RNA–Protein interactions for RNA: ENST00000404666.6

VSNL1-202, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene VSNL1, Length 992 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-202ENST00000404666 MTUS2Q5JR59 1369 aa18.34■□□□□ 0.53
VSNL1-202ENST00000404666 ARHGAP5Q13017 1502 aa18.33■□□□□ 0.53
VSNL1-202ENST00000404666 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.53
VSNL1-202ENST00000404666 ADGRL1O94910 1474 aa18.33■□□□□ 0.52
VSNL1-202ENST00000404666 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
VSNL1-202ENST00000404666 GPATCH8Q9UKJ3 1502 aaKnown RBP18.32■□□□□ 0.52
VSNL1-202ENST00000404666 ITSN2Q9NZM3 1697 aa18.31■□□□□ 0.52
VSNL1-202ENST00000404666 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
VSNL1-202ENST00000404666 LRRC9Q6ZRR7 1453 aa18.3■□□□□ 0.52
VSNL1-202ENST00000404666 POGZQ7Z3K3 1410 aa18.3■□□□□ 0.52
VSNL1-202ENST00000404666 ABCC1P33527 1531 aa18.29■□□□□ 0.52
VSNL1-202ENST00000404666 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
VSNL1-202ENST00000404666 KDM5CP41229 1560 aa18.28■□□□□ 0.52
VSNL1-202ENST00000404666 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
VSNL1-202ENST00000404666 SCAPERQ9BY12 1400 aa18.27■□□□□ 0.52
VSNL1-202ENST00000404666 SAMD9LQ8IVG5 1584 aa18.26■□□□□ 0.51
VSNL1-202ENST00000404666 RAPGEF3O95398 923 aa18.26■□□□□ 0.51
VSNL1-202ENST00000404666 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
VSNL1-202ENST00000404666 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
VSNL1-202ENST00000404666 CCNB3Q8WWL7 1395 aa18.24■□□□□ 0.51
VSNL1-202ENST00000404666 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
VSNL1-202ENST00000404666 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
VSNL1-202ENST00000404666 KIAA1107Q9UPP5 1409 aa18.22■□□□□ 0.51
VSNL1-202ENST00000404666 ZFYVE16Q7Z3T8 1539 aa18.2■□□□□ 0.5
VSNL1-202ENST00000404666 HECW2Q9P2P5 1572 aa18.2■□□□□ 0.5
VSNL1-202ENST00000404666 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
VSNL1-202ENST00000404666 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
VSNL1-202ENST00000404666 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
VSNL1-202ENST00000404666 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
VSNL1-202ENST00000404666 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
VSNL1-202ENST00000404666 REREQ9P2R6 1566 aa18.16■□□□□ 0.5
VSNL1-202ENST00000404666 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
VSNL1-202ENST00000404666 KIDINS220Q9ULH0 1771 aa18.14■□□□□ 0.5
VSNL1-202ENST00000404666 SIGLEC1Q9BZZ2 1709 aa18.14■□□□□ 0.49
VSNL1-202ENST00000404666 MBD5Q9P267 1494 aa18.14■□□□□ 0.49
VSNL1-202ENST00000404666 INO80Q9ULG1 1556 aaPredicted RBP18.13■□□□□ 0.49
VSNL1-202ENST00000404666 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
VSNL1-202ENST00000404666 KDM4FA0A1W2PPD8 638 aa18.12■□□□□ 0.49
VSNL1-202ENST00000404666 MYOM3Q5VTT5 1437 aa18.12■□□□□ 0.49
VSNL1-202ENST00000404666 MIA2Q96PC5 1412 aa18.12■□□□□ 0.49
VSNL1-202ENST00000404666 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
VSNL1-202ENST00000404666 ADAMTSL3P82987 1691 aa18.12■□□□□ 0.49
VSNL1-202ENST00000404666 BCORL1Q5H9F3 1711 aa18.12■□□□□ 0.49
VSNL1-202ENST00000404666 APLP2Q06481 763 aa18.11■□□□□ 0.49
VSNL1-202ENST00000404666 AFAP1Q8N556 730 aa18.11■□□□□ 0.49
VSNL1-202ENST00000404666 ATP10AO60312 1499 aa18.11■□□□□ 0.49
VSNL1-202ENST00000404666 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
VSNL1-202ENST00000404666 ARHGEF5Q12774 1597 aa18.11■□□□□ 0.49
VSNL1-202ENST00000404666 C9orf84Q5VXU9 1444 aa18.09■□□□□ 0.49
VSNL1-202ENST00000404666 ZNF777Q9ULD5 760 aaPredicted RBP18.08■□□□□ 0.48
VSNL1-202ENST00000404666 ATP7AQ04656 1500 aa18.08■□□□□ 0.48
VSNL1-202ENST00000404666 AGLP35573 1532 aa18.06■□□□□ 0.48
VSNL1-202ENST00000404666 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
VSNL1-202ENST00000404666 CCDC141Q6ZP82 1450 aa18.05■□□□□ 0.48
VSNL1-202ENST00000404666 RTEL1-TNFRSF6BF6WH68 1400 aa18.05■□□□□ 0.48
VSNL1-202ENST00000404666 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.487e-6■■□□□ 11.4
VSNL1-202ENST00000404666 RSPH4AQ5TD94 716 aa18.04■□□□□ 0.48
VSNL1-202ENST00000404666 PLXNC1O60486 1568 aa18.04■□□□□ 0.48
VSNL1-202ENST00000404666 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
VSNL1-202ENST00000404666 TCOF1Q13428 1488 aaKnown RBP18.02■□□□□ 0.48
VSNL1-202ENST00000404666 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
VSNL1-202ENST00000404666 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
VSNL1-202ENST00000404666 SPAG9O60271 1321 aaKnown RBP18.01■□□□□ 0.47
VSNL1-202ENST00000404666 MADDQ8WXG6 1647 aa18.01■□□□□ 0.47
VSNL1-202ENST00000404666 FGD6Q6ZV73 1430 aa18■□□□□ 0.47
VSNL1-202ENST00000404666 CROCC2H7BZ55 1655 aa17.99■□□□□ 0.47
VSNL1-202ENST00000404666 FER1L4A9Z1Z3 1794 aa17.98■□□□□ 0.47
VSNL1-202ENST00000404666 AEBP2Q6ZN18 517 aaPredicted RBP17.97■□□□□ 0.47
VSNL1-202ENST00000404666 DNMT1P26358 1616 aaKnown RBP17.96■□□□□ 0.47
VSNL1-202ENST00000404666 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
VSNL1-202ENST00000404666 ARID4BQ4LE39 1312 aaPredicted RBP17.95■□□□□ 0.46
VSNL1-202ENST00000404666 A2MP01023 1474 aa17.95■□□□□ 0.46
VSNL1-202ENST00000404666 RIMS1Q86UR5 1692 aaKnown RBP17.94■□□□□ 0.46
VSNL1-202ENST00000404666 PTPRMP28827 1452 aa17.94■□□□□ 0.46
VSNL1-202ENST00000404666 MYT1LQ9UL68 1186 aa17.91■□□□□ 0.46
VSNL1-202ENST00000404666 ABCC5O15440 1437 aa17.89■□□□□ 0.46
VSNL1-202ENST00000404666 DHX29Q7Z478 1369 aaKnown RBP17.89■□□□□ 0.45
VSNL1-202ENST00000404666 DAPK1P53355 1430 aa17.89■□□□□ 0.45
VSNL1-202ENST00000404666 MROH2AA6NES4 1674 aa17.88■□□□□ 0.45
VSNL1-202ENST00000404666 TSPY4P0CV99 314 aa17.88■□□□□ 0.45
VSNL1-202ENST00000404666 TSPY10P0CW01 314 aa17.88■□□□□ 0.45
VSNL1-202ENST00000404666 EIF2AK4Q9P2K8 1649 aaKnown RBP17.87■□□□□ 0.45
VSNL1-202ENST00000404666 FAM135AQ9P2D6 1515 aa17.87■□□□□ 0.45
VSNL1-202ENST00000404666 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.85■□□□□ 0.45
VSNL1-202ENST00000404666 RNF17Q9BXT8 1623 aaKnown RBP17.84■□□□□ 0.45
VSNL1-202ENST00000404666 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
VSNL1-202ENST00000404666 DUOX2Q9NRD8 1548 aa17.83■□□□□ 0.45
VSNL1-202ENST00000404666 ADGRL2O95490 1459 aa17.83■□□□□ 0.45
VSNL1-202ENST00000404666 C3P01024 1663 aa17.83■□□□□ 0.44
VSNL1-202ENST00000404666 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
VSNL1-202ENST00000404666 SETD1BQ9UPS6 1966 aaKnown RBP17.82■□□□□ 0.44
VSNL1-202ENST00000404666 MLECQ14165 292 aa17.81■□□□□ 0.44
VSNL1-202ENST00000404666 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
VSNL1-202ENST00000404666 CLTCQ00610 1675 aaKnown RBP17.79■□□□□ 0.44
VSNL1-202ENST00000404666 ERBINQ96RT1 1412 aa17.79■□□□□ 0.44
VSNL1-202ENST00000404666 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
VSNL1-202ENST00000404666 DEPDC5O75140 1603 aa17.77■□□□□ 0.44
VSNL1-202ENST00000404666 MROH1Q8NDA8 1641 aa17.77■□□□□ 0.44
VSNL1-202ENST00000404666 KIF15Q9NS87 1388 aa17.77■□□□□ 0.43
VSNL1-202ENST00000404666 ZC3H13Q5T200 1668 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms