480 DCAF8L2P0C7V8 631 aa7.19□□□□□ -1.26
LINC01048-201ENST00000414480 CUX2O14529 1486 aa7.18□□□□□ -1.26
LINC01048-201ENST00000414480 MYO15BQ96JP2 1530 aa7.18□□□□□ -1.26
LINC01048-201ENST00000414480 SOX12O15370 315 aa7.18□□□□□ -1.26
LINC01048-201ENST00000414480 VARS2Q5ST30 1063 aaKnown RBP7.18□□□□□ -1.26
LINC01048-201ENST00000414480 RNF166Q96A37 237 aaPredicted RBP7.18□□□□□ -1.26
LINC01048-201ENST00000414480 TMEM92Q6UXU6 159 aa7.16□□□□□ -1.26
LINC01048-201ENST00000414480 RIOK3O14730 519 aaKnown RBP7.15□□□□□ -1.26
LINC01048-201ENST00000414480 ZNF687Q8N1G0 1237 aa7.15□□□□□ -1.26
LINC01048-201ENST00000414480 VGFO15240 615 aaPredicted RBP7.14□□□□□ -1.27
LINC01048-201ENST00000414480 MYT1LQ9UL68 1186 aa7.14□□□□□ -1.27
LINC01048-201ENST00000414480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.13□□□□□ -1.27
LINC01048-201ENST00000414480 PTGER2P43116 358 aa7.13□□□□□ -1.27
LINC01048-201ENST00000414480 GPR153Q6NV75 609 aa7.13□□□□□ -1.27
LINC01048-201ENST00000414480 ZFP91Q96JP5 570 aaPredicted RBP7.13□□□□□ -1.27
LINC01048-201ENST00000414480 MS4A4AQ96JQ5 239 aa7.13□□□□□ -1.27
LINC01048-201ENST00000414480 RNF25Q96BH1 459 aaPredicted RBP7.12□□□□□ -1.27
LINC01048-201ENST00000414480 PHF8Q9UPP1 1060 aa7.11□□□□□ -1.27
LINC01048-201ENST00000414480 TTBK1Q5TCY1 1321 aaPredicted RBP7.08□□□□□ -1.28
LINC01048-201ENST00000414480 NLRP6P59044 892 aa7.07□□□□□ -1.28
LINC01048-201ENST00000414480 ARSIQ5FYB1 569 aa7.07□□□□□ -1.28
LINC01048-201ENST00000414480 TAOK2Q9UL54 1235 aa7.07□□□□□ -1.28
LINC01048-201ENST00000414480 ZNF316A6NFI3 1004 aaPredicted RBP7.06□□□□□ -1.28
LINC01048-201ENST00000414480 FBXO22Q8NEZ5 403 aa7.04□□□□□ -1.28
LINC01048-201ENST00000414480 LSM11P83369 360 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC01048-201ENST00000414480 ANKRD13DQ6ZTN6 518 aa7.03□□□□□ -1.28
LINC01048-201ENST00000414480 BCL11BQ9C0K0 894 aaPredicted RBP7.03□□□□□ -1.28
LINC01048-201ENST00000414480 PBX2P40425 430 aa7.01□□□□□ -1.29
LINC01048-201ENST00000414480 KHSRPQ92945 711 aaKnown RBP eCLIP7.01□□□□□ -1.29
LINC01048-201ENST00000414480 KIF3CO14782 793 aa7□□□□□ -1.29
LINC01048-201ENST00000414480 STK24Q9Y6E0 443 aa7□□□□□ -1.29
LINC01048-201ENST00000414480 ERCC6Q03468 1493 aa6.99□□□□□ -1.29
LINC01048-201ENST00000414480 MFRPQ9BY79 579 aa6.99□□□□□ -1.29
LINC01048-201ENST00000414480 DAXXQ9UER7 740 aaPredicted RBP6.99□□□□□ -1.29
LINC01048-201ENST00000414480 SCRIBQ14160 1630 aa6.98□□□□□ -1.29
LINC01048-201ENST00000414480 C2orf72A6NCS6 295 aa6.98□□□□□ -1.29
LINC01048-201ENST00000414480 NUDT7P0C024 238 aa6.98□□□□□ -1.29
LINC01048-201ENST00000414480 SLC34A2O95436 690 aa6.97□□□□□ -1.29
LINC01048-201ENST00000414480 STK25O00506 426 aa6.96□□□□□ -1.3
LINC01048-201ENST00000414480 PCDHGA4Q9Y5G9 962 aa6.95□□□□□ -1.3
LINC01048-201ENST00000414480 TMC2Q8TDI7 906 aa6.94□□□□□ -1.3
LINC01048-201ENST00000414480 LHX6Q9UPM6 363 aa6.94□□□□□ -1.3
LINC01048-201ENST00000414480 DCAF1Q9Y4B6 1507 aa6.92□□□□□ -1.3
LINC01048-201ENST00000414480 PSDA5PKW4 1024 aaPredicted RBP6.92□□□□□ -1.3
LINC01048-201ENST00000414480 POTEEQ6S8J3 1075 aa6.92□□□□□ -1.3
LINC01048-201ENST00000414480 ERICH6Q7L0X2 663 aa6.92□□□□□ -1.3
LINC01048-201ENST00000414480 HCSTQ9UBK5 93 aa6.92□□□□□ -1.3
LINC01048-201ENST00000414480 AXIN2Q9Y2T1 843 aa6.92□□□□□ -1.3
LINC01048-201ENST00000414480 ECM2O94769 699 aaPredicted RBP6.9□□□□□ -1.3
LINC01048-201ENST00000414480 PLA2G2EQ9NZK7 142 aa6.9□□□□□ -1.3
LINC01048-201ENST00000414480 ARHGAP33O14559 1287 aa6.89□□□□□ -1.31
LINC01048-201ENST00000414480 ADGRD1Q6QNK2 874 aa6.89□□□□□ -1.31
LINC01048-201ENST00000414480 THOC2Q8NI27 1593 aaKnown RBP6.89□□□□□ -1.31
LINC01048-201ENST00000414480 NESP48681 1621 aa6.89□□□□□ -1.31
LINC01048-201ENST00000414480 ZCCHC6Q5VYS8 1495 aaKnown RBP6.88□□□□□ -1.31
LINC01048-201ENST00000414480 NCAPD3P42695 1498 aa6.87□□□□□ -1.31
LINC01048-201ENST00000414480 TK2O00142 265 aa6.86□□□□□ -1.31
LINC01048-201ENST00000414480 PTCD2Q8WV60 388 aaKnown RBP6.85□□□□□ -1.31
LINC01048-201ENST00000414480 KDM4FA0A1W2PPD8 638 aa6.84□□□□□ -1.31
LINC01048-201ENST00000414480 RGL2O15211 777 aa6.84□□□□□ -1.31
LINC01048-201ENST00000414480 PPP1R37O75864 691 aa6.83□□□□□ -1.32
LINC01048-201ENST00000414480 HRO43593 1189 aa6.82□□□□□ -1.32
LINC01048-201ENST00000414480 FOXK1P85037 733 aa6.82□□□□□ -1.32
LINC01048-201ENST00000414480 PPP4R3BQ5MIZ7 849 aa6.82□□□□□ -1.32
LINC01048-201ENST00000414480 PSEN2P49810 448 aa6.81□□□□□ -1.32
LINC01048-201ENST00000414480 DMRTA1Q5VZB9 504 aa6.81□□□□□ -1.32
LINC01048-201ENST00000414480 TBC1D12O60347 775 aa6.8□□□□□ -1.32
LINC01048-201ENST00000414480 PKD2Q13563 968 aa6.8□□□□□ -1.32
LINC01048-201ENST00000414480 PLPP6Q8IY26 295 aa6.8□□□□□ -1.32
LINC01048-201ENST00000414480 KCNH8Q96L42 1107 aa6.8□□□□□ -1.32
LINC01048-201ENST00000414480 KCTD12Q96CX2 325 aaKnown RBP6.79□□□□□ -1.32
LINC01048-201ENST00000414480 STAC3Q96MF2 364 aa6.79□□□□□ -1.32
LINC01048-201ENST00000414480 GPHNQ9NQX3 736 aaPredicted RBP6.79□□□□□ -1.32
LINC01048-201ENST00000414480 ATAD2BQ9ULI0 1458 aa6.78□□□□□ -1.32
LINC01048-201ENST00000414480 DSG2Q14126 1118 aa6.76□□□□□ -1.33
LINC01048-201ENST00000414480 KCNK17Q96T54 332 aa6.76□□□□□ -1.33
LINC01048-201ENST00000414480 SMARCA2P51531 1590 aa6.75□□□□□ -1.33
LINC01048-201ENST00000414480 BAZ1AQ9NRL2 1556 aaPredicted RBP6.74□□□□□ -1.33
LINC01048-201ENST00000414480 HMGXB3Q12766 1538 aa6.74□□□□□ -1.33
LINC01048-201ENST00000414480 RIMBP3CA6NJZ7 1639 aa6.73□□□□□ -1.33
LINC01048-201ENST00000414480 RIMBP3BA6NNM3 1639 aa6.73□□□□□ -1.33
LINC01048-201ENST00000414480 RIMBP3Q9UFD9 1639 aa6.73□□□□□ -1.33
LINC01048-201ENST00000414480 HS6ST3Q8IZP7 471 aa6.73□□□□□ -1.33
LINC01048-201ENST00000414480 VPS9D1Q9Y2B5 631 aa6.73□□□□□ -1.33
LINC01048-201ENST00000414480 OXER1Q8TDS5 423 aa6.72□□□□□ -1.33
LINC01048-201ENST00000414480 LAMC3Q9Y6N6 1575 aa6.72□□□□□ -1.33
LINC01048-201ENST00000414480 KIF21AQ7Z4S6 1674 aa6.71□□□□□ -1.33
LINC01048-201ENST00000414480 RGS20O76081 388 aa6.71□□□□□ -1.34
LINC01048-201ENST00000414480 PRKCSHP14314 528 aaPredicted RBP6.71□□□□□ -1.34
LINC01048-201ENST00000414480 IFFO2Q5TF58 517 aa6.71□□□□□ -1.34
LINC01048-201ENST00000414480 SLC4A5Q9BY07 1137 aa6.71□□□□□ -1.34
LINC01048-201ENST00000414480 BCL2L12Q9HB09 334 aa6.71□□□□□ -1.34
LINC01048-201ENST00000414480 PTPN5P54829 565 aa6.7□□□□□ -1.34
LINC01048-201ENST00000414480 ZNF454Q8N9F8 522 aa6.7□□□□□ -1.34
LINC01048-201ENST00000414480 WDR62O43379 1518 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms