RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 MAGI3Q5TCQ9 1506 aa8.48□□□□□ -1.05
PTPRD-206ENST00000397617 NEURL4Q96JN8 1562 aa8.48□□□□□ -1.05
PTPRD-206ENST00000397617 PLXNC1O60486 1568 aa8.48□□□□□ -1.05
PTPRD-206ENST00000397617 FAM135AQ9P2D6 1515 aa8.47□□□□□ -1.05
PTPRD-206ENST00000397617 DAPK1P53355 1430 aa8.47□□□□□ -1.05
PTPRD-206ENST00000397617 CCDC141Q6ZP82 1450 aa8.47□□□□□ -1.05
PTPRD-206ENST00000397617 CHD1O14646 1710 aa8.47□□□□□ -1.05
PTPRD-206ENST00000397617 MAPKBP1O60336 1514 aa8.46□□□□□ -1.05
PTPRD-206ENST00000397617 PREX2Q70Z35 1606 aa8.46□□□□□ -1.05
PTPRD-206ENST00000397617 ARID4BQ4LE39 1312 aaPredicted RBP8.46□□□□□ -1.06
PTPRD-206ENST00000397617 CFDP1Q9UEE9 299 aaPredicted RBP8.46□□□□□ -1.06
PTPRD-206ENST00000397617 RPRD2Q5VT52 1461 aaKnown RBP8.44□□□□□ -1.06
PTPRD-206ENST00000397617 PLB1Q6P1J6 1458 aa8.44□□□□□ -1.06
PTPRD-206ENST00000397617 TSPY4P0CV99 314 aa8.44□□□□□ -1.06
PTPRD-206ENST00000397617 TSPY10P0CW01 314 aa8.44□□□□□ -1.06
PTPRD-206ENST00000397617 MAGI2Q86UL8 1455 aa8.44□□□□□ -1.06
PTPRD-206ENST00000397617 MBD5Q9P267 1494 aa8.44□□□□□ -1.06
PTPRD-206ENST00000397617 ABCC5O15440 1437 aa8.44□□□□□ -1.06
PTPRD-206ENST00000397617 HNRNPUL2Q1KMD3 747 aaKnown RBP8.44□□□□□ -1.06
PTPRD-206ENST00000397617 CAMSAP2Q08AD1 1489 aa8.43□□□□□ -1.06
PTPRD-206ENST00000397617 CROCC2H7BZ55 1655 aa8.43□□□□□ -1.06
PTPRD-206ENST00000397617 CDC42BPAQ5VT25 1732 aa8.43□□□□□ -1.06
PTPRD-206ENST00000397617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.43□□□□□ -1.06
PTPRD-206ENST00000397617 CDK13Q14004 1512 aaKnown RBP8.43□□□□□ -1.06
PTPRD-206ENST00000397617 PLCH2O75038 1416 aa8.43□□□□□ -1.06
PTPRD-206ENST00000397617 EFCAB2Q5VUJ9 269 aa8.42□□□□□ -1.06
PTPRD-206ENST00000397617 ANKRD50Q9ULJ7 1429 aa8.42□□□□□ -1.06
PTPRD-206ENST00000397617 MYO5CQ9NQX4 1742 aa8.42□□□□□ -1.06
PTPRD-206ENST00000397617 ERBINQ96RT1 1412 aa8.41□□□□□ -1.06
PTPRD-206ENST00000397617 TONSLQ96HA7 1378 aa8.41□□□□□ -1.06
PTPRD-206ENST00000397617 PPP1R15AO75807 674 aaPredicted RBP8.4□□□□□ -1.06
PTPRD-206ENST00000397617 C9orf84Q5VXU9 1444 aa8.4□□□□□ -1.06
PTPRD-206ENST00000397617 CFAP74Q9C0B2 1584 aa8.4□□□□□ -1.07
PTPRD-206ENST00000397617 PELP1Q8IZL8 1130 aaKnown RBP8.39□□□□□ -1.07
PTPRD-206ENST00000397617 EHMT2Q96KQ7 1210 aa8.39□□□□□ -1.07
PTPRD-206ENST00000397617 NEO1Q92859 1461 aa8.39□□□□□ -1.07
PTPRD-206ENST00000397617 ANKRD30BQ9BXX2 1392 aa8.39□□□□□ -1.07
PTPRD-206ENST00000397617 ABCA9Q8IUA7 1624 aa8.39□□□□□ -1.07
PTPRD-206ENST00000397617 DUOX2Q9NRD8 1548 aa8.38□□□□□ -1.07
PTPRD-206ENST00000397617 FAM50AQ14320 339 aaKnown RBP8.38□□□□□ -1.07
PTPRD-206ENST00000397617 CENPBP07199 599 aaPredicted RBP8.38□□□□□ -1.07
PTPRD-206ENST00000397617 PTPRKQ15262 1439 aa8.38□□□□□ -1.07
PTPRD-206ENST00000397617 UNC13BO14795 1591 aa8.37□□□□□ -1.07
PTPRD-206ENST00000397617 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
PTPRD-206ENST00000397617 EIF2AK4Q9P2K8 1649 aaKnown RBP8.37□□□□□ -1.07
PTPRD-206ENST00000397617 KTN1Q86UP2 1357 aaKnown RBP8.37□□□□□ -1.07
PTPRD-206ENST00000397617 ROCK2O75116 1388 aaKnown RBP8.37□□□□□ -1.07
PTPRD-206ENST00000397617 BCORL1Q5H9F3 1711 aa8.36□□□□□ -1.07
PTPRD-206ENST00000397617 P3H3Q8IVL6 736 aa8.36□□□□□ -1.07
PTPRD-206ENST00000397617 OSCARQ8IYS5 282 aa8.36□□□□□ -1.07
PTPRD-206ENST00000397617 KIF15Q9NS87 1388 aa8.36□□□□□ -1.07
PTPRD-206ENST00000397617 ABCC1P33527 1531 aa8.35□□□□□ -1.07
PTPRD-206ENST00000397617 PRDM15P57071 1507 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-206ENST00000397617 DIEXFQ68CQ4 756 aaKnown RBP8.35□□□□□ -1.07
PTPRD-206ENST00000397617 MLH3Q9UHC1 1453 aa8.34□□□□□ -1.07
PTPRD-206ENST00000397617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPRD-206ENST00000397617 WASHC2AQ641Q2 1341 aa8.33□□□□□ -1.08
PTPRD-206ENST00000397617 WASHC2CQ9Y4E1 1318 aa8.33□□□□□ -1.08
PTPRD-206ENST00000397617 GPRASP1Q5JY77 1395 aa8.33□□□□□ -1.08
PTPRD-206ENST00000397617 GLI2P10070 1586 aa8.33□□□□□ -1.08
PTPRD-206ENST00000397617 CDC42BPBQ9Y5S2 1711 aa8.33□□□□□ -1.08
PTPRD-206ENST00000397617 LMTK2Q8IWU2 1503 aa8.32□□□□□ -1.08
PTPRD-206ENST00000397617 IQGAP3Q86VI3 1631 aa8.32□□□□□ -1.08
PTPRD-206ENST00000397617 CCER2I3L3R5 266 aa8.32□□□□□ -1.08
PTPRD-206ENST00000397617 LAMC1P11047 1609 aa8.32□□□□□ -1.08
PTPRD-206ENST00000397617 PPP6R1Q9UPN7 881 aa8.32□□□□□ -1.08
PTPRD-206ENST00000397617 ZMYM4Q5VZL5 1548 aa8.31□□□□□ -1.08
PTPRD-206ENST00000397617 RANGAP1P46060 587 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-206ENST00000397617 FBLN2P98095 1184 aa8.31□□□□□ -1.08
PTPRD-206ENST00000397617 PZPP20742 1482 aa8.31□□□□□ -1.08
PTPRD-206ENST00000397617 ZNF518AQ6AHZ1 1483 aa8.31□□□□□ -1.08
PTPRD-206ENST00000397617 INSRP06213 1382 aa8.31□□□□□ -1.08
PTPRD-206ENST00000397617 MPHOSPH9Q99550 1183 aa8.31□□□□□ -1.08
PTPRD-206ENST00000397617 ATP1B4Q9UN42 357 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-206ENST00000397617 VWDEQ8N2E2 1590 aa8.3□□□□□ -1.08
PTPRD-206ENST00000397617 NPM1P06748 294 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPRD-206ENST00000397617 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
PTPRD-206ENST00000397617 DEPDC5O75140 1603 aa8.3□□□□□ -1.08
PTPRD-206ENST00000397617 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
PTPRD-206ENST00000397617 KDM5CP41229 1560 aa8.3□□□□□ -1.08
PTPRD-206ENST00000397617 SAMD9LQ8IVG5 1584 aa8.3□□□□□ -1.08
PTPRD-206ENST00000397617 REREQ9P2R6 1566 aa8.29□□□□□ -1.08
PTPRD-206ENST00000397617 INO80Q9ULG1 1556 aaPredicted RBP8.29□□□□□ -1.08
PTPRD-206ENST00000397617 SBNO2Q9Y2G9 1366 aa8.29□□□□□ -1.08
PTPRD-206ENST00000397617 ARHGAP5Q13017 1502 aa8.28□□□□□ -1.08
PTPRD-206ENST00000397617 ARHGAP31Q2M1Z3 1444 aa8.28□□□□□ -1.08
PTPRD-206ENST00000397617 POLR1AO95602 1720 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-206ENST00000397617 SCAPERQ9BY12 1400 aa8.28□□□□□ -1.08
PTPRD-206ENST00000397617 RALGAPBQ86X10 1494 aa8.28□□□□□ -1.08
PTPRD-206ENST00000397617 PTPRTO14522 1441 aa8.28□□□□□ -1.08
PTPRD-206ENST00000397617 SPATA31E1Q6ZUB1 1445 aa8.27□□□□□ -1.09
PTPRD-206ENST00000397617 TTC37Q6PGP7 1564 aa8.27□□□□□ -1.09
PTPRD-206ENST00000397617 DENND4BO75064 1496 aaPredicted RBP8.26□□□□□ -1.09
PTPRD-206ENST00000397617 SLC4A1APQ9BWU0 796 aaKnown RBP8.26□□□□□ -1.09
PTPRD-206ENST00000397617 KANK1Q14678 1352 aa8.26□□□□□ -1.09
PTPRD-206ENST00000397617 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTPRD-206ENST00000397617 ZFYVE16Q7Z3T8 1539 aa8.26□□□□□ -1.09
PTPRD-206ENST00000397617 TET3O43151 1660 aa8.26□□□□□ -1.09
PTPRD-206ENST00000397617 NUP155O75694 1391 aa8.26□□□□□ -1.09
PTPRD-206ENST00000397617 RNF17Q9BXT8 1623 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms