RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 DNMT1P26358 1616 aaKnown RBP21.09■□□□□ 0.97
LYSMD4-204ENST00000409796 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
LYSMD4-204ENST00000409796 ROCK1Q13464 1354 aa21.09■□□□□ 0.97
LYSMD4-204ENST00000409796 DISP1Q96F81 1524 aa21.08■□□□□ 0.97
LYSMD4-204ENST00000409796 ABCC5O15440 1437 aa21.08■□□□□ 0.97
LYSMD4-204ENST00000409796 CNTLNQ9NXG0 1405 aa21.08■□□□□ 0.97
LYSMD4-204ENST00000409796 ANKRD30BQ9BXX2 1392 aa21.07■□□□□ 0.96
LYSMD4-204ENST00000409796 NUP153P49790 1475 aaKnown RBP21.06■□□□□ 0.96
LYSMD4-204ENST00000409796 KIAA0586Q9BVV6 1533 aa21.06■□□□□ 0.96
LYSMD4-204ENST00000409796 ZNF644Q9H582 1327 aaPredicted RBP21.06■□□□□ 0.96
LYSMD4-204ENST00000409796 RPRD2Q5VT52 1461 aaKnown RBP21.05■□□□□ 0.96
LYSMD4-204ENST00000409796 C11orf95C9JLR9 678 aaPredicted RBP21.05■□□□□ 0.96
LYSMD4-204ENST00000409796 RAPGEF6Q8TEU7 1601 aa21.04■□□□□ 0.96
LYSMD4-204ENST00000409796 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
LYSMD4-204ENST00000409796 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
LYSMD4-204ENST00000409796 NBPF8Q3BBV2 869 aa21.03■□□□□ 0.96
LYSMD4-204ENST00000409796 CCDC7Q96M83 1385 aa21.03■□□□□ 0.96
LYSMD4-204ENST00000409796 TEX14Q8IWB6 1497 aa21.02■□□□□ 0.96
LYSMD4-204ENST00000409796 CCDC184Q52MB2 194 aa21.01■□□□□ 0.95
LYSMD4-204ENST00000409796 SLC4A1APQ9BWU0 796 aaKnown RBP20.99■□□□□ 0.95
LYSMD4-204ENST00000409796 RBM19Q9Y4C8 960 aaKnown RBP20.99■□□□□ 0.95
LYSMD4-204ENST00000409796 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
LYSMD4-204ENST00000409796 PRKRIP1Q9H875 184 aaPredicted RBP20.96■□□□□ 0.95
LYSMD4-204ENST00000409796 CDK11AQ9UQ88 783 aaPredicted RBP20.96■□□□□ 0.95
LYSMD4-204ENST00000409796 POLR1AO95602 1720 aaPredicted RBP20.95■□□□□ 0.95
LYSMD4-204ENST00000409796 IRX6P78412 446 aaPredicted RBP20.95■□□□□ 0.94
LYSMD4-204ENST00000409796 PRG4Q92954 1404 aaPredicted RBP20.94■□□□□ 0.94
LYSMD4-204ENST00000409796 EIF4G3O43432 1585 aaKnown RBP20.94■□□□□ 0.94
LYSMD4-204ENST00000409796 SPATA31E1Q6ZUB1 1445 aa20.94■□□□□ 0.94
LYSMD4-204ENST00000409796 PZPP20742 1482 aa20.93■□□□□ 0.94
LYSMD4-204ENST00000409796 CAMSAP2Q08AD1 1489 aa20.93■□□□□ 0.94
LYSMD4-204ENST00000409796 TROQ12816 1431 aaPredicted RBP20.93■□□□□ 0.94
LYSMD4-204ENST00000409796 ADGBQ8N7X0 1667 aa20.92■□□□□ 0.94
LYSMD4-204ENST00000409796 KIF7Q2M1P5 1343 aa20.91■□□□□ 0.94
LYSMD4-204ENST00000409796 ITSN2Q9NZM3 1697 aa20.91■□□□□ 0.94
LYSMD4-204ENST00000409796 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
LYSMD4-204ENST00000409796 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
LYSMD4-204ENST00000409796 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.93
LYSMD4-204ENST00000409796 KIF14Q15058 1648 aa20.88■□□□□ 0.93
LYSMD4-204ENST00000409796 GPATCH8Q9UKJ3 1502 aaKnown RBP20.87■□□□□ 0.93
LYSMD4-204ENST00000409796 PLB1Q6P1J6 1458 aa20.87■□□□□ 0.93
LYSMD4-204ENST00000409796 CROCC2H7BZ55 1655 aa20.87■□□□□ 0.93
LYSMD4-204ENST00000409796 ADCY10Q96PN6 1610 aa20.86■□□□□ 0.93
LYSMD4-204ENST00000409796 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
LYSMD4-204ENST00000409796 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
LYSMD4-204ENST00000409796 ADGRL2O95490 1459 aa20.84■□□□□ 0.93
LYSMD4-204ENST00000409796 MBD5Q9P267 1494 aa20.84■□□□□ 0.93
LYSMD4-204ENST00000409796 OSCARQ8IYS5 282 aa20.83■□□□□ 0.93
LYSMD4-204ENST00000409796 KIAA1107Q9UPP5 1409 aa20.83■□□□□ 0.93
LYSMD4-204ENST00000409796 ZBED9Q6R2W3 1325 aa20.82■□□□□ 0.92
LYSMD4-204ENST00000409796 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
LYSMD4-204ENST00000409796 ERICH6BQ5W0A0 696 aa20.81■□□□□ 0.92
LYSMD4-204ENST00000409796 BCORL1Q5H9F3 1711 aa20.8■□□□□ 0.92
LYSMD4-204ENST00000409796 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
LYSMD4-204ENST00000409796 PKD2Q13563 968 aa20.79■□□□□ 0.92
LYSMD4-204ENST00000409796 ANKRD30AQ9BXX3 1397 aa20.78■□□□□ 0.92
LYSMD4-204ENST00000409796 SYNJ2O15056 1496 aa20.78■□□□□ 0.92
LYSMD4-204ENST00000409796 PPP4R2Q9NY27 417 aa20.77■□□□□ 0.92
LYSMD4-204ENST00000409796 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
LYSMD4-204ENST00000409796 USP47Q96K76 1375 aa20.76■□□□□ 0.91
LYSMD4-204ENST00000409796 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
LYSMD4-204ENST00000409796 CDC42BPAQ5VT25 1732 aa20.75■□□□□ 0.91
LYSMD4-204ENST00000409796 ANKRD50Q9ULJ7 1429 aa20.75■□□□□ 0.91
LYSMD4-204ENST00000409796 FBLN2P98095 1184 aa20.74■□□□□ 0.91
LYSMD4-204ENST00000409796 CARMIL2Q6F5E8 1435 aa20.74■□□□□ 0.91
LYSMD4-204ENST00000409796 KDM5CP41229 1560 aa20.74■□□□□ 0.91
LYSMD4-204ENST00000409796 JPH4Q96JJ6 628 aa20.72■□□□□ 0.91
LYSMD4-204ENST00000409796 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
LYSMD4-204ENST00000409796 MSH5O43196 834 aa20.71■□□□□ 0.91
LYSMD4-204ENST00000409796 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
LYSMD4-204ENST00000409796 NUP160Q12769 1436 aa20.7■□□□□ 0.91
LYSMD4-204ENST00000409796 ABCC10Q5T3U5 1492 aa20.69■□□□□ 0.9
LYSMD4-204ENST00000409796 ABCA8O94911 1581 aa20.69■□□□□ 0.9
LYSMD4-204ENST00000409796 PLEKHD1A6NEE1 506 aa20.68■□□□□ 0.9
LYSMD4-204ENST00000409796 C9orf84Q5VXU9 1444 aa20.68■□□□□ 0.9
LYSMD4-204ENST00000409796 NUP155O75694 1391 aa20.68■□□□□ 0.9
LYSMD4-204ENST00000409796 UHRF1BP1Q6BDS2 1440 aa20.67■□□□□ 0.9
LYSMD4-204ENST00000409796 SHANK2Q9UPX8 1470 aa20.67■□□□□ 0.9
LYSMD4-204ENST00000409796 RALGAPBQ86X10 1494 aa20.66■□□□□ 0.9
LYSMD4-204ENST00000409796 FANCIQ9NVI1 1328 aa20.66■□□□□ 0.9
LYSMD4-204ENST00000409796 ATP10BO94823 1461 aa20.66■□□□□ 0.9
LYSMD4-204ENST00000409796 B4GALNT3Q6L9W6 998 aa20.66■□□□□ 0.9
LYSMD4-204ENST00000409796 ARID4BQ4LE39 1312 aaPredicted RBP20.65■□□□□ 0.9
LYSMD4-204ENST00000409796 KDM5DQ9BY66 1539 aa20.63■□□□□ 0.89
LYSMD4-204ENST00000409796 SMG6Q86US8 1419 aaKnown RBP20.63■□□□□ 0.89
LYSMD4-204ENST00000409796 ARHGEF12Q9NZN5 1544 aa20.62■□□□□ 0.89
LYSMD4-204ENST00000409796 CARD11Q9BXL7 1154 aa20.61■□□□□ 0.89
LYSMD4-204ENST00000409796 TSPY4P0CV99 314 aa20.6■□□□□ 0.89
LYSMD4-204ENST00000409796 TSPY10P0CW01 314 aa20.6■□□□□ 0.89
LYSMD4-204ENST00000409796 ROCK2O75116 1388 aaKnown RBP20.59■□□□□ 0.89
LYSMD4-204ENST00000409796 KIF15Q9NS87 1388 aa20.58■□□□□ 0.89
LYSMD4-204ENST00000409796 HNRNPMP52272 730 aaKnown RBP eCLIP20.58■□□□□ 0.89
LYSMD4-204ENST00000409796 KDM2AQ9Y2K7 1162 aa20.58■□□□□ 0.89
LYSMD4-204ENST00000409796 NUDCQ9Y266 331 aa20.58■□□□□ 0.88
LYSMD4-204ENST00000409796 PTPRGP23470 1445 aa20.57■□□□□ 0.88
LYSMD4-204ENST00000409796 ARHGEF5Q12774 1597 aa20.57■□□□□ 0.88
LYSMD4-204ENST00000409796 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
LYSMD4-204ENST00000409796 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
LYSMD4-204ENST00000409796 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
LYSMD4-204ENST00000409796 PNISRQ8TF01 805 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms