RNA–Protein interactions for RNA: ENST00000414331.5

PTPA-209, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-209ENST00000414331 ARID4BQ4LE39 1312 aaPredicted RBP25.6■■□□□ 1.69
PTPA-209ENST00000414331 POGZQ7Z3K3 1410 aa25.59■■□□□ 1.69
PTPA-209ENST00000414331 FYCO1Q9BQS8 1478 aa25.59■■□□□ 1.69
PTPA-209ENST00000414331 SCAPERQ9BY12 1400 aa25.58■■□□□ 1.69
PTPA-209ENST00000414331 ARHGAP5Q13017 1502 aa25.58■■□□□ 1.68
PTPA-209ENST00000414331 MAGI2Q86UL8 1455 aa25.57■■□□□ 1.68
PTPA-209ENST00000414331 MADDQ8WXG6 1647 aa25.56■■□□□ 1.68
PTPA-209ENST00000414331 EFCAB2Q5VUJ9 269 aa25.55■■□□□ 1.68
PTPA-209ENST00000414331 PTPRMP28827 1452 aa25.53■■□□□ 1.68
PTPA-209ENST00000414331 YEATS2Q9ULM3 1422 aa25.52■■□□□ 1.68
PTPA-209ENST00000414331 PREX2Q70Z35 1606 aa25.52■■□□□ 1.68
PTPA-209ENST00000414331 RIMS1Q86UR5 1692 aaKnown RBP25.5■■□□□ 1.67
PTPA-209ENST00000414331 CDC42BPBQ9Y5S2 1711 aa25.5■■□□□ 1.67
PTPA-209ENST00000414331 ZNF518AQ6AHZ1 1483 aa25.48■■□□□ 1.67
PTPA-209ENST00000414331 SIGLEC1Q9BZZ2 1709 aa25.46■■□□□ 1.67
PTPA-209ENST00000414331 KDM5CP41229 1560 aa25.44■■□□□ 1.66
PTPA-209ENST00000414331 CDC42BPAQ5VT25 1732 aa25.43■■□□□ 1.66
PTPA-209ENST00000414331 C9orf84Q5VXU9 1444 aa25.42■■□□□ 1.66
PTPA-209ENST00000414331 ABCC1P33527 1531 aa25.42■■□□□ 1.66
PTPA-209ENST00000414331 FER1L4A9Z1Z3 1794 aa25.41■■□□□ 1.66
PTPA-209ENST00000414331 ITSN2Q9NZM3 1697 aa25.41■■□□□ 1.66
PTPA-209ENST00000414331 ATP10AO60312 1499 aa25.4■■□□□ 1.66
PTPA-209ENST00000414331 MYT1LQ9UL68 1186 aa25.35■■□□□ 1.65
PTPA-209ENST00000414331 CEP162Q5TB80 1403 aa25.34■■□□□ 1.65
PTPA-209ENST00000414331 DIP2CQ9Y2E4 1556 aa25.34■■□□□ 1.65
PTPA-209ENST00000414331 MLECQ14165 292 aa25.33■■□□□ 1.65
PTPA-209ENST00000414331 AFAP1Q8N556 730 aa25.33■■□□□ 1.65
PTPA-209ENST00000414331 ABCA6Q8N139 1617 aa25.32■■□□□ 1.64
PTPA-209ENST00000414331 MLH3Q9UHC1 1453 aa25.31■■□□□ 1.64
PTPA-209ENST00000414331 ARHGEF12Q9NZN5 1544 aa25.31■■□□□ 1.64
PTPA-209ENST00000414331 REREQ9P2R6 1566 aa25.31■■□□□ 1.64
PTPA-209ENST00000414331 MTUS2Q5JR59 1369 aa25.3■■□□□ 1.64
PTPA-209ENST00000414331 TRAPPC8Q9Y2L5 1435 aa25.29■■□□□ 1.64
PTPA-209ENST00000414331 SAMD9LQ8IVG5 1584 aa25.29■■□□□ 1.64
PTPA-209ENST00000414331 LMTK3Q96Q04 1460 aa25.28■■□□□ 1.64
PTPA-209ENST00000414331 EHBP1L1Q8N3D4 1523 aa25.27■■□□□ 1.64
PTPA-209ENST00000414331 GPATCH8Q9UKJ3 1502 aaKnown RBP25.27■■□□□ 1.64
PTPA-209ENST00000414331 SYCP2Q9BX26 1530 aa25.27■■□□□ 1.64
PTPA-209ENST00000414331 PLPPR3Q6T4P5 718 aa25.26■■□□□ 1.63
PTPA-209ENST00000414331 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
PTPA-209ENST00000414331 KIDINS220Q9ULH0 1771 aa25.24■■□□□ 1.63
PTPA-209ENST00000414331 CCNB3Q8WWL7 1395 aa25.24■■□□□ 1.63
PTPA-209ENST00000414331 PLEKHH2Q8IVE3 1493 aa25.22■■□□□ 1.63
PTPA-209ENST00000414331 AGLP35573 1532 aa25.2■■□□□ 1.62
PTPA-209ENST00000414331 TIAM1Q13009 1591 aa25.19■■□□□ 1.62
PTPA-209ENST00000414331 CFDP1Q9UEE9 299 aaPredicted RBP25.18■■□□□ 1.62
PTPA-209ENST00000414331 PREX1Q8TCU6 1659 aa25.17■■□□□ 1.62
PTPA-209ENST00000414331 KIAA1107Q9UPP5 1409 aa25.16■■□□□ 1.62
PTPA-209ENST00000414331 ATP7AQ04656 1500 aa25.14■■□□□ 1.62
PTPA-209ENST00000414331 SUPT6HQ7KZ85 1726 aaKnown RBP25.14■■□□□ 1.61
PTPA-209ENST00000414331 INO80Q9ULG1 1556 aaPredicted RBP25.14■■□□□ 1.61
PTPA-209ENST00000414331 SPAG9O60271 1321 aaKnown RBP25.13■■□□□ 1.61
PTPA-209ENST00000414331 HNRNPMP52272 730 aaKnown RBP eCLIP25.12■■□□□ 1.612e-7■■□□□ 14.1
PTPA-209ENST00000414331 ILDR1Q86SU0 546 aaPredicted RBP25.11■■□□□ 1.61
PTPA-209ENST00000414331 ESF1Q9H501 851 aaKnown RBP25.09■■□□□ 1.61
PTPA-209ENST00000414331 C3P01024 1663 aa25.09■■□□□ 1.61
PTPA-209ENST00000414331 VPS8Q8N3P4 1428 aa25.08■■□□□ 1.61
PTPA-209ENST00000414331 HSPA2P54652 639 aa25.07■■□□□ 1.6
PTPA-209ENST00000414331 CEBPAP49715 358 aaPredicted RBP25.06■■□□□ 1.6
PTPA-209ENST00000414331 CNTLNQ9NXG0 1405 aa25.05■■□□□ 1.6
PTPA-209ENST00000414331 ADGBQ8N7X0 1667 aa25.05■■□□□ 1.6
PTPA-209ENST00000414331 NCOA2Q15596 1464 aa25.05■■□□□ 1.6
PTPA-209ENST00000414331 PLXNC1O60486 1568 aa25.05■■□□□ 1.6
PTPA-209ENST00000414331 LOC105371045A0A1W2PR82 267 aa25.04■■□□□ 1.6
PTPA-209ENST00000414331 SETD1BQ9UPS6 1966 aaKnown RBP25.04■■□□□ 1.6
PTPA-209ENST00000414331 UHRF1BP1Q6BDS2 1440 aa25.03■■□□□ 1.6
PTPA-209ENST00000414331 A2MP01023 1474 aa25.02■■□□□ 1.6
PTPA-209ENST00000414331 MROH2AA6NES4 1674 aa25.02■■□□□ 1.6
PTPA-209ENST00000414331 ZNF644Q9H582 1327 aaPredicted RBP25■■□□□ 1.59
PTPA-209ENST00000414331 CAMSAP2Q08AD1 1489 aa24.99■■□□□ 1.59
PTPA-209ENST00000414331 MBD5Q9P267 1494 aa24.99■■□□□ 1.59
PTPA-209ENST00000414331 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
PTPA-209ENST00000414331 LRRC9Q6ZRR7 1453 aa24.96■■□□□ 1.59
PTPA-209ENST00000414331 CLTCQ00610 1675 aaKnown RBP24.95■■□□□ 1.58
PTPA-209ENST00000414331 RTEL1-TNFRSF6BF6WH68 1400 aa24.95■■□□□ 1.58
PTPA-209ENST00000414331 MAP3K1Q13233 1512 aa24.93■■□□□ 1.58
PTPA-209ENST00000414331 ARHGEF5Q12774 1597 aa24.9■■□□□ 1.58
PTPA-209ENST00000414331 NPATQ14207 1427 aa24.88■■□□□ 1.57
PTPA-209ENST00000414331 STRCQ7RTU9 1775 aa24.88■■□□□ 1.57
PTPA-209ENST00000414331 FBXO41Q8TF61 875 aa24.88■■□□□ 1.57
PTPA-209ENST00000414331 ZMYM3Q14202 1370 aa24.86■■□□□ 1.57
PTPA-209ENST00000414331 RSPH4AQ5TD94 716 aa24.86■■□□□ 1.57
PTPA-209ENST00000414331 GGT6Q6P531 493 aa24.86■■□□□ 1.57
PTPA-209ENST00000414331 DHX29Q7Z478 1369 aaKnown RBP24.83■■□□□ 1.57
PTPA-209ENST00000414331 DMRT2Q9Y5R5 561 aa24.82■■□□□ 1.56
PTPA-209ENST00000414331 MYO3AQ8NEV4 1616 aa24.82■■□□□ 1.56
PTPA-209ENST00000414331 PPP6R1Q9UPN7 881 aa24.81■■□□□ 1.56
PTPA-209ENST00000414331 ZNF142P52746 1687 aaPredicted RBP24.8■■□□□ 1.56
PTPA-209ENST00000414331 MYOM3Q5VTT5 1437 aa24.79■■□□□ 1.56
PTPA-209ENST00000414331 FAM135AQ9P2D6 1515 aa24.79■■□□□ 1.56
PTPA-209ENST00000414331 TSPY4P0CV99 314 aa24.78■■□□□ 1.56
PTPA-209ENST00000414331 TSPY10P0CW01 314 aa24.78■■□□□ 1.56
PTPA-209ENST00000414331 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
PTPA-209ENST00000414331 MAST1Q9Y2H9 1570 aa24.78■■□□□ 1.56
PTPA-209ENST00000414331 MIA2Q96PC5 1412 aa24.78■■□□□ 1.56
PTPA-209ENST00000414331 APLP2Q06481 763 aa24.77■■□□□ 1.56
PTPA-209ENST00000414331 PTPRKQ15262 1439 aa24.77■■□□□ 1.56
PTPA-209ENST00000414331 KDM5DQ9BY66 1539 aa24.76■■□□□ 1.55
PTPA-209ENST00000414331 NCOA1Q15788 1441 aa24.76■■□□□ 1.55
PTPA-209ENST00000414331 KIF3BO15066 747 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms