RNA–Protein interactions for RNA: ENST00000411297.1

RN7SKP270-201, Transcript of RNA, 7SK small nuclear pseudogene 270, humanhuman

BASIC

Gene RN7SKP270, Length 312 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP270-201ENST00000411297 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
RN7SKP270-201ENST00000411297 HECW1Q76N89 1606 aa17.26■□□□□ 0.35
RN7SKP270-201ENST00000411297 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
RN7SKP270-201ENST00000411297 PRXQ9BXM0 1461 aa17.25■□□□□ 0.35
RN7SKP270-201ENST00000411297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.23■□□□□ 0.35
RN7SKP270-201ENST00000411297 ARHGEF12Q9NZN5 1544 aa17.23■□□□□ 0.35
RN7SKP270-201ENST00000411297 CEBPAP49715 358 aaPredicted RBP17.21■□□□□ 0.35
RN7SKP270-201ENST00000411297 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
RN7SKP270-201ENST00000411297 UHRF1BP1Q6BDS2 1440 aa17.19■□□□□ 0.34
RN7SKP270-201ENST00000411297 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
RN7SKP270-201ENST00000411297 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
RN7SKP270-201ENST00000411297 C9orf84Q5VXU9 1444 aa17.15■□□□□ 0.34
RN7SKP270-201ENST00000411297 PLEKHD1A6NEE1 506 aa17.15■□□□□ 0.34
RN7SKP270-201ENST00000411297 SCAPERQ9BY12 1400 aa17.14■□□□□ 0.33
RN7SKP270-201ENST00000411297 ATP10AO60312 1499 aa17.13■□□□□ 0.33
RN7SKP270-201ENST00000411297 LTBP4Q8N2S1 1624 aa17.13■□□□□ 0.33
RN7SKP270-201ENST00000411297 C3P01024 1663 aa17.11■□□□□ 0.33
RN7SKP270-201ENST00000411297 PTPRTO14522 1441 aa17.11■□□□□ 0.33
RN7SKP270-201ENST00000411297 CDK13Q14004 1512 aaKnown RBP17.1■□□□□ 0.33
RN7SKP270-201ENST00000411297 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.32
RN7SKP270-201ENST00000411297 IQSEC2Q5JU85 1478 aa17.06■□□□□ 0.32
RN7SKP270-201ENST00000411297 SETD1BQ9UPS6 1966 aaKnown RBP17.06■□□□□ 0.32
RN7SKP270-201ENST00000411297 PLCH2O75038 1416 aa17.04■□□□□ 0.32
RN7SKP270-201ENST00000411297 DIP2CQ9Y2E4 1556 aa17.04■□□□□ 0.32
RN7SKP270-201ENST00000411297 MYT1LQ9UL68 1186 aa17.03■□□□□ 0.32
RN7SKP270-201ENST00000411297 ABCA6Q8N139 1617 aa17.02■□□□□ 0.31
RN7SKP270-201ENST00000411297 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
RN7SKP270-201ENST00000411297 NCOA1Q15788 1441 aa17.01■□□□□ 0.31
RN7SKP270-201ENST00000411297 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
RN7SKP270-201ENST00000411297 KDM5CP41229 1560 aa17■□□□□ 0.31
RN7SKP270-201ENST00000411297 KIF14Q15058 1648 aa16.99■□□□□ 0.31
RN7SKP270-201ENST00000411297 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
RN7SKP270-201ENST00000411297 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
RN7SKP270-201ENST00000411297 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
RN7SKP270-201ENST00000411297 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
RN7SKP270-201ENST00000411297 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
RN7SKP270-201ENST00000411297 REREQ9P2R6 1566 aa16.96■□□□□ 0.31
RN7SKP270-201ENST00000411297 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.3
RN7SKP270-201ENST00000411297 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.3
RN7SKP270-201ENST00000411297 AFAP1Q8N556 730 aa16.95■□□□□ 0.3
RN7SKP270-201ENST00000411297 SUPT6HQ7KZ85 1726 aaKnown RBP16.93■□□□□ 0.3
RN7SKP270-201ENST00000411297 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
RN7SKP270-201ENST00000411297 ATP1B4Q9UN42 357 aaPredicted RBP16.93■□□□□ 0.3
RN7SKP270-201ENST00000411297 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
RN7SKP270-201ENST00000411297 NCKAP5LQ9HCH0 1330 aa16.91■□□□□ 0.3
RN7SKP270-201ENST00000411297 AGLP35573 1532 aa16.91■□□□□ 0.3
RN7SKP270-201ENST00000411297 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
RN7SKP270-201ENST00000411297 ITSN2Q9NZM3 1697 aa16.88■□□□□ 0.29
RN7SKP270-201ENST00000411297 CDC42BPBQ9Y5S2 1711 aa16.88■□□□□ 0.29
RN7SKP270-201ENST00000411297 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
RN7SKP270-201ENST00000411297 ZNF142P52746 1687 aaPredicted RBP16.87■□□□□ 0.29
RN7SKP270-201ENST00000411297 CNTLNQ9NXG0 1405 aa16.87■□□□□ 0.29
RN7SKP270-201ENST00000411297 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
RN7SKP270-201ENST00000411297 KIDINS220Q9ULH0 1771 aa16.86■□□□□ 0.29
RN7SKP270-201ENST00000411297 ABCC1P33527 1531 aa16.86■□□□□ 0.29
RN7SKP270-201ENST00000411297 HSPA1LP34931 641 aa16.84■□□□□ 0.29
RN7SKP270-201ENST00000411297 PIP4K2BP78356 416 aa16.84■□□□□ 0.29
RN7SKP270-201ENST00000411297 NPATQ14207 1427 aa16.84■□□□□ 0.29
RN7SKP270-201ENST00000411297 PREX2Q70Z35 1606 aa16.84■□□□□ 0.29
RN7SKP270-201ENST00000411297 CLTCQ00610 1675 aaKnown RBP16.84■□□□□ 0.29
RN7SKP270-201ENST00000411297 TROQ12816 1431 aaPredicted RBP16.83■□□□□ 0.28
RN7SKP270-201ENST00000411297 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.28
RN7SKP270-201ENST00000411297 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
RN7SKP270-201ENST00000411297 CEP170BQ9Y4F5 1589 aaPredicted RBP16.83■□□□□ 0.28
RN7SKP270-201ENST00000411297 CLIP1P30622 1438 aa16.82■□□□□ 0.28
RN7SKP270-201ENST00000411297 PLA2R1Q13018 1463 aa16.8■□□□□ 0.28
RN7SKP270-201ENST00000411297 CDK11AQ9UQ88 783 aaPredicted RBP16.8■□□□□ 0.28
RN7SKP270-201ENST00000411297 TCOF1Q13428 1488 aaKnown RBP16.79■□□□□ 0.28
RN7SKP270-201ENST00000411297 FMN1Q68DA7 1419 aa16.78■□□□□ 0.28
RN7SKP270-201ENST00000411297 ZMYM3Q14202 1370 aa16.77■□□□□ 0.28
RN7SKP270-201ENST00000411297 EHMT2Q96KQ7 1210 aa16.77■□□□□ 0.28
RN7SKP270-201ENST00000411297 ADRA2BP18089 450 aa16.76■□□□□ 0.27
RN7SKP270-201ENST00000411297 PKD2Q13563 968 aa16.76■□□□□ 0.27
RN7SKP270-201ENST00000411297 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
RN7SKP270-201ENST00000411297 EEA1Q15075 1411 aa16.75■□□□□ 0.27
RN7SKP270-201ENST00000411297 SAMD9LQ8IVG5 1584 aa16.75■□□□□ 0.27
RN7SKP270-201ENST00000411297 CDC42BPAQ5VT25 1732 aa16.74■□□□□ 0.27
RN7SKP270-201ENST00000411297 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
RN7SKP270-201ENST00000411297 ARHGAP35Q9NRY4 1499 aa16.72■□□□□ 0.27
RN7SKP270-201ENST00000411297 CPS1P31327 1500 aa16.71■□□□□ 0.27
RN7SKP270-201ENST00000411297 SYCP2Q9BX26 1530 aa16.71■□□□□ 0.27
RN7SKP270-201ENST00000411297 TOM1O60784 492 aa16.71■□□□□ 0.27
RN7SKP270-201ENST00000411297 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
RN7SKP270-201ENST00000411297 NEURL4Q96JN8 1562 aa16.69■□□□□ 0.26
RN7SKP270-201ENST00000411297 ATP7AQ04656 1500 aa16.69■□□□□ 0.26
RN7SKP270-201ENST00000411297 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
RN7SKP270-201ENST00000411297 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
RN7SKP270-201ENST00000411297 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
RN7SKP270-201ENST00000411297 A2ML1A8K2U0 1454 aa16.67■□□□□ 0.26
RN7SKP270-201ENST00000411297 ALKQ9UM73 1620 aa16.67■□□□□ 0.26
RN7SKP270-201ENST00000411297 INO80Q9ULG1 1556 aaPredicted RBP16.66■□□□□ 0.26
RN7SKP270-201ENST00000411297 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
RN7SKP270-201ENST00000411297 GGT6Q6P531 493 aa16.65■□□□□ 0.26
RN7SKP270-201ENST00000411297 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
RN7SKP270-201ENST00000411297 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
RN7SKP270-201ENST00000411297 A2MP01023 1474 aa16.64■□□□□ 0.25
RN7SKP270-201ENST00000411297 VWDEQ8N2E2 1590 aa16.63■□□□□ 0.25
RN7SKP270-201ENST00000411297 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
RN7SKP270-201ENST00000411297 HNRNPMP52272 730 aaKnown RBP eCLIP16.61■□□□□ 0.25
RN7SKP270-201ENST00000411297 ADGBQ8N7X0 1667 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms