RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 PKD2Q13563 968 aa21.22■□□□□ 0.99
CBX6-202ENST00000407418 FRAT1Q92837 279 aaPredicted RBP21.22■□□□□ 0.99
CBX6-202ENST00000407418 RSPH4AQ5TD94 716 aa21.21■□□□□ 0.99
CBX6-202ENST00000407418 ISY1Q9ULR0 285 aaKnown RBP21.21■□□□□ 0.99
CBX6-202ENST00000407418 ZNF330Q9Y3S2 320 aaPredicted RBP21.2■□□□□ 0.98
CBX6-202ENST00000407418 CHMP4AQ9BY43 222 aa21.2■□□□□ 0.98
CBX6-202ENST00000407418 IRX6P78412 446 aaPredicted RBP21.18■□□□□ 0.98
CBX6-202ENST00000407418 CALD1Q05682 793 aaKnown RBP21.18■□□□□ 0.98
CBX6-202ENST00000407418 NGDNQ8NEJ9 315 aaKnown RBP21.18■□□□□ 0.98
CBX6-202ENST00000407418 NAP1L2Q9ULW6 460 aaPredicted RBP21.17■□□□□ 0.98
CBX6-202ENST00000407418 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
CBX6-202ENST00000407418 TAOK2Q9UL54 1235 aa21.17■□□□□ 0.98
CBX6-202ENST00000407418 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
CBX6-202ENST00000407418 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
CBX6-202ENST00000407418 MEX3CQ5U5Q3 659 aaKnown RBP21.16■□□□□ 0.98
CBX6-202ENST00000407418 NUP155O75694 1391 aa21.16■□□□□ 0.98
CBX6-202ENST00000407418 SIN3AQ96ST3 1273 aa21.15■□□□□ 0.98
CBX6-202ENST00000407418 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
CBX6-202ENST00000407418 G3V3G9 751 aa21.15■□□□□ 0.98
CBX6-202ENST00000407418 DCAF8Q5TAQ9 597 aa21.15■□□□□ 0.98
CBX6-202ENST00000407418 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
CBX6-202ENST00000407418 ROCK2O75116 1388 aaKnown RBP21.12■□□□□ 0.97
CBX6-202ENST00000407418 HNRNPMP52272 730 aaKnown RBP eCLIP21.12■□□□□ 0.97
CBX6-202ENST00000407418 TERF2IPQ9NYB0 399 aa21.12■□□□□ 0.97
CBX6-202ENST00000407418 ANP32EQ9BTT0 268 aa21.11■□□□□ 0.97
CBX6-202ENST00000407418 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
CBX6-202ENST00000407418 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
CBX6-202ENST00000407418 TRIM44Q96DX7 344 aaPredicted RBP21.09■□□□□ 0.97
CBX6-202ENST00000407418 SENP3-EIF4A1A0A087X0R7 540 aa21.08■□□□□ 0.96
CBX6-202ENST00000407418 CLSTN1O94985 981 aa21.07■□□□□ 0.96
CBX6-202ENST00000407418 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
CBX6-202ENST00000407418 PTPRGP23470 1445 aa21.06■□□□□ 0.96
CBX6-202ENST00000407418 KTN1Q86UP2 1357 aaKnown RBP21.06■□□□□ 0.96
CBX6-202ENST00000407418 MIER1Q8N108 512 aa21.05■□□□□ 0.96
CBX6-202ENST00000407418 MCCP23508 829 aa21.05■□□□□ 0.96
CBX6-202ENST00000407418 EVA1CP58658 441 aa21.04■□□□□ 0.96
CBX6-202ENST00000407418 AMPHP49418 695 aa21.04■□□□□ 0.96
CBX6-202ENST00000407418 TIMELESSQ9UNS1 1208 aa21.04■□□□□ 0.96
CBX6-202ENST00000407418 CFAP44Q96MT7 982 aa21.03■□□□□ 0.96
CBX6-202ENST00000407418 TAF7LQ5H9L4 462 aa21.03■□□□□ 0.96
CBX6-202ENST00000407418 NUTM2DQ5VT03 806 aaPredicted RBP21.02■□□□□ 0.96
CBX6-202ENST00000407418 IPO8O15397 1037 aaKnown RBP21.02■□□□□ 0.95
CBX6-202ENST00000407418 TPRNQ4KMQ1 711 aa21.02■□□□□ 0.95
CBX6-202ENST00000407418 VPS8Q8N3P4 1428 aa21.01■□□□□ 0.95
CBX6-202ENST00000407418 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
CBX6-202ENST00000407418 UACAQ9BZF9 1416 aa21■□□□□ 0.95
CBX6-202ENST00000407418 GOLGA6L6A8MZA4 724 aa20.99■□□□□ 0.95
CBX6-202ENST00000407418 FAM69CQ0P6D2 419 aa20.99■□□□□ 0.95
CBX6-202ENST00000407418 STK31Q9BXU1 1019 aa20.99■□□□□ 0.95
CBX6-202ENST00000407418 U2AF1L5P0DN76 240 aaPredicted RBP20.99■□□□□ 0.95
CBX6-202ENST00000407418 U2AF1Q01081 240 aaKnown RBP eCLIP20.99■□□□□ 0.95
CBX6-202ENST00000407418 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
CBX6-202ENST00000407418 GTF2E1P29083 439 aaPredicted RBP20.98■□□□□ 0.95
CBX6-202ENST00000407418 MPHOSPH9Q99550 1183 aa20.98■□□□□ 0.95
CBX6-202ENST00000407418 GORABQ5T7V8 394 aa20.97■□□□□ 0.95
CBX6-202ENST00000407418 CHMP3Q9Y3E7 222 aa20.96■□□□□ 0.95
CBX6-202ENST00000407418 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
CBX6-202ENST00000407418 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.94
CBX6-202ENST00000407418 MSH5O43196 834 aa20.95■□□□□ 0.94
CBX6-202ENST00000407418 PTMAP06454 111 aaKnown RBP20.95■□□□□ 0.94
CBX6-202ENST00000407418 HSP90AB1P08238 724 aaKnown RBP20.95■□□□□ 0.94
CBX6-202ENST00000407418 GNL2Q13823 731 aaKnown RBP20.94■□□□□ 0.94
CBX6-202ENST00000407418 FOXD1Q16676 465 aa20.94■□□□□ 0.94
CBX6-202ENST00000407418 WIZO95785 1651 aa20.93■□□□□ 0.94
CBX6-202ENST00000407418 LMOD3Q0VAK6 560 aa20.92■□□□□ 0.94
CBX6-202ENST00000407418 LTV1Q96GA3 475 aaPredicted RBP20.92■□□□□ 0.94
CBX6-202ENST00000407418 RGS3P49796 1198 aa20.92■□□□□ 0.94
CBX6-202ENST00000407418 DCAF8L1A6NGE4 600 aa20.92■□□□□ 0.94
CBX6-202ENST00000407418 NUTM2FA1L443 756 aa20.9■□□□□ 0.94
CBX6-202ENST00000407418 HSPA5P11021 654 aaKnown RBP20.9■□□□□ 0.94
CBX6-202ENST00000407418 KIAA1211Q6ZU35 1233 aa20.9■□□□□ 0.94
CBX6-202ENST00000407418 GPATCH3Q96I76 525 aa20.9■□□□□ 0.94
CBX6-202ENST00000407418 GOLGA6L4A6NEF3 574 aa20.9■□□□□ 0.94
CBX6-202ENST00000407418 VGFO15240 615 aaPredicted RBP20.89■□□□□ 0.93
CBX6-202ENST00000407418 NAP1L5Q96NT1 182 aaPredicted RBP20.89■□□□□ 0.93
CBX6-202ENST00000407418 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
CBX6-202ENST00000407418 SMARCA4P51532 1647 aa20.88■□□□□ 0.93
CBX6-202ENST00000407418 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.88■□□□□ 0.93
CBX6-202ENST00000407418 C1orf141Q5JVX7 400 aa20.87■□□□□ 0.93
CBX6-202ENST00000407418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.87■□□□□ 0.93
CBX6-202ENST00000407418 RALBP1Q15311 655 aa20.86■□□□□ 0.93
CBX6-202ENST00000407418 RTN4Q9NQC3 1192 aaKnown RBP20.86■□□□□ 0.93
CBX6-202ENST00000407418 SUPT16HQ9Y5B9 1047 aaKnown RBP20.84■□□□□ 0.93
CBX6-202ENST00000407418 FRAT2O75474 233 aaPredicted RBP20.84■□□□□ 0.93
CBX6-202ENST00000407418 DNTTIP2Q5QJE6 756 aaKnown RBP20.84■□□□□ 0.93
CBX6-202ENST00000407418 NRDCO43847 1150 aa20.84■□□□□ 0.93
CBX6-202ENST00000407418 ATF3P18847 181 aa20.83■□□□□ 0.93
CBX6-202ENST00000407418 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
CBX6-202ENST00000407418 TRAK1Q9UPV9 953 aa20.82■□□□□ 0.92
CBX6-202ENST00000407418 ERICH6BQ5W0A0 696 aa20.81■□□□□ 0.92
CBX6-202ENST00000407418 COG3Q96JB2 828 aa20.81■□□□□ 0.92
CBX6-202ENST00000407418 APBB1O00213 710 aa20.81■□□□□ 0.92
CBX6-202ENST00000407418 CCDC144AA2RUR9 1427 aa20.81■□□□□ 0.92
CBX6-202ENST00000407418 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
CBX6-202ENST00000407418 HSCBQ8IWL3 235 aa20.8■□□□□ 0.92
CBX6-202ENST00000407418 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
CBX6-202ENST00000407418 ITPRIPQ8IWB1 547 aa20.79■□□□□ 0.92
CBX6-202ENST00000407418 PSME1Q06323 249 aa20.79■□□□□ 0.92
CBX6-202ENST00000407418 EVC2Q86UK5 1308 aa20.77■□□□□ 0.92
CBX6-202ENST00000407418 HMMRO75330 724 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms