RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
CEACAM1-208ENST00000403461 CADPSQ9ULU8 1353 aa12.89□□□□□ -0.35
CEACAM1-208ENST00000403461 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
CEACAM1-208ENST00000403461 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
CEACAM1-208ENST00000403461 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
CEACAM1-208ENST00000403461 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
CEACAM1-208ENST00000403461 PAXIP1Q6ZW49 1069 aaPredicted RBP12.83□□□□□ -0.36
CEACAM1-208ENST00000403461 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
CEACAM1-208ENST00000403461 IRX5P78411 483 aaPredicted RBP12.82□□□□□ -0.36
CEACAM1-208ENST00000403461 SLAIN1Q8ND83 568 aa12.81□□□□□ -0.36
CEACAM1-208ENST00000403461 LCE2DQ5TA82 110 aaPredicted RBP12.8□□□□□ -0.36
CEACAM1-208ENST00000403461 CFAP44Q96MT7 982 aa12.8□□□□□ -0.36
CEACAM1-208ENST00000403461 OCEL1Q9H607 264 aa12.8□□□□□ -0.36
CEACAM1-208ENST00000403461 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
CEACAM1-208ENST00000403461 CABP2Q9NPB3 220 aa12.78□□□□□ -0.36
CEACAM1-208ENST00000403461 WDR62O43379 1518 aa12.78□□□□□ -0.36
CEACAM1-208ENST00000403461 GOLGA2Q08379 1002 aa12.77□□□□□ -0.37
CEACAM1-208ENST00000403461 CEP164Q9UPV0 1460 aa12.77□□□□□ -0.37
CEACAM1-208ENST00000403461 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
CEACAM1-208ENST00000403461 RYDENQ9NUL5 291 aaKnown RBP12.75□□□□□ -0.37
CEACAM1-208ENST00000403461 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
CEACAM1-208ENST00000403461 EFCAB3Q8N7B9 438 aa12.74□□□□□ -0.37
CEACAM1-208ENST00000403461 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
CEACAM1-208ENST00000403461 SOX12O15370 315 aa12.72□□□□□ -0.37
CEACAM1-208ENST00000403461 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
CEACAM1-208ENST00000403461 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
CEACAM1-208ENST00000403461 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
CEACAM1-208ENST00000403461 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
CEACAM1-208ENST00000403461 CFTRP13569 1480 aa12.67□□□□□ -0.38
CEACAM1-208ENST00000403461 WIZO95785 1651 aa12.67□□□□□ -0.38
CEACAM1-208ENST00000403461 NLRP6P59044 892 aa12.66□□□□□ -0.38
CEACAM1-208ENST00000403461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.39
CEACAM1-208ENST00000403461 ST18O60284 1047 aa12.63□□□□□ -0.39
CEACAM1-208ENST00000403461 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
CEACAM1-208ENST00000403461 FBXO22Q8NEZ5 403 aa12.63□□□□□ -0.39
CEACAM1-208ENST00000403461 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
CEACAM1-208ENST00000403461 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
CEACAM1-208ENST00000403461 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
CEACAM1-208ENST00000403461 RSF1Q96T23 1441 aaPredicted RBP12.6□□□□□ -0.39
CEACAM1-208ENST00000403461 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
CEACAM1-208ENST00000403461 TOP2AP11388 1531 aaKnown RBP12.58□□□□□ -0.4
CEACAM1-208ENST00000403461 SNPHO15079 494 aa12.58□□□□□ -0.4
CEACAM1-208ENST00000403461 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
CEACAM1-208ENST00000403461 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
CEACAM1-208ENST00000403461 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
CEACAM1-208ENST00000403461 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
CEACAM1-208ENST00000403461 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
CEACAM1-208ENST00000403461 IFT140Q96RY7 1462 aa12.53□□□□□ -0.4
CEACAM1-208ENST00000403461 PPP1R37O75864 691 aa12.52□□□□□ -0.41
CEACAM1-208ENST00000403461 G3V3G9 751 aa12.5□□□□□ -0.41
CEACAM1-208ENST00000403461 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
CEACAM1-208ENST00000403461 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
CEACAM1-208ENST00000403461 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
CEACAM1-208ENST00000403461 MARVELD3Q96A59 401 aa12.46□□□□□ -0.41
CEACAM1-208ENST00000403461 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
CEACAM1-208ENST00000403461 KDM2AQ9Y2K7 1162 aa12.45□□□□□ -0.42
CEACAM1-208ENST00000403461 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
CEACAM1-208ENST00000403461 ARHGEF11O15085 1522 aa12.43□□□□□ -0.42
CEACAM1-208ENST00000403461 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
CEACAM1-208ENST00000403461 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
CEACAM1-208ENST00000403461 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
CEACAM1-208ENST00000403461 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
CEACAM1-208ENST00000403461 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
CEACAM1-208ENST00000403461 CYB5RLQ6IPT4 315 aa12.41□□□□□ -0.42
CEACAM1-208ENST00000403461 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
CEACAM1-208ENST00000403461 EMP3P54852 163 aa12.38□□□□□ -0.43
CEACAM1-208ENST00000403461 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
CEACAM1-208ENST00000403461 EIF4G3O43432 1585 aaKnown RBP12.36□□□□□ -0.43
CEACAM1-208ENST00000403461 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.438e-7■■□□□ 12.2
CEACAM1-208ENST00000403461 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
CEACAM1-208ENST00000403461 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
CEACAM1-208ENST00000403461 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
CEACAM1-208ENST00000403461 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
CEACAM1-208ENST00000403461 SOGA1O94964 1423 aa12.28□□□□□ -0.44
CEACAM1-208ENST00000403461 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
CEACAM1-208ENST00000403461 PDE4AP27815 886 aa12.28□□□□□ -0.44
CEACAM1-208ENST00000403461 CHMP7Q8WUX9 453 aaPredicted RBP12.28□□□□□ -0.44
CEACAM1-208ENST00000403461 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
CEACAM1-208ENST00000403461 WDR70Q9NW82 654 aa12.27□□□□□ -0.45
CEACAM1-208ENST00000403461 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.45
CEACAM1-208ENST00000403461 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
CEACAM1-208ENST00000403461 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
CEACAM1-208ENST00000403461 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
CEACAM1-208ENST00000403461 HS3ST6Q96QI5 342 aa12.25□□□□□ -0.45
CEACAM1-208ENST00000403461 RAD54L2Q9Y4B4 1467 aa12.25□□□□□ -0.45
CEACAM1-208ENST00000403461 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
CEACAM1-208ENST00000403461 SPNS2Q8IVW8 549 aa12.24□□□□□ -0.45
CEACAM1-208ENST00000403461 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
CEACAM1-208ENST00000403461 LARP6Q9BRS8 491 aaKnown RBP12.23□□□□□ -0.45
CEACAM1-208ENST00000403461 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
CEACAM1-208ENST00000403461 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.45
CEACAM1-208ENST00000403461 CHD1O14646 1710 aa12.21□□□□□ -0.45
CEACAM1-208ENST00000403461 MMRN1Q13201 1228 aa12.21□□□□□ -0.45
CEACAM1-208ENST00000403461 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.45
CEACAM1-208ENST00000403461 WDR97A6NE52 1622 aa12.21□□□□□ -0.46
CEACAM1-208ENST00000403461 GRIN2BQ13224 1484 aa12.21□□□□□ -0.46
CEACAM1-208ENST00000403461 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.46
CEACAM1-208ENST00000403461 MFSD10Q14728 455 aa12.2□□□□□ -0.46
CEACAM1-208ENST00000403461 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
CEACAM1-208ENST00000403461 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 223.3 ms