RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 CD109Q6YHK3 1445 aa16.96■□□□□ 0.31
NUP98-205ENST00000397007 KANK4Q5T7N3 995 aaPredicted RBP16.96■□□□□ 0.31
NUP98-205ENST00000397007 MBD5Q9P267 1494 aa16.95■□□□□ 0.3
NUP98-205ENST00000397007 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
NUP98-205ENST00000397007 PHLDB1Q86UU1 1377 aa16.95■□□□□ 0.3
NUP98-205ENST00000397007 MIA2Q96PC5 1412 aa16.94■□□□□ 0.3
NUP98-205ENST00000397007 DNMT1P26358 1616 aaKnown RBP16.94■□□□□ 0.3
NUP98-205ENST00000397007 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
NUP98-205ENST00000397007 KIDINS220Q9ULH0 1771 aa16.93■□□□□ 0.3
NUP98-205ENST00000397007 ADGBQ8N7X0 1667 aa16.93■□□□□ 0.3
NUP98-205ENST00000397007 FANCAO15360 1455 aa16.92■□□□□ 0.3
NUP98-205ENST00000397007 MYOM3Q5VTT5 1437 aa16.92■□□□□ 0.3
NUP98-205ENST00000397007 KIAA1107Q9UPP5 1409 aa16.92■□□□□ 0.3
NUP98-205ENST00000397007 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
NUP98-205ENST00000397007 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
NUP98-205ENST00000397007 KDM6BO15054 1643 aa16.9■□□□□ 0.3
NUP98-205ENST00000397007 RRBP1Q9P2E9 1410 aaKnown RBP16.89■□□□□ 0.29
NUP98-205ENST00000397007 PLXNC1O60486 1568 aa16.89■□□□□ 0.29
NUP98-205ENST00000397007 CAMSAP2Q08AD1 1489 aa16.88■□□□□ 0.29
NUP98-205ENST00000397007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.88■□□□□ 0.29
NUP98-205ENST00000397007 TTBK1Q5TCY1 1321 aaPredicted RBP16.88■□□□□ 0.29
NUP98-205ENST00000397007 POGZQ7Z3K3 1410 aa16.87■□□□□ 0.29
NUP98-205ENST00000397007 SYCP2Q9BX26 1530 aa16.87■□□□□ 0.29
NUP98-205ENST00000397007 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
NUP98-205ENST00000397007 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
NUP98-205ENST00000397007 ZFYVE16Q7Z3T8 1539 aa16.87■□□□□ 0.29
NUP98-205ENST00000397007 ARHGEF40Q8TER5 1519 aa16.87■□□□□ 0.29
NUP98-205ENST00000397007 ABCA6Q8N139 1617 aa16.87■□□□□ 0.29
NUP98-205ENST00000397007 MTUS2Q5JR59 1369 aa16.86■□□□□ 0.29
NUP98-205ENST00000397007 HECW2Q9P2P5 1572 aa16.86■□□□□ 0.29
NUP98-205ENST00000397007 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
NUP98-205ENST00000397007 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
NUP98-205ENST00000397007 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
NUP98-205ENST00000397007 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
NUP98-205ENST00000397007 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
NUP98-205ENST00000397007 DIP2CQ9Y2E4 1556 aa16.83■□□□□ 0.29
NUP98-205ENST00000397007 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
NUP98-205ENST00000397007 ADGRL1O94910 1474 aa16.81■□□□□ 0.28
NUP98-205ENST00000397007 MAGI2Q86UL8 1455 aa16.81■□□□□ 0.28
NUP98-205ENST00000397007 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
NUP98-205ENST00000397007 ADGRL2O95490 1459 aa16.79■□□□□ 0.28
NUP98-205ENST00000397007 ZNF518AQ6AHZ1 1483 aa16.79■□□□□ 0.28
NUP98-205ENST00000397007 DEPDC5O75140 1603 aa16.78■□□□□ 0.28
NUP98-205ENST00000397007 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
NUP98-205ENST00000397007 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
NUP98-205ENST00000397007 TRAPPC8Q9Y2L5 1435 aa16.77■□□□□ 0.28
NUP98-205ENST00000397007 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.27
NUP98-205ENST00000397007 RTEL1-TNFRSF6BF6WH68 1400 aa16.76■□□□□ 0.27
NUP98-205ENST00000397007 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
NUP98-205ENST00000397007 DENND4BO75064 1496 aaPredicted RBP16.75■□□□□ 0.27
NUP98-205ENST00000397007 RNF17Q9BXT8 1623 aaKnown RBP16.75■□□□□ 0.27
NUP98-205ENST00000397007 CCDC141Q6ZP82 1450 aa16.74■□□□□ 0.27
NUP98-205ENST00000397007 MROH1Q8NDA8 1641 aa16.74■□□□□ 0.27
NUP98-205ENST00000397007 AGLP35573 1532 aa16.73■□□□□ 0.27
NUP98-205ENST00000397007 ABCC5O15440 1437 aa16.73■□□□□ 0.27
NUP98-205ENST00000397007 KCNH8Q96L42 1107 aa16.72■□□□□ 0.27
NUP98-205ENST00000397007 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
NUP98-205ENST00000397007 DAPK1P53355 1430 aa16.71■□□□□ 0.27
NUP98-205ENST00000397007 SCAPERQ9BY12 1400 aa16.71■□□□□ 0.27
NUP98-205ENST00000397007 ADAMTSL3P82987 1691 aa16.7■□□□□ 0.26
NUP98-205ENST00000397007 VWDEQ8N2E2 1590 aa16.68■□□□□ 0.26
NUP98-205ENST00000397007 EFCAB2Q5VUJ9 269 aa16.66■□□□□ 0.26
NUP98-205ENST00000397007 UNC13BO14795 1591 aa16.66■□□□□ 0.26
NUP98-205ENST00000397007 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
NUP98-205ENST00000397007 FAM135AQ9P2D6 1515 aa16.65■□□□□ 0.26
NUP98-205ENST00000397007 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
NUP98-205ENST00000397007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
NUP98-205ENST00000397007 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
NUP98-205ENST00000397007 ATP1B4Q9UN42 357 aaPredicted RBP16.65■□□□□ 0.26
NUP98-205ENST00000397007 YEATS2Q9ULM3 1422 aa16.64■□□□□ 0.25
NUP98-205ENST00000397007 ROCK1Q13464 1354 aa16.63■□□□□ 0.25
NUP98-205ENST00000397007 ZC3H13Q5T200 1668 aaKnown RBP16.62■□□□□ 0.25
NUP98-205ENST00000397007 PRDM15P57071 1507 aaPredicted RBP16.62■□□□□ 0.25
NUP98-205ENST00000397007 KDM5DQ9BY66 1539 aa16.61■□□□□ 0.25
NUP98-205ENST00000397007 DUOX2Q9NRD8 1548 aa16.6■□□□□ 0.25
NUP98-205ENST00000397007 CFDP1Q9UEE9 299 aaPredicted RBP16.6■□□□□ 0.25
NUP98-205ENST00000397007 ATP10AO60312 1499 aa16.6■□□□□ 0.25
NUP98-205ENST00000397007 C9orf84Q5VXU9 1444 aa16.6■□□□□ 0.25
NUP98-205ENST00000397007 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
NUP98-205ENST00000397007 NCOA1Q15788 1441 aa16.59■□□□□ 0.25
NUP98-205ENST00000397007 RSPH4AQ5TD94 716 aa16.58■□□□□ 0.24
NUP98-205ENST00000397007 ERBINQ96RT1 1412 aa16.56■□□□□ 0.24
NUP98-205ENST00000397007 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
NUP98-205ENST00000397007 FER1L4A9Z1Z3 1794 aa16.55■□□□□ 0.24
NUP98-205ENST00000397007 LMTK2Q8IWU2 1503 aa16.54■□□□□ 0.24
NUP98-205ENST00000397007 RAPGEF3O95398 923 aa16.53■□□□□ 0.24
NUP98-205ENST00000397007 A2MP01023 1474 aa16.53■□□□□ 0.24
NUP98-205ENST00000397007 HFM1A2PYH4 1435 aa16.51■□□□□ 0.23
NUP98-205ENST00000397007 APLP2Q06481 763 aa16.51■□□□□ 0.23
NUP98-205ENST00000397007 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.23
NUP98-205ENST00000397007 AFAP1Q8N556 730 aa16.51■□□□□ 0.23
NUP98-205ENST00000397007 CEP152O94986 1710 aa16.51■□□□□ 0.23
NUP98-205ENST00000397007 NAIPQ13075 1403 aa16.5■□□□□ 0.23
NUP98-205ENST00000397007 C3P01024 1663 aa16.49■□□□□ 0.23
NUP98-205ENST00000397007 CAMSAP1Q5T5Y3 1602 aa16.49■□□□□ 0.23
NUP98-205ENST00000397007 MADDQ8WXG6 1647 aa16.49■□□□□ 0.23
NUP98-205ENST00000397007 DHX29Q7Z478 1369 aaKnown RBP16.49■□□□□ 0.23
NUP98-205ENST00000397007 CLTCQ00610 1675 aaKnown RBP16.47■□□□□ 0.23
NUP98-205ENST00000397007 TET3O43151 1660 aa16.47■□□□□ 0.23
NUP98-205ENST00000397007 ABCC3O15438 1527 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms