RNA–Protein interactions for RNA: ENST00000412908.6

PSMA3-202, Transcript of proteasome subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene PSMA3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-202ENST00000412908 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
PSMA3-202ENST00000412908 TMEM92Q6UXU6 159 aa13.71□□□□□ -0.21
PSMA3-202ENST00000412908 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.21
PSMA3-202ENST00000412908 HAP1P54257 671 aaPredicted RBP13.69□□□□□ -0.22
PSMA3-202ENST00000412908 TMC2Q8TDI7 906 aa13.68□□□□□ -0.22
PSMA3-202ENST00000412908 C2orf72A6NCS6 295 aa13.66□□□□□ -0.22
PSMA3-202ENST00000412908 PDE4AP27815 886 aa13.62□□□□□ -0.23
PSMA3-202ENST00000412908 NCKAP5LQ9HCH0 1330 aa13.62□□□□□ -0.23
PSMA3-202ENST00000412908 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
PSMA3-202ENST00000412908 GPHNQ9NQX3 736 aaPredicted RBP13.61□□□□□ -0.23
PSMA3-202ENST00000412908 KIF3CO14782 793 aa13.6□□□□□ -0.23
PSMA3-202ENST00000412908 CRISPLD2Q9H0B8 497 aa13.6□□□□□ -0.23
PSMA3-202ENST00000412908 ABCC9O60706 1549 aa13.55□□□□□ -0.24
PSMA3-202ENST00000412908 DSG2Q14126 1118 aa13.55□□□□□ -0.24
PSMA3-202ENST00000412908 PLPP6Q8IY26 295 aa13.53□□□□□ -0.24
PSMA3-202ENST00000412908 FOXK1P85037 733 aa13.52□□□□□ -0.25
PSMA3-202ENST00000412908 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
PSMA3-202ENST00000412908 PPP1R15BQ5SWA1 713 aa13.51□□□□□ -0.25
PSMA3-202ENST00000412908 WDR70Q9NW82 654 aa13.5□□□□□ -0.25
PSMA3-202ENST00000412908 SNPHO15079 494 aa13.49□□□□□ -0.25
PSMA3-202ENST00000412908 MFSD10Q14728 455 aa13.47□□□□□ -0.25
PSMA3-202ENST00000412908 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
PSMA3-202ENST00000412908 HOXB3P14651 431 aaPredicted RBP13.45□□□□□ -0.26
PSMA3-202ENST00000412908 DOK7Q18PE1 504 aa13.44□□□□□ -0.26
PSMA3-202ENST00000412908 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
PSMA3-202ENST00000412908 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
PSMA3-202ENST00000412908 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
PSMA3-202ENST00000412908 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
PSMA3-202ENST00000412908 UPF1Q92900 1129 aaKnown RBP eCLIP13.38□□□□□ -0.27
PSMA3-202ENST00000412908 ST18O60284 1047 aa13.36□□□□□ -0.27
PSMA3-202ENST00000412908 E2F4Q16254 413 aa13.36□□□□□ -0.27
PSMA3-202ENST00000412908 SLC34A2O95436 690 aa13.35□□□□□ -0.27
PSMA3-202ENST00000412908 ARSIQ5FYB1 569 aa13.34□□□□□ -0.27
PSMA3-202ENST00000412908 EMILIN3Q9NT22 766 aa13.33□□□□□ -0.28
PSMA3-202ENST00000412908 PCDHGA4Q9Y5G9 962 aa13.33□□□□□ -0.28
PSMA3-202ENST00000412908 SLC24A1O60721 1099 aa13.32□□□□□ -0.28
PSMA3-202ENST00000412908 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.288e-8■■■□□ 15.9
PSMA3-202ENST00000412908 CAMK2BQ13554 666 aa13.31□□□□□ -0.28
PSMA3-202ENST00000412908 PTCD2Q8WV60 388 aaKnown RBP13.31□□□□□ -0.28
PSMA3-202ENST00000412908 TBC1D12O60347 775 aa13.3□□□□□ -0.28
PSMA3-202ENST00000412908 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
PSMA3-202ENST00000412908 OXER1Q8TDS5 423 aa13.3□□□□□ -0.28
PSMA3-202ENST00000412908 ZSWIM6Q9HCJ5 1215 aa13.3□□□□□ -0.28
PSMA3-202ENST00000412908 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
PSMA3-202ENST00000412908 HOXB1P14653 301 aaPredicted RBP13.27□□□□□ -0.29
PSMA3-202ENST00000412908 LCE2DQ5TA82 110 aaPredicted RBP13.27□□□□□ -0.29
PSMA3-202ENST00000412908 MARVELD3Q96A59 401 aa13.27□□□□□ -0.29
PSMA3-202ENST00000412908 DPYSL4O14531 572 aa13.26□□□□□ -0.29
PSMA3-202ENST00000412908 NUDT7P0C024 238 aa13.26□□□□□ -0.29
PSMA3-202ENST00000412908 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
PSMA3-202ENST00000412908 EMP3P54852 163 aa13.21□□□□□ -0.29
PSMA3-202ENST00000412908 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
PSMA3-202ENST00000412908 EVI5O60447 810 aa13.19□□□□□ -0.3
PSMA3-202ENST00000412908 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
PSMA3-202ENST00000412908 CCDC180Q9P1Z9 1646 aa13.16□□□□□ -0.3
PSMA3-202ENST00000412908 ERBB3P21860 1342 aa13.15□□□□□ -0.3
PSMA3-202ENST00000412908 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
PSMA3-202ENST00000412908 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
PSMA3-202ENST00000412908 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
PSMA3-202ENST00000412908 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
PSMA3-202ENST00000412908 ARIH1Q9Y4X5 557 aaPredicted RBP13.14□□□□□ -0.31
PSMA3-202ENST00000412908 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
PSMA3-202ENST00000412908 POTEMA6NI47 508 aa13.11□□□□□ -0.31
PSMA3-202ENST00000412908 SPDYE16A6NNV3 312 aaPredicted RBP13.1□□□□□ -0.31
PSMA3-202ENST00000412908 PDIA6Q15084 440 aa13.1□□□□□ -0.31
PSMA3-202ENST00000412908 VARS2Q5ST30 1063 aaKnown RBP13.1□□□□□ -0.31
PSMA3-202ENST00000412908 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
PSMA3-202ENST00000412908 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
PSMA3-202ENST00000412908 POTEB3A0JP26 581 aa13.06□□□□□ -0.32
PSMA3-202ENST00000412908 POTEBQ6S5H4 581 aa13.06□□□□□ -0.32
PSMA3-202ENST00000412908 DDX12PQ92771 950 aa13.06□□□□□ -0.32
PSMA3-202ENST00000412908 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
PSMA3-202ENST00000412908 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
PSMA3-202ENST00000412908 SEMA3EO15041 775 aa13.02□□□□□ -0.33
PSMA3-202ENST00000412908 PSDA5PKW4 1024 aaPredicted RBP13.01□□□□□ -0.33
PSMA3-202ENST00000412908 FOSBP53539 338 aa13□□□□□ -0.33
PSMA3-202ENST00000412908 PPP4R3BQ5MIZ7 849 aa13□□□□□ -0.33
PSMA3-202ENST00000412908 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
PSMA3-202ENST00000412908 PTGER2P43116 358 aa12.99□□□□□ -0.33
PSMA3-202ENST00000412908 JPH4Q96JJ6 628 aa12.99□□□□□ -0.33
PSMA3-202ENST00000412908 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
PSMA3-202ENST00000412908 MLLT3P42568 568 aaPredicted RBP12.98□□□□□ -0.33
PSMA3-202ENST00000412908 PHF14O94880 888 aa12.97□□□□□ -0.33
PSMA3-202ENST00000412908 NBR1Q14596 966 aa12.96□□□□□ -0.33
PSMA3-202ENST00000412908 ZNF687Q8N1G0 1237 aa12.95□□□□□ -0.34
PSMA3-202ENST00000412908 ZDHHC16Q969W1 377 aa12.95□□□□□ -0.34
PSMA3-202ENST00000412908 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
PSMA3-202ENST00000412908 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
PSMA3-202ENST00000412908 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
PSMA3-202ENST00000412908 EPAS1Q99814 870 aa12.93□□□□□ -0.34
PSMA3-202ENST00000412908 ADAM33Q9BZ11 813 aa12.92□□□□□ -0.34
PSMA3-202ENST00000412908 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
PSMA3-202ENST00000412908 TESPA1A2RU30 521 aaPredicted RBP12.9□□□□□ -0.34
PSMA3-202ENST00000412908 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
PSMA3-202ENST00000412908 OSBPP22059 807 aa12.89□□□□□ -0.35
PSMA3-202ENST00000412908 MAP3K7O43318 606 aa12.88□□□□□ -0.35
PSMA3-202ENST00000412908 KCNK17Q96T54 332 aa12.88□□□□□ -0.35
PSMA3-202ENST00000412908 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
PSMA3-202ENST00000412908 PSEN2P49810 448 aa12.87□□□□□ -0.35
PSMA3-202ENST00000412908 POTEEQ6S8J3 1075 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms