RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 EIF3AQ14152 1382 aaKnown RBP6.57□□□□□ -1.36
SCN3A-203ENST00000409101 NEUROD2Q15784 382 aa6.57□□□□□ -1.36
SCN3A-203ENST00000409101 CC2D2AQ9P2K1 1620 aa6.57□□□□□ -1.36
SCN3A-203ENST00000409101 NCAPD3P42695 1498 aa6.56□□□□□ -1.36
SCN3A-203ENST00000409101 OS9Q13438 667 aaPredicted RBP6.55□□□□□ -1.36
SCN3A-203ENST00000409101 FTSJ3Q8IY81 847 aaKnown RBP6.55□□□□□ -1.36
SCN3A-203ENST00000409101 PHF23Q9BUL5 403 aaPredicted RBP6.55□□□□□ -1.36
SCN3A-203ENST00000409101 FGD5Q6ZNL6 1462 aa6.55□□□□□ -1.36
SCN3A-203ENST00000409101 AQRO60306 1485 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCN3A-203ENST00000409101 EVA1CP58658 441 aa6.54□□□□□ -1.36
SCN3A-203ENST00000409101 RAD54L2Q9Y4B4 1467 aa6.54□□□□□ -1.36
SCN3A-203ENST00000409101 CDK11BP21127 795 aaKnown RBP6.54□□□□□ -1.36
SCN3A-203ENST00000409101 ZNF330Q9Y3S2 320 aaPredicted RBP6.54□□□□□ -1.36
SCN3A-203ENST00000409101 CASC1Q6TDU7 716 aa6.54□□□□□ -1.36
SCN3A-203ENST00000409101 IFT140Q96RY7 1462 aa6.53□□□□□ -1.36
SCN3A-203ENST00000409101 SIN3AQ96ST3 1273 aa6.53□□□□□ -1.36
SCN3A-203ENST00000409101 ROCK2O75116 1388 aaKnown RBP6.53□□□□□ -1.36
SCN3A-203ENST00000409101 VPS8Q8N3P4 1428 aa6.53□□□□□ -1.36
SCN3A-203ENST00000409101 SETD5Q9C0A6 1442 aa6.53□□□□□ -1.36
SCN3A-203ENST00000409101 GRIN2BQ13224 1484 aa6.52□□□□□ -1.37
SCN3A-203ENST00000409101 CHMP4BQ9H444 224 aaKnown RBP6.52□□□□□ -1.37
SCN3A-203ENST00000409101 CCDC136Q96JN2 1154 aa6.52□□□□□ -1.37
SCN3A-203ENST00000409101 TERF2IPQ9NYB0 399 aa6.52□□□□□ -1.37
SCN3A-203ENST00000409101 DCAF8L1A6NGE4 600 aa6.52□□□□□ -1.37
SCN3A-203ENST00000409101 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCN3A-203ENST00000409101 UACAQ9BZF9 1416 aa6.51□□□□□ -1.37
SCN3A-203ENST00000409101 FKBP8Q14318 412 aa6.51□□□□□ -1.37
SCN3A-203ENST00000409101 ANP32BQ92688 251 aaKnown RBP6.51□□□□□ -1.37
SCN3A-203ENST00000409101 G3V3G9 751 aa6.51□□□□□ -1.37
SCN3A-203ENST00000409101 ATF3P18847 181 aa6.51□□□□□ -1.37
SCN3A-203ENST00000409101 FOXD1Q16676 465 aa6.51□□□□□ -1.37
SCN3A-203ENST00000409101 DCAF8Q5TAQ9 597 aa6.51□□□□□ -1.37
SCN3A-203ENST00000409101 NUTM2FA1L443 756 aa6.51□□□□□ -1.37
SCN3A-203ENST00000409101 MPHOSPH9Q99550 1183 aa6.51□□□□□ -1.37
SCN3A-203ENST00000409101 MSH5O43196 834 aa6.5□□□□□ -1.37
SCN3A-203ENST00000409101 AMPHP49418 695 aa6.5□□□□□ -1.37
SCN3A-203ENST00000409101 PRG4Q92954 1404 aaPredicted RBP6.5□□□□□ -1.37
SCN3A-203ENST00000409101 KANK4Q5T7N3 995 aaPredicted RBP6.5□□□□□ -1.37
SCN3A-203ENST00000409101 VGFO15240 615 aaPredicted RBP6.49□□□□□ -1.37
SCN3A-203ENST00000409101 GTF3C3Q9Y5Q9 886 aa6.49□□□□□ -1.37
SCN3A-203ENST00000409101 EIF5BO60841 1220 aaKnown RBP6.49□□□□□ -1.37
SCN3A-203ENST00000409101 MS4A1P11836 297 aa6.49□□□□□ -1.37
SCN3A-203ENST00000409101 TULP1O00294 542 aaPredicted RBP6.49□□□□□ -1.37
SCN3A-203ENST00000409101 PRDM2Q13029 1718 aa6.49□□□□□ -1.37
SCN3A-203ENST00000409101 NESP48681 1621 aa6.48□□□□□ -1.37
SCN3A-203ENST00000409101 CALD1Q05682 793 aaKnown RBP6.48□□□□□ -1.37
SCN3A-203ENST00000409101 LTV1Q96GA3 475 aaPredicted RBP6.48□□□□□ -1.37
SCN3A-203ENST00000409101 ISY1Q9ULR0 285 aaKnown RBP6.48□□□□□ -1.37
SCN3A-203ENST00000409101 CHMP4AQ9BY43 222 aa6.48□□□□□ -1.37
SCN3A-203ENST00000409101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.47□□□□□ -1.37
SCN3A-203ENST00000409101 FRAT1Q92837 279 aaPredicted RBP6.47□□□□□ -1.37
SCN3A-203ENST00000409101 PSME1Q06323 249 aa6.47□□□□□ -1.37
SCN3A-203ENST00000409101 POGZQ7Z3K3 1410 aa6.46□□□□□ -1.38
SCN3A-203ENST00000409101 TRAK1Q9UPV9 953 aa6.46□□□□□ -1.38
SCN3A-203ENST00000409101 KTN1Q86UP2 1357 aaKnown RBP6.46□□□□□ -1.38
SCN3A-203ENST00000409101 SENP3-EIF4A1A0A087X0R7 540 aa6.46□□□□□ -1.38
SCN3A-203ENST00000409101 CCDC144AA2RUR9 1427 aa6.46□□□□□ -1.38
SCN3A-203ENST00000409101 GTF2E1P29083 439 aaPredicted RBP6.46□□□□□ -1.38
SCN3A-203ENST00000409101 ARHGAP5Q13017 1502 aa6.45□□□□□ -1.38
SCN3A-203ENST00000409101 SYNJ2O15056 1496 aa6.45□□□□□ -1.38
SCN3A-203ENST00000409101 SNAPC4Q5SXM2 1469 aa6.45□□□□□ -1.38
SCN3A-203ENST00000409101 U2AF1L5P0DN76 240 aaPredicted RBP6.45□□□□□ -1.38
SCN3A-203ENST00000409101 U2AF1Q01081 240 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCN3A-203ENST00000409101 NCLP19338 710 aaKnown RBP6.45□□□□□ -1.38
SCN3A-203ENST00000409101 TIMELESSQ9UNS1 1208 aa6.45□□□□□ -1.38
SCN3A-203ENST00000409101 TAF7LQ5H9L4 462 aa6.45□□□□□ -1.38
SCN3A-203ENST00000409101 C1orf141Q5JVX7 400 aa6.45□□□□□ -1.38
SCN3A-203ENST00000409101 KLHL34Q8N239 644 aa6.45□□□□□ -1.38
SCN3A-203ENST00000409101 TAOK2Q9UL54 1235 aa6.44□□□□□ -1.38
SCN3A-203ENST00000409101 KCNJ4P48050 445 aa6.44□□□□□ -1.38
SCN3A-203ENST00000409101 FGD1P98174 961 aa6.44□□□□□ -1.38
SCN3A-203ENST00000409101 SF3B2Q13435 895 aaKnown RBP6.44□□□□□ -1.38
SCN3A-203ENST00000409101 IGF1RP08069 1367 aa6.44□□□□□ -1.38
SCN3A-203ENST00000409101 COG3Q96JB2 828 aa6.44□□□□□ -1.38
SCN3A-203ENST00000409101 HMGXB3Q12766 1538 aa6.44□□□□□ -1.38
SCN3A-203ENST00000409101 HSPA5P11021 654 aaKnown RBP6.44□□□□□ -1.38
SCN3A-203ENST00000409101 CHMP3Q9Y3E7 222 aa6.43□□□□□ -1.38
SCN3A-203ENST00000409101 STK31Q9BXU1 1019 aa6.43□□□□□ -1.38
SCN3A-203ENST00000409101 NAP1L2Q9ULW6 460 aaPredicted RBP6.43□□□□□ -1.38
SCN3A-203ENST00000409101 EVC2Q86UK5 1308 aa6.43□□□□□ -1.38
SCN3A-203ENST00000409101 DNAJC5BQ9UF47 199 aa6.43□□□□□ -1.38
SCN3A-203ENST00000409101 PROSER2Q86WR7 435 aaPredicted RBP6.43□□□□□ -1.38
SCN3A-203ENST00000409101 ZRSR1Q15695 479 aaKnown RBP6.42□□□□□ -1.38
SCN3A-203ENST00000409101 CFTRP13569 1480 aa6.42□□□□□ -1.38
SCN3A-203ENST00000409101 MINK1Q8N4C8 1332 aaPredicted RBP6.42□□□□□ -1.38
SCN3A-203ENST00000409101 IRX6P78412 446 aaPredicted RBP6.42□□□□□ -1.38
SCN3A-203ENST00000409101 LMOD3Q0VAK6 560 aa6.42□□□□□ -1.38
SCN3A-203ENST00000409101 PIP4K2BP78356 416 aa6.42□□□□□ -1.38
SCN3A-203ENST00000409101 GORABQ5T7V8 394 aa6.42□□□□□ -1.38
SCN3A-203ENST00000409101 SYTL4Q96C24 671 aaPredicted RBP6.42□□□□□ -1.38
SCN3A-203ENST00000409101 RAB3GAP2Q9H2M9 1393 aa6.42□□□□□ -1.38
SCN3A-203ENST00000409101 THEMISQ8N1K5 641 aaPredicted RBP6.41□□□□□ -1.38
SCN3A-203ENST00000409101 IPO8O15397 1037 aaKnown RBP6.41□□□□□ -1.38
SCN3A-203ENST00000409101 BECN1Q14457 450 aa6.41□□□□□ -1.38
SCN3A-203ENST00000409101 TTC5Q8N0Z6 440 aa6.41□□□□□ -1.38
SCN3A-203ENST00000409101 HDAC5Q9UQL6 1122 aa6.41□□□□□ -1.38
SCN3A-203ENST00000409101 TOPBP1Q92547 1522 aa6.41□□□□□ -1.38
SCN3A-203ENST00000409101 TXNDC2Q86VQ3 553 aa6.41□□□□□ -1.38
SCN3A-203ENST00000409101 MYOM3Q5VTT5 1437 aa6.4□□□□□ -1.38
SCN3A-203ENST00000409101 CUX1P39880 1505 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms