RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 TSHZ2Q9NRE2 1034 aa9.71□□□□□ -0.86
PRKCA-202ENST00000413366 STK26Q9P289 416 aa9.7□□□□□ -0.86
PRKCA-202ENST00000413366 SAFB2Q14151 953 aaKnown RBP eCLIP9.7□□□□□ -0.865e-7■■■□□ 15.7
PRKCA-202ENST00000413366 CHMP4BQ9H444 224 aaKnown RBP9.7□□□□□ -0.86
PRKCA-202ENST00000413366 NEUROD2Q15784 382 aa9.7□□□□□ -0.86
PRKCA-202ENST00000413366 HDGFL2Q7Z4V5 671 aaPredicted RBP9.7□□□□□ -0.86
PRKCA-202ENST00000413366 FANCIQ9NVI1 1328 aa9.69□□□□□ -0.86
PRKCA-202ENST00000413366 EEA1Q15075 1411 aa9.69□□□□□ -0.86
PRKCA-202ENST00000413366 CECR2Q9BXF3 1484 aa9.69□□□□□ -0.86
PRKCA-202ENST00000413366 KCNJ4P48050 445 aa9.68□□□□□ -0.86
PRKCA-202ENST00000413366 NRDCO43847 1150 aa9.68□□□□□ -0.86
PRKCA-202ENST00000413366 MSH5O43196 834 aa9.67□□□□□ -0.86
PRKCA-202ENST00000413366 TNNT3P45378 269 aaPredicted RBP9.67□□□□□ -0.86
PRKCA-202ENST00000413366 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
PRKCA-202ENST00000413366 MSNP26038 577 aaKnown RBP9.66□□□□□ -0.86
PRKCA-202ENST00000413366 TPRNQ4KMQ1 711 aa9.66□□□□□ -0.86
PRKCA-202ENST00000413366 CEP164Q9UPV0 1460 aa9.66□□□□□ -0.86
PRKCA-202ENST00000413366 CUX2O14529 1486 aa9.66□□□□□ -0.86
PRKCA-202ENST00000413366 MYO15BQ96JP2 1530 aa9.65□□□□□ -0.86
PRKCA-202ENST00000413366 TMF1P82094 1093 aa9.65□□□□□ -0.86
PRKCA-202ENST00000413366 SMARCA2P51531 1590 aa9.65□□□□□ -0.87
PRKCA-202ENST00000413366 FHAD1B1AJZ9 1412 aa9.64□□□□□ -0.87
PRKCA-202ENST00000413366 EVA1CP58658 441 aa9.64□□□□□ -0.87
PRKCA-202ENST00000413366 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.64□□□□□ -0.87
PRKCA-202ENST00000413366 CC2D1BQ5T0F9 858 aaKnown RBP9.64□□□□□ -0.87
PRKCA-202ENST00000413366 HIRIP3Q9BW71 556 aaPredicted RBP9.64□□□□□ -0.87
PRKCA-202ENST00000413366 MS4A1P11836 297 aa9.63□□□□□ -0.87
PRKCA-202ENST00000413366 PPP4R2Q9NY27 417 aa9.63□□□□□ -0.87
PRKCA-202ENST00000413366 FOXD1Q16676 465 aa9.62□□□□□ -0.87
PRKCA-202ENST00000413366 MORC1Q86VD1 984 aa9.62□□□□□ -0.87
PRKCA-202ENST00000413366 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
PRKCA-202ENST00000413366 EFCAB2Q5VUJ9 269 aa9.62□□□□□ -0.87
PRKCA-202ENST00000413366 TAF7LQ5H9L4 462 aa9.61□□□□□ -0.87
PRKCA-202ENST00000413366 DCAF11Q8TEB1 546 aa9.61□□□□□ -0.87
PRKCA-202ENST00000413366 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
PRKCA-202ENST00000413366 CARMIL1Q5VZK9 1371 aa9.61□□□□□ -0.87
PRKCA-202ENST00000413366 MAP7D2Q96T17 732 aa9.61□□□□□ -0.87
PRKCA-202ENST00000413366 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
PRKCA-202ENST00000413366 MTERF4Q7Z6M4 381 aaKnown RBP9.6□□□□□ -0.87
PRKCA-202ENST00000413366 NGDNQ8NEJ9 315 aaKnown RBP9.6□□□□□ -0.87
PRKCA-202ENST00000413366 GNL2Q13823 731 aaKnown RBP9.6□□□□□ -0.87
PRKCA-202ENST00000413366 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
PRKCA-202ENST00000413366 CYB5RLQ6IPT4 315 aa9.6□□□□□ -0.87
PRKCA-202ENST00000413366 FRAT1Q92837 279 aaPredicted RBP9.6□□□□□ -0.87
PRKCA-202ENST00000413366 SOGA1O94964 1423 aa9.59□□□□□ -0.87
PRKCA-202ENST00000413366 CHMP3Q9Y3E7 222 aa9.59□□□□□ -0.87
PRKCA-202ENST00000413366 OSCARQ8IYS5 282 aa9.59□□□□□ -0.87
PRKCA-202ENST00000413366 WASHC2CQ9Y4E1 1318 aa9.58□□□□□ -0.88
PRKCA-202ENST00000413366 PRM3Q9NNZ6 103 aa9.58□□□□□ -0.88
PRKCA-202ENST00000413366 EIF3AQ14152 1382 aaKnown RBP9.58□□□□□ -0.88
PRKCA-202ENST00000413366 CEP162Q5TB80 1403 aa9.58□□□□□ -0.88
PRKCA-202ENST00000413366 GORABQ5T7V8 394 aa9.58□□□□□ -0.88
PRKCA-202ENST00000413366 SPAG9O60271 1321 aaKnown RBP9.57□□□□□ -0.88
PRKCA-202ENST00000413366 IRX6P78412 446 aaPredicted RBP9.57□□□□□ -0.88
PRKCA-202ENST00000413366 CHMP4AQ9BY43 222 aa9.57□□□□□ -0.88
PRKCA-202ENST00000413366 PLCB2Q00722 1185 aa9.57□□□□□ -0.88
PRKCA-202ENST00000413366 MCCP23508 829 aa9.56□□□□□ -0.88
PRKCA-202ENST00000413366 CALD1Q05682 793 aaKnown RBP9.56□□□□□ -0.88
PRKCA-202ENST00000413366 RRP9O43818 475 aaKnown RBP9.56□□□□□ -0.88
PRKCA-202ENST00000413366 ARHGAP35Q9NRY4 1499 aa9.55□□□□□ -0.88
PRKCA-202ENST00000413366 FRAT2O75474 233 aaPredicted RBP9.55□□□□□ -0.88
PRKCA-202ENST00000413366 ANO8Q9HCE9 1232 aaPredicted RBP9.55□□□□□ -0.88
PRKCA-202ENST00000413366 KIF3BO15066 747 aa9.55□□□□□ -0.88
PRKCA-202ENST00000413366 CWC22Q9HCG8 908 aaKnown RBP9.55□□□□□ -0.88
PRKCA-202ENST00000413366 AMPHP49418 695 aa9.54□□□□□ -0.88
PRKCA-202ENST00000413366 PDE4CQ08493 712 aa9.53□□□□□ -0.88
PRKCA-202ENST00000413366 IPO9Q96P70 1041 aaKnown RBP9.53□□□□□ -0.88
PRKCA-202ENST00000413366 TRIM34Q9BYJ4 488 aa9.53□□□□□ -0.88
PRKCA-202ENST00000413366 SF3B2Q13435 895 aaKnown RBP9.53□□□□□ -0.88
PRKCA-202ENST00000413366 SETQ01105 290 aaPredicted RBP9.53□□□□□ -0.88
PRKCA-202ENST00000413366 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
PRKCA-202ENST00000413366 CTDP1Q9Y5B0 961 aaPredicted RBP9.52□□□□□ -0.89
PRKCA-202ENST00000413366 GPATCH3Q96I76 525 aa9.52□□□□□ -0.89
PRKCA-202ENST00000413366 SENP3-EIF4A1A0A087X0R7 540 aa9.52□□□□□ -0.89
PRKCA-202ENST00000413366 GOLGA6L4A6NEF3 574 aa9.52□□□□□ -0.89
PRKCA-202ENST00000413366 HSP90AB1P08238 724 aaKnown RBP9.51□□□□□ -0.89
PRKCA-202ENST00000413366 CCER2I3L3R5 266 aa9.51□□□□□ -0.89
PRKCA-202ENST00000413366 KIAA2012Q0VF49 1180 aa9.51□□□□□ -0.89
PRKCA-202ENST00000413366 VPS53Q5VIR6 699 aa9.51□□□□□ -0.89
PRKCA-202ENST00000413366 TERF2IPQ9NYB0 399 aa9.51□□□□□ -0.89
PRKCA-202ENST00000413366 LTV1Q96GA3 475 aaPredicted RBP9.51□□□□□ -0.89
PRKCA-202ENST00000413366 TIMELESSQ9UNS1 1208 aa9.51□□□□□ -0.89
PRKCA-202ENST00000413366 DRC7Q8IY82 874 aa9.51□□□□□ -0.89
PRKCA-202ENST00000413366 GOLGA6L1Q8N7Z2 621 aa9.51□□□□□ -0.89
PRKCA-202ENST00000413366 TNIKQ9UKE5 1360 aa9.51□□□□□ -0.89
PRKCA-202ENST00000413366 ROCK2O75116 1388 aaKnown RBP9.51□□□□□ -0.89
PRKCA-202ENST00000413366 ANKRD30AQ9BXX3 1397 aa9.5□□□□□ -0.89
PRKCA-202ENST00000413366 A0A0U1RQG5 324 aaPredicted RBP9.5□□□□□ -0.89
PRKCA-202ENST00000413366 KIAA1211Q6ZU35 1233 aa9.5□□□□□ -0.89
PRKCA-202ENST00000413366 TAF3Q5VWG9 929 aa9.5□□□□□ -0.89
PRKCA-202ENST00000413366 STK31Q9BXU1 1019 aa9.5□□□□□ -0.89
PRKCA-202ENST00000413366 C1orf141Q5JVX7 400 aa9.5□□□□□ -0.89
PRKCA-202ENST00000413366 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
PRKCA-202ENST00000413366 TDRD9Q8NDG6 1382 aaKnown RBP9.49□□□□□ -0.89
PRKCA-202ENST00000413366 NUTM2FA1L443 756 aa9.49□□□□□ -0.89
PRKCA-202ENST00000413366 GOLGA6L3A6NEY3 463 aa9.49□□□□□ -0.89
PRKCA-202ENST00000413366 ATF3P18847 181 aa9.49□□□□□ -0.89
PRKCA-202ENST00000413366 HDAC5Q9UQL6 1122 aa9.49□□□□□ -0.89
PRKCA-202ENST00000413366 GSE1Q14687 1217 aa9.49□□□□□ -0.89
PRKCA-202ENST00000413366 FAM69CQ0P6D2 419 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms