RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 HECW1Q76N89 1606 aa23.69■■□□□ 1.38
SNHG17-201ENST00000413755 EFCAB2Q5VUJ9 269 aa23.68■■□□□ 1.38
SNHG17-201ENST00000413755 PCF11O94913 1555 aaKnown RBP23.68■■□□□ 1.38
SNHG17-201ENST00000413755 SIGLEC1Q9BZZ2 1709 aa23.67■■□□□ 1.38
SNHG17-201ENST00000413755 RIMS1Q86UR5 1692 aaKnown RBP23.65■■□□□ 1.38
SNHG17-201ENST00000413755 MLECQ14165 292 aa23.65■■□□□ 1.38
SNHG17-201ENST00000413755 TROQ12816 1431 aaPredicted RBP23.64■■□□□ 1.37
SNHG17-201ENST00000413755 PLPPR3Q6T4P5 718 aa23.63■■□□□ 1.37
SNHG17-201ENST00000413755 FBXO41Q8TF61 875 aa23.62■■□□□ 1.37
SNHG17-201ENST00000413755 KIF14Q15058 1648 aa23.61■■□□□ 1.37
SNHG17-201ENST00000413755 HSPA2P54652 639 aa23.6■■□□□ 1.37
SNHG17-201ENST00000413755 ATP10AO60312 1499 aa23.6■■□□□ 1.37
SNHG17-201ENST00000413755 AFAP1Q8N556 730 aa23.58■■□□□ 1.37
SNHG17-201ENST00000413755 C9orf84Q5VXU9 1444 aa23.57■■□□□ 1.36
SNHG17-201ENST00000413755 CLIP1P30622 1438 aa23.56■■□□□ 1.36
SNHG17-201ENST00000413755 MYO5CQ9NQX4 1742 aa23.56■■□□□ 1.36
SNHG17-201ENST00000413755 ZNF518AQ6AHZ1 1483 aa23.54■■□□□ 1.36
SNHG17-201ENST00000413755 ARHGAP5Q13017 1502 aa23.54■■□□□ 1.36
SNHG17-201ENST00000413755 ARHGEF12Q9NZN5 1544 aa23.54■■□□□ 1.36
SNHG17-201ENST00000413755 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
SNHG17-201ENST00000413755 CASKIN1Q8WXD9 1431 aa23.5■■□□□ 1.35
SNHG17-201ENST00000413755 KDM5CP41229 1560 aa23.5■■□□□ 1.35
SNHG17-201ENST00000413755 CEBPAP49715 358 aaPredicted RBP23.49■■□□□ 1.35
SNHG17-201ENST00000413755 FER1L4A9Z1Z3 1794 aa23.47■■□□□ 1.35
SNHG17-201ENST00000413755 CCDC18Q5T9S5 1454 aa23.45■■□□□ 1.34
SNHG17-201ENST00000413755 MYT1LQ9UL68 1186 aa23.45■■□□□ 1.34
SNHG17-201ENST00000413755 TRAPPC8Q9Y2L5 1435 aa23.44■■□□□ 1.34
SNHG17-201ENST00000413755 MLH3Q9UHC1 1453 aa23.43■■□□□ 1.34
SNHG17-201ENST00000413755 CDC42BPBQ9Y5S2 1711 aa23.43■■□□□ 1.34
SNHG17-201ENST00000413755 DIP2CQ9Y2E4 1556 aa23.42■■□□□ 1.34
SNHG17-201ENST00000413755 ABCC1P33527 1531 aa23.39■■□□□ 1.34
SNHG17-201ENST00000413755 PREX2Q70Z35 1606 aa23.39■■□□□ 1.33
SNHG17-201ENST00000413755 REREQ9P2R6 1566 aa23.39■■□□□ 1.33
SNHG17-201ENST00000413755 ABCA6Q8N139 1617 aa23.37■■□□□ 1.33
SNHG17-201ENST00000413755 FYCO1Q9BQS8 1478 aa23.36■■□□□ 1.33
SNHG17-201ENST00000413755 AGLP35573 1532 aa23.34■■□□□ 1.33
SNHG17-201ENST00000413755 CERKQ8TCT0 537 aa23.34■■□□□ 1.33
SNHG17-201ENST00000413755 ZNF777Q9ULD5 760 aaPredicted RBP23.32■■□□□ 1.32
SNHG17-201ENST00000413755 GPATCH8Q9UKJ3 1502 aaKnown RBP23.32■■□□□ 1.32
SNHG17-201ENST00000413755 PREX1Q8TCU6 1659 aa23.32■■□□□ 1.32
SNHG17-201ENST00000413755 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
SNHG17-201ENST00000413755 UHRF1BP1Q6BDS2 1440 aa23.3■■□□□ 1.32
SNHG17-201ENST00000413755 CDC42BPAQ5VT25 1732 aa23.29■■□□□ 1.32
SNHG17-201ENST00000413755 KIDINS220Q9ULH0 1771 aa23.28■■□□□ 1.32
SNHG17-201ENST00000413755 HNRNPMP52272 730 aaKnown RBP eCLIP23.28■■□□□ 1.326e-8■■■■□ 21.5
SNHG17-201ENST00000413755 SAMD9LQ8IVG5 1584 aa23.27■■□□□ 1.32
SNHG17-201ENST00000413755 ESF1Q9H501 851 aaKnown RBP23.26■■□□□ 1.31
SNHG17-201ENST00000413755 DMRT2Q9Y5R5 561 aa23.25■■□□□ 1.31
SNHG17-201ENST00000413755 SPAG9O60271 1321 aaKnown RBP23.24■■□□□ 1.31
SNHG17-201ENST00000413755 SYCP2Q9BX26 1530 aa23.23■■□□□ 1.31
SNHG17-201ENST00000413755 CFDP1Q9UEE9 299 aaPredicted RBP23.23■■□□□ 1.31
SNHG17-201ENST00000413755 C3P01024 1663 aa23.22■■□□□ 1.31
SNHG17-201ENST00000413755 KIAA1107Q9UPP5 1409 aa23.22■■□□□ 1.31
SNHG17-201ENST00000413755 STRCQ7RTU9 1775 aa23.22■■□□□ 1.31
SNHG17-201ENST00000413755 CNTLNQ9NXG0 1405 aa23.21■■□□□ 1.31
SNHG17-201ENST00000413755 CCNB3Q8WWL7 1395 aa23.2■■□□□ 1.3
SNHG17-201ENST00000413755 SETD1BQ9UPS6 1966 aaKnown RBP23.2■■□□□ 1.3
SNHG17-201ENST00000413755 MTUS2Q5JR59 1369 aa23.17■■□□□ 1.3
SNHG17-201ENST00000413755 PLEKHH2Q8IVE3 1493 aa23.17■■□□□ 1.3
SNHG17-201ENST00000413755 ZMYM3Q14202 1370 aa23.16■■□□□ 1.3
SNHG17-201ENST00000413755 PTPRTO14522 1441 aa23.16■■□□□ 1.3
SNHG17-201ENST00000413755 ZNF644Q9H582 1327 aaPredicted RBP23.14■■□□□ 1.3
SNHG17-201ENST00000413755 ATP7AQ04656 1500 aa23.14■■□□□ 1.3
SNHG17-201ENST00000413755 A2MP01023 1474 aa23.12■■□□□ 1.29
SNHG17-201ENST00000413755 NPATQ14207 1427 aa23.12■■□□□ 1.29
SNHG17-201ENST00000413755 PLXNC1O60486 1568 aa23.1■■□□□ 1.29
SNHG17-201ENST00000413755 INO80Q9ULG1 1556 aaPredicted RBP23.1■■□□□ 1.29
SNHG17-201ENST00000413755 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
SNHG17-201ENST00000413755 MBD5Q9P267 1494 aa23.09■■□□□ 1.29
SNHG17-201ENST00000413755 GGT6Q6P531 493 aa23.08■■□□□ 1.29
SNHG17-201ENST00000413755 SUPT6HQ7KZ85 1726 aaKnown RBP23.08■■□□□ 1.28
SNHG17-201ENST00000413755 TIAM1Q13009 1591 aa23.07■■□□□ 1.28
SNHG17-201ENST00000413755 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
SNHG17-201ENST00000413755 CEP162Q5TB80 1403 aa23.06■■□□□ 1.28
SNHG17-201ENST00000413755 EHBP1L1Q8N3D4 1523 aa23.05■■□□□ 1.28
SNHG17-201ENST00000413755 PTPRKQ15262 1439 aa23.04■■□□□ 1.28
SNHG17-201ENST00000413755 PPP6R1Q9UPN7 881 aa23.03■■□□□ 1.28
SNHG17-201ENST00000413755 LTBP4Q8N2S1 1624 aa23.03■■□□□ 1.28
SNHG17-201ENST00000413755 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
SNHG17-201ENST00000413755 NCKAP5LQ9HCH0 1330 aa23.02■■□□□ 1.28
SNHG17-201ENST00000413755 RTEL1-TNFRSF6BF6WH68 1400 aa23.01■■□□□ 1.27
SNHG17-201ENST00000413755 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
SNHG17-201ENST00000413755 DHX29Q7Z478 1369 aaKnown RBP23■■□□□ 1.27
SNHG17-201ENST00000413755 ADGBQ8N7X0 1667 aa22.96■■□□□ 1.27
SNHG17-201ENST00000413755 NCOA2Q15596 1464 aa22.95■■□□□ 1.26
SNHG17-201ENST00000413755 PLA2R1Q13018 1463 aa22.94■■□□□ 1.26
SNHG17-201ENST00000413755 PKD2Q13563 968 aa22.94■■□□□ 1.26
SNHG17-201ENST00000413755 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
SNHG17-201ENST00000413755 MYO3AQ8NEV4 1616 aa22.93■■□□□ 1.26
SNHG17-201ENST00000413755 ZNF335Q9H4Z2 1342 aaPredicted RBP22.92■■□□□ 1.26
SNHG17-201ENST00000413755 KIF3BO15066 747 aa22.92■■□□□ 1.26
SNHG17-201ENST00000413755 CEP170BQ9Y4F5 1589 aaPredicted RBP22.92■■□□□ 1.26
SNHG17-201ENST00000413755 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
SNHG17-201ENST00000413755 IQSEC2Q5JU85 1478 aa22.92■■□□□ 1.26
SNHG17-201ENST00000413755 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
SNHG17-201ENST00000413755 CAMSAP2Q08AD1 1489 aa22.91■■□□□ 1.26
SNHG17-201ENST00000413755 ZNF142P52746 1687 aaPredicted RBP22.9■■□□□ 1.26
SNHG17-201ENST00000413755 FBXO31Q5XUX0 539 aaPredicted RBP22.89■■□□□ 1.25
SNHG17-201ENST00000413755 A2ML1A8K2U0 1454 aa22.86■■□□□ 1.25
SNHG17-201ENST00000413755 DISP3Q9P2K9 1392 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms