RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MLECQ14165 292 aa27.6■■■□□ 2.01
MRPL55-220ENST00000411464 ZMYM4Q5VZL5 1548 aa27.6■■■□□ 2.01
MRPL55-220ENST00000411464 LMTK3Q96Q04 1460 aa27.58■■■□□ 2.01
MRPL55-220ENST00000411464 HSPA2P54652 639 aa27.54■■■□□ 2
MRPL55-220ENST00000411464 RIMS1Q86UR5 1692 aaKnown RBP27.53■■■□□ 2
MRPL55-220ENST00000411464 HECW1Q76N89 1606 aa27.53■■■□□ 2
MRPL55-220ENST00000411464 ARHGAP35Q9NRY4 1499 aa27.53■■■□□ 2
MRPL55-220ENST00000411464 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
MRPL55-220ENST00000411464 ATP10AO60312 1499 aa27.48■■□□□ 1.99
MRPL55-220ENST00000411464 TROQ12816 1431 aaPredicted RBP27.46■■□□□ 1.99
MRPL55-220ENST00000411464 CLIP1P30622 1438 aa27.45■■□□□ 1.98
MRPL55-220ENST00000411464 MYT1LQ9UL68 1186 aa27.45■■□□□ 1.98
MRPL55-220ENST00000411464 C9orf84Q5VXU9 1444 aa27.44■■□□□ 1.98
MRPL55-220ENST00000411464 AFAP1Q8N556 730 aa27.44■■□□□ 1.98
MRPL55-220ENST00000411464 SIGLEC1Q9BZZ2 1709 aa27.41■■□□□ 1.98
MRPL55-220ENST00000411464 ZNF518AQ6AHZ1 1483 aa27.4■■□□□ 1.98
MRPL55-220ENST00000411464 KIF14Q15058 1648 aa27.4■■□□□ 1.98
MRPL55-220ENST00000411464 ARHGAP5Q13017 1502 aa27.4■■□□□ 1.98
MRPL55-220ENST00000411464 MYO5CQ9NQX4 1742 aa27.38■■□□□ 1.97
MRPL55-220ENST00000411464 CEBPAP49715 358 aaPredicted RBP27.37■■□□□ 1.97
MRPL55-220ENST00000411464 ARHGEF12Q9NZN5 1544 aa27.36■■□□□ 1.97
MRPL55-220ENST00000411464 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
MRPL55-220ENST00000411464 CERKQ8TCT0 537 aa27.3■■□□□ 1.96
MRPL55-220ENST00000411464 KDM5CP41229 1560 aa27.28■■□□□ 1.96
MRPL55-220ENST00000411464 CASKIN1Q8WXD9 1431 aa27.28■■□□□ 1.96
MRPL55-220ENST00000411464 ESF1Q9H501 851 aaKnown RBP27.27■■□□□ 1.96
MRPL55-220ENST00000411464 CCDC18Q5T9S5 1454 aa27.26■■□□□ 1.95
MRPL55-220ENST00000411464 MLH3Q9UHC1 1453 aa27.25■■□□□ 1.95
MRPL55-220ENST00000411464 DMRT2Q9Y5R5 561 aa27.24■■□□□ 1.95
MRPL55-220ENST00000411464 TRAPPC8Q9Y2L5 1435 aa27.23■■□□□ 1.95
MRPL55-220ENST00000411464 UHRF1BP1Q6BDS2 1440 aa27.2■■□□□ 1.94
MRPL55-220ENST00000411464 DIP2CQ9Y2E4 1556 aa27.2■■□□□ 1.94
MRPL55-220ENST00000411464 ZNF777Q9ULD5 760 aaPredicted RBP27.19■■□□□ 1.94
MRPL55-220ENST00000411464 LRRIQ1Q96JM4 1722 aa27.18■■□□□ 1.94
MRPL55-220ENST00000411464 REREQ9P2R6 1566 aa27.17■■□□□ 1.94
MRPL55-220ENST00000411464 CDC42BPBQ9Y5S2 1711 aa27.16■■□□□ 1.94
MRPL55-220ENST00000411464 PREX1Q8TCU6 1659 aa27.16■■□□□ 1.94
MRPL55-220ENST00000411464 ABCC1P33527 1531 aa27.16■■□□□ 1.94
MRPL55-220ENST00000411464 PREX2Q70Z35 1606 aa27.14■■□□□ 1.94
MRPL55-220ENST00000411464 AGLP35573 1532 aa27.14■■□□□ 1.94
MRPL55-220ENST00000411464 FYCO1Q9BQS8 1478 aa27.13■■□□□ 1.93
MRPL55-220ENST00000411464 ABCA6Q8N139 1617 aa27.12■■□□□ 1.93
MRPL55-220ENST00000411464 HNRNPMP52272 730 aaKnown RBP eCLIP27.09■■□□□ 1.93
MRPL55-220ENST00000411464 SPAG9O60271 1321 aaKnown RBP27.09■■□□□ 1.93
MRPL55-220ENST00000411464 CNTLNQ9NXG0 1405 aa27.07■■□□□ 1.92
MRPL55-220ENST00000411464 CFDP1Q9UEE9 299 aaPredicted RBP27.07■■□□□ 1.92
MRPL55-220ENST00000411464 ITSN2Q9NZM3 1697 aa27.05■■□□□ 1.92
MRPL55-220ENST00000411464 GPATCH8Q9UKJ3 1502 aaKnown RBP27.05■■□□□ 1.92
MRPL55-220ENST00000411464 SETD1BQ9UPS6 1966 aaKnown RBP27.04■■□□□ 1.92
MRPL55-220ENST00000411464 KIDINS220Q9ULH0 1771 aa27.02■■□□□ 1.92
MRPL55-220ENST00000411464 CCNB3Q8WWL7 1395 aa27.01■■□□□ 1.91
MRPL55-220ENST00000411464 SAMD9LQ8IVG5 1584 aa27.01■■□□□ 1.91
MRPL55-220ENST00000411464 PTPRTO14522 1441 aa27■■□□□ 1.91
MRPL55-220ENST00000411464 CDC42BPAQ5VT25 1732 aa27■■□□□ 1.91
MRPL55-220ENST00000411464 KIAA1107Q9UPP5 1409 aa26.99■■□□□ 1.91
MRPL55-220ENST00000411464 C3P01024 1663 aa26.99■■□□□ 1.91
MRPL55-220ENST00000411464 SYCP2Q9BX26 1530 aa26.99■■□□□ 1.91
MRPL55-220ENST00000411464 STRCQ7RTU9 1775 aa26.99■■□□□ 1.91
MRPL55-220ENST00000411464 ZMYM3Q14202 1370 aa26.97■■□□□ 1.91
MRPL55-220ENST00000411464 MTUS2Q5JR59 1369 aa26.97■■□□□ 1.91
MRPL55-220ENST00000411464 PLEKHH2Q8IVE3 1493 aa26.97■■□□□ 1.91
MRPL55-220ENST00000411464 NPATQ14207 1427 aa26.94■■□□□ 1.9
MRPL55-220ENST00000411464 GGT6Q6P531 493 aa26.92■■□□□ 1.9
MRPL55-220ENST00000411464 NCOA1Q15788 1441 aa26.9■■□□□ 1.9
MRPL55-220ENST00000411464 A2MP01023 1474 aa26.9■■□□□ 1.9
MRPL55-220ENST00000411464 ATP7AQ04656 1500 aa26.9■■□□□ 1.9
MRPL55-220ENST00000411464 PPP6R1Q9UPN7 881 aa26.87■■□□□ 1.89
MRPL55-220ENST00000411464 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
MRPL55-220ENST00000411464 NCKAP5LQ9HCH0 1330 aa26.84■■□□□ 1.89
MRPL55-220ENST00000411464 SUPT6HQ7KZ85 1726 aaKnown RBP26.83■■□□□ 1.89
MRPL55-220ENST00000411464 MROH2AA6NES4 1674 aa26.82■■□□□ 1.88
MRPL55-220ENST00000411464 CAMSAP1Q5T5Y3 1602 aa26.82■■□□□ 1.88
MRPL55-220ENST00000411464 INO80Q9ULG1 1556 aaPredicted RBP26.81■■□□□ 1.88
MRPL55-220ENST00000411464 DISP3Q9P2K9 1392 aa26.81■■□□□ 1.88
MRPL55-220ENST00000411464 PLXNC1O60486 1568 aa26.8■■□□□ 1.88
MRPL55-220ENST00000411464 PKD2Q13563 968 aa26.8■■□□□ 1.88
MRPL55-220ENST00000411464 PTPRKQ15262 1439 aa26.79■■□□□ 1.88
MRPL55-220ENST00000411464 LTBP4Q8N2S1 1624 aa26.79■■□□□ 1.88
MRPL55-220ENST00000411464 MBD5Q9P267 1494 aa26.77■■□□□ 1.88
MRPL55-220ENST00000411464 RTEL1-TNFRSF6BF6WH68 1400 aa26.75■■□□□ 1.87
MRPL55-220ENST00000411464 CEP162Q5TB80 1403 aa26.75■■□□□ 1.87
MRPL55-220ENST00000411464 EHBP1L1Q8N3D4 1523 aa26.75■■□□□ 1.87
MRPL55-220ENST00000411464 IQSEC2Q5JU85 1478 aa26.74■■□□□ 1.87
MRPL55-220ENST00000411464 DHX29Q7Z478 1369 aaKnown RBP26.74■■□□□ 1.87
MRPL55-220ENST00000411464 CLTCQ00610 1675 aaKnown RBP26.74■■□□□ 1.87
MRPL55-220ENST00000411464 ZNF335Q9H4Z2 1342 aaPredicted RBP26.73■■□□□ 1.87
MRPL55-220ENST00000411464 TIAM1Q13009 1591 aa26.73■■□□□ 1.87
MRPL55-220ENST00000411464 RSPH4AQ5TD94 716 aa26.72■■□□□ 1.87
MRPL55-220ENST00000411464 PLA2R1Q13018 1463 aa26.72■■□□□ 1.87
MRPL55-220ENST00000411464 KIF3BO15066 747 aa26.71■■□□□ 1.87
MRPL55-220ENST00000411464 ILDR2Q71H61 639 aa26.68■■□□□ 1.86
MRPL55-220ENST00000411464 ADGBQ8N7X0 1667 aa26.68■■□□□ 1.86
MRPL55-220ENST00000411464 CEP170BQ9Y4F5 1589 aaPredicted RBP26.67■■□□□ 1.86
MRPL55-220ENST00000411464 UBAP1LF5GYI3 381 aa26.67■■□□□ 1.86
MRPL55-220ENST00000411464 MYO3AQ8NEV4 1616 aa26.67■■□□□ 1.86
MRPL55-220ENST00000411464 TCOF1Q13428 1488 aaKnown RBP26.66■■□□□ 1.86
MRPL55-220ENST00000411464 TSPY4P0CV99 314 aa26.64■■□□□ 1.86
MRPL55-220ENST00000411464 TSPY10P0CW01 314 aa26.64■■□□□ 1.86
MRPL55-220ENST00000411464 FBXO31Q5XUX0 539 aaPredicted RBP26.64■■□□□ 1.86
MRPL55-220ENST00000411464 WASHC2CQ9Y4E1 1318 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms