RNA–Protein interactions for RNA: ENST00000396075.5

LDHB-202, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-202ENST00000396075 CLIP1P30622 1438 aa13.64□□□□□ -0.23
LDHB-202ENST00000396075 ARID4BQ4LE39 1312 aaPredicted RBP13.64□□□□□ -0.23
LDHB-202ENST00000396075 ADAMTSL3P82987 1691 aa13.63□□□□□ -0.23
LDHB-202ENST00000396075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.62□□□□□ -0.231e-10■■□□□ 13.8
LDHB-202ENST00000396075 FRMPD1Q5SYB0 1578 aa13.62□□□□□ -0.23
LDHB-202ENST00000396075 CDK13Q14004 1512 aaKnown RBP13.61□□□□□ -0.23
LDHB-202ENST00000396075 PLCH2O75038 1416 aa13.61□□□□□ -0.23
LDHB-202ENST00000396075 MADDQ8WXG6 1647 aa13.61□□□□□ -0.23
LDHB-202ENST00000396075 BCORL1Q5H9F3 1711 aa13.6□□□□□ -0.23
LDHB-202ENST00000396075 PTPRMP28827 1452 aa13.6□□□□□ -0.23
LDHB-202ENST00000396075 CCDC18Q5T9S5 1454 aa13.58□□□□□ -0.24
LDHB-202ENST00000396075 RIMS1Q86UR5 1692 aaKnown RBP13.58□□□□□ -0.24
LDHB-202ENST00000396075 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
LDHB-202ENST00000396075 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
LDHB-202ENST00000396075 CASKIN1Q8WXD9 1431 aa13.57□□□□□ -0.24
LDHB-202ENST00000396075 MAGI2Q86UL8 1455 aa13.57□□□□□ -0.24
LDHB-202ENST00000396075 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
LDHB-202ENST00000396075 SCAPERQ9BY12 1400 aa13.56□□□□□ -0.24
LDHB-202ENST00000396075 KIF14Q15058 1648 aa13.55□□□□□ -0.24
LDHB-202ENST00000396075 SIGLEC1Q9BZZ2 1709 aa13.55□□□□□ -0.24
LDHB-202ENST00000396075 TTC37Q6PGP7 1564 aa13.54□□□□□ -0.24
LDHB-202ENST00000396075 RICTORQ6R327 1708 aa13.54□□□□□ -0.24
LDHB-202ENST00000396075 MYO5CQ9NQX4 1742 aa13.53□□□□□ -0.24
LDHB-202ENST00000396075 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
LDHB-202ENST00000396075 PCF11O94913 1555 aaKnown RBP13.52□□□□□ -0.25
LDHB-202ENST00000396075 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
LDHB-202ENST00000396075 ARHGEF40Q8TER5 1519 aa13.51□□□□□ -0.25
LDHB-202ENST00000396075 FYCO1Q9BQS8 1478 aa13.51□□□□□ -0.25
LDHB-202ENST00000396075 ZMYM4Q5VZL5 1548 aa13.5□□□□□ -0.25
LDHB-202ENST00000396075 ZFYVE16Q7Z3T8 1539 aa13.49□□□□□ -0.25
LDHB-202ENST00000396075 HSPA2P54652 639 aa13.49□□□□□ -0.25
LDHB-202ENST00000396075 ZNF518AQ6AHZ1 1483 aa13.48□□□□□ -0.25
LDHB-202ENST00000396075 ATP10AO60312 1499 aa13.47□□□□□ -0.25
LDHB-202ENST00000396075 MLECQ14165 292 aa13.46□□□□□ -0.25
LDHB-202ENST00000396075 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
LDHB-202ENST00000396075 CERKQ8TCT0 537 aa13.46□□□□□ -0.25
LDHB-202ENST00000396075 YEATS2Q9ULM3 1422 aa13.46□□□□□ -0.26
LDHB-202ENST00000396075 FER1L4A9Z1Z3 1794 aa13.45□□□□□ -0.26
LDHB-202ENST00000396075 ESF1Q9H501 851 aaKnown RBP13.45□□□□□ -0.26
LDHB-202ENST00000396075 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
LDHB-202ENST00000396075 ZNF777Q9ULD5 760 aaPredicted RBP13.44□□□□□ -0.26
LDHB-202ENST00000396075 C9orf84Q5VXU9 1444 aa13.44□□□□□ -0.26
LDHB-202ENST00000396075 LRRIQ1Q96JM4 1722 aa13.44□□□□□ -0.26
LDHB-202ENST00000396075 CFDP1Q9UEE9 299 aaPredicted RBP13.43□□□□□ -0.26
LDHB-202ENST00000396075 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
LDHB-202ENST00000396075 CDC42BPBQ9Y5S2 1711 aa13.41□□□□□ -0.26
LDHB-202ENST00000396075 PREX2Q70Z35 1606 aa13.4□□□□□ -0.26
LDHB-202ENST00000396075 PLEKHH2Q8IVE3 1493 aa13.4□□□□□ -0.26
LDHB-202ENST00000396075 MLH3Q9UHC1 1453 aa13.4□□□□□ -0.26
LDHB-202ENST00000396075 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
LDHB-202ENST00000396075 KDM5CP41229 1560 aa13.38□□□□□ -0.27
LDHB-202ENST00000396075 SPAG9O60271 1321 aaKnown RBP13.38□□□□□ -0.27
LDHB-202ENST00000396075 GPATCH8Q9UKJ3 1502 aaKnown RBP13.37□□□□□ -0.27
LDHB-202ENST00000396075 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
LDHB-202ENST00000396075 KIAA1107Q9UPP5 1409 aa13.36□□□□□ -0.27
LDHB-202ENST00000396075 CDC42BPAQ5VT25 1732 aa13.36□□□□□ -0.27
LDHB-202ENST00000396075 ABCC1P33527 1531 aa13.35□□□□□ -0.27
LDHB-202ENST00000396075 CEBPAP49715 358 aaPredicted RBP13.35□□□□□ -0.27
LDHB-202ENST00000396075 RSPH4AQ5TD94 716 aa13.35□□□□□ -0.27
LDHB-202ENST00000396075 TRAPPC8Q9Y2L5 1435 aa13.35□□□□□ -0.27
LDHB-202ENST00000396075 PREX1Q8TCU6 1659 aa13.34□□□□□ -0.27
LDHB-202ENST00000396075 ITSN2Q9NZM3 1697 aa13.34□□□□□ -0.27
LDHB-202ENST00000396075 REREQ9P2R6 1566 aa13.33□□□□□ -0.28
LDHB-202ENST00000396075 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
LDHB-202ENST00000396075 ARHGEF12Q9NZN5 1544 aa13.33□□□□□ -0.28
LDHB-202ENST00000396075 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
LDHB-202ENST00000396075 APLP2Q06481 763 aa13.32□□□□□ -0.28
LDHB-202ENST00000396075 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
LDHB-202ENST00000396075 AGLP35573 1532 aa13.31□□□□□ -0.28
LDHB-202ENST00000396075 DIP2CQ9Y2E4 1556 aa13.31□□□□□ -0.28
LDHB-202ENST00000396075 SETD1BQ9UPS6 1966 aaKnown RBP13.31□□□□□ -0.28
LDHB-202ENST00000396075 CNTLNQ9NXG0 1405 aa13.3□□□□□ -0.28
LDHB-202ENST00000396075 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
LDHB-202ENST00000396075 SAMD9LQ8IVG5 1584 aa13.28□□□□□ -0.28
LDHB-202ENST00000396075 TSPY4P0CV99 314 aa13.28□□□□□ -0.28
LDHB-202ENST00000396075 TSPY10P0CW01 314 aa13.28□□□□□ -0.28
LDHB-202ENST00000396075 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.28
LDHB-202ENST00000396075 VPS8Q8N3P4 1428 aa13.27□□□□□ -0.29
LDHB-202ENST00000396075 ABCA6Q8N139 1617 aa13.27□□□□□ -0.29
LDHB-202ENST00000396075 C3P01024 1663 aa13.26□□□□□ -0.29
LDHB-202ENST00000396075 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
LDHB-202ENST00000396075 SUPT6HQ7KZ85 1726 aaKnown RBP13.26□□□□□ -0.29
LDHB-202ENST00000396075 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
LDHB-202ENST00000396075 A2MP01023 1474 aa13.24□□□□□ -0.29
LDHB-202ENST00000396075 RTEL1-TNFRSF6BF6WH68 1400 aa13.24□□□□□ -0.29
LDHB-202ENST00000396075 GGT6Q6P531 493 aa13.24□□□□□ -0.29
LDHB-202ENST00000396075 TIAM1Q13009 1591 aa13.24□□□□□ -0.29
LDHB-202ENST00000396075 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
LDHB-202ENST00000396075 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
LDHB-202ENST00000396075 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
LDHB-202ENST00000396075 ZMYM3Q14202 1370 aa13.21□□□□□ -0.29
LDHB-202ENST00000396075 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
LDHB-202ENST00000396075 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
LDHB-202ENST00000396075 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
LDHB-202ENST00000396075 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
LDHB-202ENST00000396075 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
LDHB-202ENST00000396075 CCDC141Q6ZP82 1450 aa13.19□□□□□ -0.3
LDHB-202ENST00000396075 INO80Q9ULG1 1556 aaPredicted RBP13.19□□□□□ -0.3
LDHB-202ENST00000396075 NPATQ14207 1427 aa13.18□□□□□ -0.3
LDHB-202ENST00000396075 CAMSAP2Q08AD1 1489 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms