RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 MYT1Q01538 1121 aa5.15□□□□□ -1.59
RGPD4-201ENST00000408999 ZBTB47Q9UFB7 747 aaPredicted RBP5.15□□□□□ -1.59
RGPD4-201ENST00000408999 FHAD1B1AJZ9 1412 aa5.15□□□□□ -1.59
RGPD4-201ENST00000408999 CFDP1Q9UEE9 299 aaPredicted RBP5.14□□□□□ -1.59
RGPD4-201ENST00000408999 FAM9BQ8IZU0 186 aa5.13□□□□□ -1.59
RGPD4-201ENST00000408999 WASHC2CQ9Y4E1 1318 aa5.13□□□□□ -1.59
RGPD4-201ENST00000408999 RTL5Q5HYW3 569 aaPredicted RBP5.13□□□□□ -1.59
RGPD4-201ENST00000408999 CCNB3Q8WWL7 1395 aa5.13□□□□□ -1.59
RGPD4-201ENST00000408999 SENP3Q9H4L4 574 aaPredicted RBP5.12□□□□□ -1.59
RGPD4-201ENST00000408999 HIRIP3Q9BW71 556 aaPredicted RBP5.12□□□□□ -1.59
RGPD4-201ENST00000408999 KDM6BO15054 1643 aa5.12□□□□□ -1.59
RGPD4-201ENST00000408999 ARHGAP35Q9NRY4 1499 aa5.12□□□□□ -1.59
RGPD4-201ENST00000408999 HNRNPUQ00839 825 aaKnown RBP eCLIP5.12□□□□□ -1.59
RGPD4-201ENST00000408999 BRPF3Q9ULD4 1205 aa5.12□□□□□ -1.59
RGPD4-201ENST00000408999 ATMQ13315 3056 aa5.11□□□□□ -1.59
RGPD4-201ENST00000408999 CADPSQ9ULU8 1353 aa5.11□□□□□ -1.59
RGPD4-201ENST00000408999 BCORL1Q5H9F3 1711 aa5.11□□□□□ -1.59
RGPD4-201ENST00000408999 VPS8Q8N3P4 1428 aa5.11□□□□□ -1.59
RGPD4-201ENST00000408999 PEG3Q9GZU2 1588 aa5.11□□□□□ -1.59
RGPD4-201ENST00000408999 ERBB4Q15303 1308 aa5.11□□□□□ -1.59
RGPD4-201ENST00000408999 NLRP1Q9C000 1473 aa5.1□□□□□ -1.59
RGPD4-201ENST00000408999 TDRD9Q8NDG6 1382 aaKnown RBP5.1□□□□□ -1.59
RGPD4-201ENST00000408999 EIF4G2P78344 907 aaKnown RBP eCLIP5.1□□□□□ -1.59
RGPD4-201ENST00000408999 FKBP8Q14318 412 aa5.1□□□□□ -1.59
RGPD4-201ENST00000408999 WDR43Q15061 677 aaKnown RBP eCLIP5.1□□□□□ -1.59
RGPD4-201ENST00000408999 FANCD2Q9BXW9 1451 aa5.09□□□□□ -1.59
RGPD4-201ENST00000408999 RAPGEF2Q9Y4G8 1499 aa5.09□□□□□ -1.59
RGPD4-201ENST00000408999 RRAGDQ9NQL2 400 aaPredicted RBP5.09□□□□□ -1.59
RGPD4-201ENST00000408999 TMC1Q8TDI8 760 aa5.09□□□□□ -1.59
RGPD4-201ENST00000408999 USP19O94966 1318 aa5.09□□□□□ -1.59
RGPD4-201ENST00000408999 ARID4BQ4LE39 1312 aaPredicted RBP5.09□□□□□ -1.59
RGPD4-201ENST00000408999 CARMIL2Q6F5E8 1435 aa5.09□□□□□ -1.59
RGPD4-201ENST00000408999 RGL3Q3MIN7 710 aa5.09□□□□□ -1.6
RGPD4-201ENST00000408999 MRS2Q9HD23 443 aa5.08□□□□□ -1.6
RGPD4-201ENST00000408999 MYOM3Q5VTT5 1437 aa5.08□□□□□ -1.6
RGPD4-201ENST00000408999 RTN4Q9NQC3 1192 aaKnown RBP5.08□□□□□ -1.6
RGPD4-201ENST00000408999 PTPRKQ15262 1439 aa5.08□□□□□ -1.6
RGPD4-201ENST00000408999 FMN1Q68DA7 1419 aa5.07□□□□□ -1.6
RGPD4-201ENST00000408999 KANK4Q5T7N3 995 aaPredicted RBP5.07□□□□□ -1.6
RGPD4-201ENST00000408999 AK9Q5TCS8 1911 aa5.07□□□□□ -1.6
RGPD4-201ENST00000408999 FHOD3Q2V2M9 1422 aa5.07□□□□□ -1.6
RGPD4-201ENST00000408999 NPM2Q86SE8 214 aaKnown RBP5.06□□□□□ -1.6
RGPD4-201ENST00000408999 SETD5Q9C0A6 1442 aa5.06□□□□□ -1.6
RGPD4-201ENST00000408999 ZBTB7CA1YPR0 619 aa5.06□□□□□ -1.6
RGPD4-201ENST00000408999 DEKP35659 375 aaKnown RBP5.06□□□□□ -1.6
RGPD4-201ENST00000408999 CARD11Q9BXL7 1154 aa5.06□□□□□ -1.6
RGPD4-201ENST00000408999 RNF123Q5XPI4 1314 aa5.06□□□□□ -1.6
RGPD4-201ENST00000408999 KANK1Q14678 1352 aa5.06□□□□□ -1.6
RGPD4-201ENST00000408999 ANP32AP39687 249 aaKnown RBP5.05□□□□□ -1.6
RGPD4-201ENST00000408999 FGD5Q6ZNL6 1462 aa5.04□□□□□ -1.6
RGPD4-201ENST00000408999 C14orf37Q86TY3 774 aa5.04□□□□□ -1.6
RGPD4-201ENST00000408999 TIMELESSQ9UNS1 1208 aa5.04□□□□□ -1.6
RGPD4-201ENST00000408999 JARID2Q92833 1246 aaPredicted RBP5.04□□□□□ -1.6
RGPD4-201ENST00000408999 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.03□□□□□ -1.6
RGPD4-201ENST00000408999 CUBNO60494 3623 aa5.03□□□□□ -1.6
RGPD4-201ENST00000408999 FANCIQ9NVI1 1328 aa5.03□□□□□ -1.6
RGPD4-201ENST00000408999 IRX6P78412 446 aaPredicted RBP5.03□□□□□ -1.6
RGPD4-201ENST00000408999 HMGXB3Q12766 1538 aa5.03□□□□□ -1.6
RGPD4-201ENST00000408999 UNC13AQ9UPW8 1703 aa5.03□□□□□ -1.6
RGPD4-201ENST00000408999 CDCA8Q53HL2 280 aa5.03□□□□□ -1.6
RGPD4-201ENST00000408999 KNSTRNQ9Y448 316 aa5.02□□□□□ -1.61
RGPD4-201ENST00000408999 RAD54L2Q9Y4B4 1467 aa5.02□□□□□ -1.61
RGPD4-201ENST00000408999 CCDC18Q5T9S5 1454 aa5.02□□□□□ -1.61
RGPD4-201ENST00000408999 ARAP1Q96P48 1450 aa5.02□□□□□ -1.61
RGPD4-201ENST00000408999 SYNJ1O43426 1573 aa5.02□□□□□ -1.61
RGPD4-201ENST00000408999 RAB3GAP2Q9H2M9 1393 aa5.02□□□□□ -1.61
RGPD4-201ENST00000408999 ZMYND15Q9H091 742 aa5.02□□□□□ -1.61
RGPD4-201ENST00000408999 CC2D2AQ9P2K1 1620 aa5.01□□□□□ -1.61
RGPD4-201ENST00000408999 TCHHQ07283 1943 aa5.01□□□□□ -1.61
RGPD4-201ENST00000408999 GAPVD1Q14C86 1478 aa5.01□□□□□ -1.61
RGPD4-201ENST00000408999 POGKQ9P215 609 aa5□□□□□ -1.61
RGPD4-201ENST00000408999 ANKRD30AQ9BXX3 1397 aa5□□□□□ -1.61
RGPD4-201ENST00000408999 AKNAQ7Z591 1439 aa5□□□□□ -1.61
RGPD4-201ENST00000408999 SENP3-EIF4A1A0A087X0R7 540 aa5□□□□□ -1.61
RGPD4-201ENST00000408999 TRHP20396 242 aaPredicted RBP5□□□□□ -1.61
RGPD4-201ENST00000408999 MLECQ14165 292 aa5□□□□□ -1.61
RGPD4-201ENST00000408999 CFAP53Q96M91 514 aa5□□□□□ -1.61
RGPD4-201ENST00000408999 CC2D1BQ5T0F9 858 aaKnown RBP5□□□□□ -1.61
RGPD4-201ENST00000408999 VIRMAQ69YN4 1812 aaKnown RBP5□□□□□ -1.61
RGPD4-201ENST00000408999 PRDM2Q13029 1718 aa5□□□□□ -1.61
RGPD4-201ENST00000408999 RTEL1-TNFRSF6BF6WH68 1400 aa5□□□□□ -1.61
RGPD4-201ENST00000408999 PKD2Q13563 968 aa5□□□□□ -1.61
RGPD4-201ENST00000408999 UPF2Q9HAU5 1272 aaKnown RBP5□□□□□ -1.61
RGPD4-201ENST00000408999 PPM1GO15355 546 aaPredicted RBP4.99□□□□□ -1.61
RGPD4-201ENST00000408999 AAMPQ13685 434 aa4.99□□□□□ -1.61
RGPD4-201ENST00000408999 A0A0G2JS52 829 aa4.98□□□□□ -1.61
RGPD4-201ENST00000408999 HNRNPMP52272 730 aaKnown RBP eCLIP4.98□□□□□ -1.61
RGPD4-201ENST00000408999 KIF21BO75037 1637 aa4.98□□□□□ -1.61
RGPD4-201ENST00000408999 TMF1P82094 1093 aa4.98□□□□□ -1.61
RGPD4-201ENST00000408999 MPHOSPH9Q99550 1183 aa4.98□□□□□ -1.61
RGPD4-201ENST00000408999 MYH16Q9H6N6 1097 aa4.98□□□□□ -1.61
RGPD4-201ENST00000408999 LAMA5O15230 3695 aa4.98□□□□□ -1.61
RGPD4-201ENST00000408999 SPATA31E1Q6ZUB1 1445 aa4.98□□□□□ -1.61
RGPD4-201ENST00000408999 HSPA5P11021 654 aaKnown RBP4.98□□□□□ -1.61
RGPD4-201ENST00000408999 ROCK2O75116 1388 aaKnown RBP4.98□□□□□ -1.61
RGPD4-201ENST00000408999 NUP155O75694 1391 aa4.98□□□□□ -1.61
RGPD4-201ENST00000408999 HSP90AA1P07900 732 aaKnown RBP4.98□□□□□ -1.61
RGPD4-201ENST00000408999 TNNT2P45379 298 aaPredicted RBP4.98□□□□□ -1.61
RGPD4-201ENST00000408999 GGT6Q6P531 493 aa4.98□□□□□ -1.61
RGPD4-201ENST00000408999 HAP1P54257 671 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms