RNA–Protein interactions for RNA: ENST00000410513.1

RN7SKP56-201, Transcript of RNA, 7SK small nuclear pseudogene 56, humanhuman

BASIC

Gene RN7SKP56, Length 331 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP56-201ENST00000410513 CADPS2Q86UW7 1296 aa10.15□□□□□ -0.78
RN7SKP56-201ENST00000410513 KIF3CO14782 793 aa10.12□□□□□ -0.79
RN7SKP56-201ENST00000410513 C2orf72A6NCS6 295 aa10.11□□□□□ -0.79
RN7SKP56-201ENST00000410513 PLCB2Q00722 1185 aa10.11□□□□□ -0.79
RN7SKP56-201ENST00000410513 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
RN7SKP56-201ENST00000410513 CRISPLD2Q9H0B8 497 aa10.08□□□□□ -0.8
RN7SKP56-201ENST00000410513 TSHZ2Q9NRE2 1034 aa10.07□□□□□ -0.8
RN7SKP56-201ENST00000410513 TMC2Q8TDI7 906 aa10.05□□□□□ -0.8
RN7SKP56-201ENST00000410513 GPHNQ9NQX3 736 aaPredicted RBP10.05□□□□□ -0.8
RN7SKP56-201ENST00000410513 HOXB3P14651 431 aaPredicted RBP10.03□□□□□ -0.8
RN7SKP56-201ENST00000410513 DSG2Q14126 1118 aa10.02□□□□□ -0.81
RN7SKP56-201ENST00000410513 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
RN7SKP56-201ENST00000410513 FOXK1P85037 733 aa10□□□□□ -0.81
RN7SKP56-201ENST00000410513 LARP6Q9BRS8 491 aaKnown RBP10□□□□□ -0.81
RN7SKP56-201ENST00000410513 PDE4AP27815 886 aa9.99□□□□□ -0.81
RN7SKP56-201ENST00000410513 MFSD10Q14728 455 aa9.98□□□□□ -0.81
RN7SKP56-201ENST00000410513 PLPP6Q8IY26 295 aa9.98□□□□□ -0.81
RN7SKP56-201ENST00000410513 FAM163AQ96GL9 167 aaPredicted RBP9.97□□□□□ -0.81
RN7SKP56-201ENST00000410513 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.82
RN7SKP56-201ENST00000410513 SNPHO15079 494 aa9.95□□□□□ -0.82
RN7SKP56-201ENST00000410513 ST18O60284 1047 aa9.95□□□□□ -0.82
RN7SKP56-201ENST00000410513 HAP1P54257 671 aaPredicted RBP9.94□□□□□ -0.82
RN7SKP56-201ENST00000410513 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
RN7SKP56-201ENST00000410513 DOK7Q18PE1 504 aa9.93□□□□□ -0.82
RN7SKP56-201ENST00000410513 SLC34A2O95436 690 aa9.9□□□□□ -0.82
RN7SKP56-201ENST00000410513 GPR153Q6NV75 609 aa9.89□□□□□ -0.83
RN7SKP56-201ENST00000410513 KHSRPQ92945 711 aaKnown RBP eCLIP9.89□□□□□ -0.83
RN7SKP56-201ENST00000410513 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
RN7SKP56-201ENST00000410513 EMILIN3Q9NT22 766 aa9.88□□□□□ -0.83
RN7SKP56-201ENST00000410513 ARSIQ5FYB1 569 aa9.87□□□□□ -0.83
RN7SKP56-201ENST00000410513 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
RN7SKP56-201ENST00000410513 CAMK2BQ13554 666 aa9.86□□□□□ -0.83
RN7SKP56-201ENST00000410513 OXER1Q8TDS5 423 aa9.86□□□□□ -0.83
RN7SKP56-201ENST00000410513 PTCD2Q8WV60 388 aaKnown RBP9.86□□□□□ -0.83
RN7SKP56-201ENST00000410513 UPF1Q92900 1129 aaKnown RBP eCLIP9.86□□□□□ -0.83
RN7SKP56-201ENST00000410513 MARVELD3Q96A59 401 aa9.86□□□□□ -0.83
RN7SKP56-201ENST00000410513 KDM2AQ9Y2K7 1162 aa9.86□□□□□ -0.83
RN7SKP56-201ENST00000410513 PCDHGA4Q9Y5G9 962 aa9.86□□□□□ -0.83
RN7SKP56-201ENST00000410513 RIMBP2O15034 1052 aa9.85□□□□□ -0.83
RN7SKP56-201ENST00000410513 ZSWIM6Q9HCJ5 1215 aa9.85□□□□□ -0.83
RN7SKP56-201ENST00000410513 KDM4FA0A1W2PPD8 638 aa9.82□□□□□ -0.84
RN7SKP56-201ENST00000410513 WDR70Q9NW82 654 aa9.82□□□□□ -0.84
RN7SKP56-201ENST00000410513 NUDT7P0C024 238 aa9.81□□□□□ -0.84
RN7SKP56-201ENST00000410513 E2F4Q16254 413 aa9.8□□□□□ -0.84
RN7SKP56-201ENST00000410513 EMP3P54852 163 aa9.79□□□□□ -0.84
RN7SKP56-201ENST00000410513 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
RN7SKP56-201ENST00000410513 POTEB3A0JP26 581 aa9.78□□□□□ -0.84
RN7SKP56-201ENST00000410513 POTEMA6NI47 508 aa9.78□□□□□ -0.84
RN7SKP56-201ENST00000410513 POTEBQ6S5H4 581 aa9.78□□□□□ -0.84
RN7SKP56-201ENST00000410513 DPYSL4O14531 572 aa9.77□□□□□ -0.85
RN7SKP56-201ENST00000410513 VSIG10Q8N0Z9 540 aa9.76□□□□□ -0.85
RN7SKP56-201ENST00000410513 KCNV2Q8TDN2 545 aa9.76□□□□□ -0.85
RN7SKP56-201ENST00000410513 FAM205CA6NFA0 338 aa9.74□□□□□ -0.85
RN7SKP56-201ENST00000410513 TBC1D12O60347 775 aa9.74□□□□□ -0.85
RN7SKP56-201ENST00000410513 MAP3K9P80192 1104 aa9.74□□□□□ -0.85
RN7SKP56-201ENST00000410513 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
RN7SKP56-201ENST00000410513 EVI5O60447 810 aa9.73□□□□□ -0.85
RN7SKP56-201ENST00000410513 ZNF316A6NFI3 1004 aaPredicted RBP9.72□□□□□ -0.85
RN7SKP56-201ENST00000410513 HS3ST6Q96QI5 342 aa9.72□□□□□ -0.85
RN7SKP56-201ENST00000410513 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
RN7SKP56-201ENST00000410513 VARS2Q5ST30 1063 aaKnown RBP9.71□□□□□ -0.86
RN7SKP56-201ENST00000410513 ERBB3P21860 1342 aa9.71□□□□□ -0.86
RN7SKP56-201ENST00000410513 ANO8Q9HCE9 1232 aaPredicted RBP9.7□□□□□ -0.86
RN7SKP56-201ENST00000410513 PDIA6Q15084 440 aa9.68□□□□□ -0.86
RN7SKP56-201ENST00000410513 ARHGEF1Q92888 912 aaKnown RBP9.66□□□□□ -0.86
RN7SKP56-201ENST00000410513 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
RN7SKP56-201ENST00000410513 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
RN7SKP56-201ENST00000410513 FOSBP53539 338 aa9.63□□□□□ -0.87
RN7SKP56-201ENST00000410513 CDAN1Q8IWY9 1227 aa9.63□□□□□ -0.87
RN7SKP56-201ENST00000410513 SLC24A1O60721 1099 aa9.62□□□□□ -0.87
RN7SKP56-201ENST00000410513 POTEEQ6S8J3 1075 aa9.62□□□□□ -0.87
RN7SKP56-201ENST00000410513 ZNF454Q8N9F8 522 aa9.62□□□□□ -0.87
RN7SKP56-201ENST00000410513 PTGER2P43116 358 aa9.61□□□□□ -0.87
RN7SKP56-201ENST00000410513 ZNF687Q8N1G0 1237 aa9.61□□□□□ -0.87
RN7SKP56-201ENST00000410513 DDX12PQ92771 950 aa9.61□□□□□ -0.87
RN7SKP56-201ENST00000410513 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
RN7SKP56-201ENST00000410513 PCDHGA10Q9Y5H3 936 aa9.61□□□□□ -0.87
RN7SKP56-201ENST00000410513 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
RN7SKP56-201ENST00000410513 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
RN7SKP56-201ENST00000410513 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
RN7SKP56-201ENST00000410513 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
RN7SKP56-201ENST00000410513 SEMA3EO15041 775 aa9.57□□□□□ -0.88
RN7SKP56-201ENST00000410513 MLLT3P42568 568 aaPredicted RBP9.57□□□□□ -0.88
RN7SKP56-201ENST00000410513 PRIM1P49642 420 aaKnown RBP9.57□□□□□ -0.88
RN7SKP56-201ENST00000410513 ADAM33Q9BZ11 813 aa9.57□□□□□ -0.88
RN7SKP56-201ENST00000410513 AXIN2Q9Y2T1 843 aa9.57□□□□□ -0.88
RN7SKP56-201ENST00000410513 PHF14O94880 888 aa9.56□□□□□ -0.88
RN7SKP56-201ENST00000410513 GRXCR2A6NFK2 248 aa9.55□□□□□ -0.88
RN7SKP56-201ENST00000410513 ZDHHC16Q969W1 377 aa9.55□□□□□ -0.88
RN7SKP56-201ENST00000410513 NBR1Q14596 966 aa9.54□□□□□ -0.88
RN7SKP56-201ENST00000410513 TYW1BQ6NUM6 668 aa9.54□□□□□ -0.88
RN7SKP56-201ENST00000410513 PSEN2P49810 448 aa9.53□□□□□ -0.88
RN7SKP56-201ENST00000410513 BCL2L12Q9HB09 334 aa9.53□□□□□ -0.88
RN7SKP56-201ENST00000410513 OSBPP22059 807 aa9.52□□□□□ -0.89
RN7SKP56-201ENST00000410513 RBM33Q96EV2 1170 aaKnown RBP9.52□□□□□ -0.89
RN7SKP56-201ENST00000410513 EPAS1Q99814 870 aa9.52□□□□□ -0.89
RN7SKP56-201ENST00000410513 PCDH10Q9P2E7 1040 aa9.52□□□□□ -0.89
RN7SKP56-201ENST00000410513 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
RN7SKP56-201ENST00000410513 PBX2P40425 430 aa9.51□□□□□ -0.89
RN7SKP56-201ENST00000410513 DMRTA1Q5VZB9 504 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms