RNA–Protein interactions for RNA: ENST00000411297.1

RN7SKP270-201, Transcript of RNA, 7SK small nuclear pseudogene 270, humanhuman

BASIC

Gene RN7SKP270, Length 312 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP270-201ENST00000411297 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
RN7SKP270-201ENST00000411297 ABCC9O60706 1549 aa24.15■■□□□ 1.46
RN7SKP270-201ENST00000411297 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
RN7SKP270-201ENST00000411297 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
RN7SKP270-201ENST00000411297 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
RN7SKP270-201ENST00000411297 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
RN7SKP270-201ENST00000411297 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
RN7SKP270-201ENST00000411297 NACADO15069 1562 aa22.32■■□□□ 1.16
RN7SKP270-201ENST00000411297 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
RN7SKP270-201ENST00000411297 DCAF8L2P0C7V8 631 aa22.14■■□□□ 1.13
RN7SKP270-201ENST00000411297 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
RN7SKP270-201ENST00000411297 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
RN7SKP270-201ENST00000411297 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.07
RN7SKP270-201ENST00000411297 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
RN7SKP270-201ENST00000411297 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
RN7SKP270-201ENST00000411297 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
RN7SKP270-201ENST00000411297 EIF4G1Q04637 1599 aaKnown RBP21.55■■□□□ 1.04
RN7SKP270-201ENST00000411297 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
RN7SKP270-201ENST00000411297 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
RN7SKP270-201ENST00000411297 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
RN7SKP270-201ENST00000411297 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
RN7SKP270-201ENST00000411297 CUX2O14529 1486 aa20.98■□□□□ 0.95
RN7SKP270-201ENST00000411297 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
RN7SKP270-201ENST00000411297 NESP48681 1621 aa20.57■□□□□ 0.88
RN7SKP270-201ENST00000411297 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
RN7SKP270-201ENST00000411297 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
RN7SKP270-201ENST00000411297 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
RN7SKP270-201ENST00000411297 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
RN7SKP270-201ENST00000411297 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
RN7SKP270-201ENST00000411297 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
RN7SKP270-201ENST00000411297 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
RN7SKP270-201ENST00000411297 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
RN7SKP270-201ENST00000411297 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
RN7SKP270-201ENST00000411297 LAMC3Q9Y6N6 1575 aa20.27■□□□□ 0.84
RN7SKP270-201ENST00000411297 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
RN7SKP270-201ENST00000411297 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
RN7SKP270-201ENST00000411297 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.81
RN7SKP270-201ENST00000411297 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
RN7SKP270-201ENST00000411297 WDR62O43379 1518 aa20.02■□□□□ 0.8
RN7SKP270-201ENST00000411297 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
RN7SKP270-201ENST00000411297 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
RN7SKP270-201ENST00000411297 OSCARQ8IYS5 282 aa19.87■□□□□ 0.77
RN7SKP270-201ENST00000411297 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
RN7SKP270-201ENST00000411297 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
RN7SKP270-201ENST00000411297 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
RN7SKP270-201ENST00000411297 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
RN7SKP270-201ENST00000411297 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
RN7SKP270-201ENST00000411297 WIZO95785 1651 aa19.75■□□□□ 0.75
RN7SKP270-201ENST00000411297 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
RN7SKP270-201ENST00000411297 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
RN7SKP270-201ENST00000411297 CFTRP13569 1480 aa19.59■□□□□ 0.73
RN7SKP270-201ENST00000411297 ZNF608Q9ULD9 1512 aaPredicted RBP19.53■□□□□ 0.72
RN7SKP270-201ENST00000411297 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
RN7SKP270-201ENST00000411297 CYB5RLQ6IPT4 315 aa19.51■□□□□ 0.71
RN7SKP270-201ENST00000411297 PRDM2Q13029 1718 aa19.47■□□□□ 0.71
RN7SKP270-201ENST00000411297 IFT140Q96RY7 1462 aa19.45■□□□□ 0.7
RN7SKP270-201ENST00000411297 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
RN7SKP270-201ENST00000411297 CHD1O14646 1710 aa19.44■□□□□ 0.7
RN7SKP270-201ENST00000411297 ARAP1Q96P48 1450 aa19.42■□□□□ 0.7
RN7SKP270-201ENST00000411297 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
RN7SKP270-201ENST00000411297 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
RN7SKP270-201ENST00000411297 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.68
RN7SKP270-201ENST00000411297 FBLN2P98095 1184 aa19.27■□□□□ 0.68
RN7SKP270-201ENST00000411297 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.67
RN7SKP270-201ENST00000411297 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
RN7SKP270-201ENST00000411297 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
RN7SKP270-201ENST00000411297 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
RN7SKP270-201ENST00000411297 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
RN7SKP270-201ENST00000411297 CLASP1Q7Z460 1538 aa19.11■□□□□ 0.65
RN7SKP270-201ENST00000411297 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
RN7SKP270-201ENST00000411297 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
RN7SKP270-201ENST00000411297 SNAPC4Q5SXM2 1469 aa19.08■□□□□ 0.64
RN7SKP270-201ENST00000411297 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
RN7SKP270-201ENST00000411297 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
RN7SKP270-201ENST00000411297 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
RN7SKP270-201ENST00000411297 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
RN7SKP270-201ENST00000411297 SOGA1O94964 1423 aa18.96■□□□□ 0.63
RN7SKP270-201ENST00000411297 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
RN7SKP270-201ENST00000411297 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
RN7SKP270-201ENST00000411297 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
RN7SKP270-201ENST00000411297 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
RN7SKP270-201ENST00000411297 FGD5Q6ZNL6 1462 aa18.91■□□□□ 0.62
RN7SKP270-201ENST00000411297 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
RN7SKP270-201ENST00000411297 PBRM1Q86U86 1689 aa18.89■□□□□ 0.61
RN7SKP270-201ENST00000411297 GRIN2BQ13224 1484 aa18.88■□□□□ 0.61
RN7SKP270-201ENST00000411297 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
RN7SKP270-201ENST00000411297 CUX1P39880 1505 aa18.79■□□□□ 0.6
RN7SKP270-201ENST00000411297 KIF13AQ9H1H9 1805 aa18.77■□□□□ 0.59
RN7SKP270-201ENST00000411297 CEP170Q5SW79 1584 aa18.71■□□□□ 0.59
RN7SKP270-201ENST00000411297 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.58
RN7SKP270-201ENST00000411297 GRIN2AQ12879 1464 aa18.66■□□□□ 0.58
RN7SKP270-201ENST00000411297 ADAMTS12P58397 1594 aa18.63■□□□□ 0.57
RN7SKP270-201ENST00000411297 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
RN7SKP270-201ENST00000411297 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
RN7SKP270-201ENST00000411297 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
RN7SKP270-201ENST00000411297 NUP160Q12769 1436 aa18.57■□□□□ 0.56
RN7SKP270-201ENST00000411297 KDM6BO15054 1643 aa18.52■□□□□ 0.56
RN7SKP270-201ENST00000411297 KDM4FA0A1W2PPD8 638 aa18.51■□□□□ 0.55
RN7SKP270-201ENST00000411297 FAM69CQ0P6D2 419 aa18.51■□□□□ 0.55
RN7SKP270-201ENST00000411297 DIP2BQ9P265 1576 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms