RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 ABCC5O15440 1437 aa18.65■□□□□ 0.58
CLINT1-201ENST00000411809 PLB1Q6P1J6 1458 aa18.65■□□□□ 0.58
CLINT1-201ENST00000411809 TROQ12816 1431 aaPredicted RBP18.64■□□□□ 0.57
CLINT1-201ENST00000411809 SHROOM2Q13796 1616 aa18.64■□□□□ 0.57
CLINT1-201ENST00000411809 ADGRL2O95490 1459 aa18.61■□□□□ 0.57
CLINT1-201ENST00000411809 GPATCH8Q9UKJ3 1502 aaKnown RBP18.6■□□□□ 0.57
CLINT1-201ENST00000411809 ABCC10Q5T3U5 1492 aa18.6■□□□□ 0.57
CLINT1-201ENST00000411809 CHD1O14646 1710 aa18.59■□□□□ 0.57
CLINT1-201ENST00000411809 CAMSAP2Q08AD1 1489 aa18.59■□□□□ 0.57
CLINT1-201ENST00000411809 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
CLINT1-201ENST00000411809 CARMIL2Q6F5E8 1435 aa18.54■□□□□ 0.56
CLINT1-201ENST00000411809 ATP10BO94823 1461 aa18.53■□□□□ 0.56
CLINT1-201ENST00000411809 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.55
CLINT1-201ENST00000411809 FKBP8Q14318 412 aa18.52■□□□□ 0.55
CLINT1-201ENST00000411809 TEX14Q8IWB6 1497 aa18.51■□□□□ 0.55
CLINT1-201ENST00000411809 PZPP20742 1482 aa18.51■□□□□ 0.55
CLINT1-201ENST00000411809 SHANK2Q9UPX8 1470 aa18.5■□□□□ 0.55
CLINT1-201ENST00000411809 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
CLINT1-201ENST00000411809 HIRIP3Q9BW71 556 aaPredicted RBP18.5■□□□□ 0.55
CLINT1-201ENST00000411809 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
CLINT1-201ENST00000411809 JPH4Q96JJ6 628 aa18.49■□□□□ 0.55
CLINT1-201ENST00000411809 ANP32EQ9BTT0 268 aa18.49■□□□□ 0.55
CLINT1-201ENST00000411809 RPRD2Q5VT52 1461 aaKnown RBP18.49■□□□□ 0.55
CLINT1-201ENST00000411809 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
CLINT1-201ENST00000411809 ANKRD30BQ9BXX2 1392 aa18.48■□□□□ 0.55
CLINT1-201ENST00000411809 ZNF644Q9H582 1327 aaPredicted RBP18.48■□□□□ 0.55
CLINT1-201ENST00000411809 NCOA1Q15788 1441 aa18.48■□□□□ 0.55
CLINT1-201ENST00000411809 RRP7BPQ9NSQ0 103 aa18.48■□□□□ 0.55
CLINT1-201ENST00000411809 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
CLINT1-201ENST00000411809 ARHGEF5Q12774 1597 aa18.48■□□□□ 0.55
CLINT1-201ENST00000411809 PREX2Q70Z35 1606 aa18.47■□□□□ 0.55
CLINT1-201ENST00000411809 KDM5DQ9BY66 1539 aa18.47■□□□□ 0.55
CLINT1-201ENST00000411809 MBD5Q9P267 1494 aa18.44■□□□□ 0.54
CLINT1-201ENST00000411809 MPHOSPH9Q99550 1183 aa18.43■□□□□ 0.54
CLINT1-201ENST00000411809 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
CLINT1-201ENST00000411809 CDK11AQ9UQ88 783 aaPredicted RBP18.42■□□□□ 0.54
CLINT1-201ENST00000411809 TRIM52Q96A61 297 aa18.42■□□□□ 0.54
CLINT1-201ENST00000411809 SAMD9LQ8IVG5 1584 aa18.41■□□□□ 0.54
CLINT1-201ENST00000411809 ARID3CA6NKF2 412 aa18.4■□□□□ 0.54
CLINT1-201ENST00000411809 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
CLINT1-201ENST00000411809 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
CLINT1-201ENST00000411809 SPATA31E1Q6ZUB1 1445 aa18.36■□□□□ 0.53
CLINT1-201ENST00000411809 ERCC6L2Q5T890 1561 aa18.36■□□□□ 0.53
CLINT1-201ENST00000411809 PTPRGP23470 1445 aa18.35■□□□□ 0.53
CLINT1-201ENST00000411809 TTC37Q6PGP7 1564 aa18.35■□□□□ 0.53
CLINT1-201ENST00000411809 CNGB1Q14028 1251 aaPredicted RBP18.34■□□□□ 0.53
CLINT1-201ENST00000411809 NEFLP07196 543 aa18.34■□□□□ 0.53
CLINT1-201ENST00000411809 ABCC2Q92887 1545 aa18.32■□□□□ 0.52
CLINT1-201ENST00000411809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLINT1-201ENST00000411809 CFDP1Q9UEE9 299 aaPredicted RBP18.31■□□□□ 0.52
CLINT1-201ENST00000411809 CCER2I3L3R5 266 aa18.3■□□□□ 0.52
CLINT1-201ENST00000411809 KIAA1107Q9UPP5 1409 aa18.3■□□□□ 0.52
CLINT1-201ENST00000411809 BCL11AQ9H165 835 aa18.3■□□□□ 0.52
CLINT1-201ENST00000411809 C9orf84Q5VXU9 1444 aa18.3■□□□□ 0.52
CLINT1-201ENST00000411809 UNC13BO14795 1591 aa18.3■□□□□ 0.52
CLINT1-201ENST00000411809 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
CLINT1-201ENST00000411809 PLXNC1O60486 1568 aa18.29■□□□□ 0.52
CLINT1-201ENST00000411809 FBLN2P98095 1184 aa18.28■□□□□ 0.52
CLINT1-201ENST00000411809 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
CLINT1-201ENST00000411809 ANKRD30AQ9BXX3 1397 aa18.27■□□□□ 0.52
CLINT1-201ENST00000411809 RBM19Q9Y4C8 960 aaKnown RBP18.27■□□□□ 0.52
CLINT1-201ENST00000411809 ANKRD50Q9ULJ7 1429 aa18.27■□□□□ 0.51
CLINT1-201ENST00000411809 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
CLINT1-201ENST00000411809 ZCCHC11Q5TAX3 1644 aaKnown RBP18.26■□□□□ 0.51
CLINT1-201ENST00000411809 FOXD1Q16676 465 aa18.26■□□□□ 0.51
CLINT1-201ENST00000411809 UHRF1BP1LA0JNW5 1464 aa18.25■□□□□ 0.51
CLINT1-201ENST00000411809 KDM5CP41229 1560 aa18.25■□□□□ 0.51
CLINT1-201ENST00000411809 UHRF1BP1Q6BDS2 1440 aa18.24■□□□□ 0.51
CLINT1-201ENST00000411809 ARHGEF12Q9NZN5 1544 aa18.24■□□□□ 0.51
CLINT1-201ENST00000411809 BCORL1Q5H9F3 1711 aa18.24■□□□□ 0.51
CLINT1-201ENST00000411809 CCDC141Q6ZP82 1450 aa18.24■□□□□ 0.51
CLINT1-201ENST00000411809 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
CLINT1-201ENST00000411809 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
CLINT1-201ENST00000411809 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
CLINT1-201ENST00000411809 HSPA5P11021 654 aaKnown RBP18.22■□□□□ 0.51
CLINT1-201ENST00000411809 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
CLINT1-201ENST00000411809 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
CLINT1-201ENST00000411809 ANP32CO43423 234 aa18.2■□□□□ 0.5
CLINT1-201ENST00000411809 IQGAP3Q86VI3 1631 aa18.2■□□□□ 0.5
CLINT1-201ENST00000411809 CNTLNQ9NXG0 1405 aa18.19■□□□□ 0.5
CLINT1-201ENST00000411809 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
CLINT1-201ENST00000411809 FAM135AQ9P2D6 1515 aa18.17■□□□□ 0.5
CLINT1-201ENST00000411809 C11orf95C9JLR9 678 aaPredicted RBP18.16■□□□□ 0.5
CLINT1-201ENST00000411809 CCDC7Q96M83 1385 aa18.16■□□□□ 0.5
CLINT1-201ENST00000411809 RALGAPBQ86X10 1494 aa18.15■□□□□ 0.5
CLINT1-201ENST00000411809 ARAP3Q8WWN8 1544 aa18.14■□□□□ 0.49
CLINT1-201ENST00000411809 KIF15Q9NS87 1388 aa18.14■□□□□ 0.49
CLINT1-201ENST00000411809 E9PCH4 1651 aa18.14■□□□□ 0.49
CLINT1-201ENST00000411809 EIF4G2P78344 907 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLINT1-201ENST00000411809 ABCC1P33527 1531 aa18.13■□□□□ 0.49
CLINT1-201ENST00000411809 TRPM1Q7Z4N2 1603 aa18.12■□□□□ 0.49
CLINT1-201ENST00000411809 ARHGAP5Q13017 1502 aa18.11■□□□□ 0.49
CLINT1-201ENST00000411809 LAMC1P11047 1609 aa18.11■□□□□ 0.49
CLINT1-201ENST00000411809 PLEKHH2Q8IVE3 1493 aa18.1■□□□□ 0.49
CLINT1-201ENST00000411809 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
CLINT1-201ENST00000411809 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
CLINT1-201ENST00000411809 PLA2R1Q13018 1463 aa18.09■□□□□ 0.49
CLINT1-201ENST00000411809 ATP10AO60312 1499 aa18.08■□□□□ 0.49
CLINT1-201ENST00000411809 DEPDC5O75140 1603 aa18.08■□□□□ 0.48
CLINT1-201ENST00000411809 HNRNPUQ00839 825 aaKnown RBP eCLIP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms