RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 A0A0G2JS52 829 aa7.32□□□□□ -1.24
XRCC4-203ENST00000396027 TK2O00142 265 aa7.32□□□□□ -1.24
XRCC4-203ENST00000396027 POTEEQ6S8J3 1075 aa7.3□□□□□ -1.24
XRCC4-203ENST00000396027 AXIN2Q9Y2T1 843 aa7.3□□□□□ -1.24
XRCC4-203ENST00000396027 KHSRPQ92945 711 aaKnown RBP eCLIP7.29□□□□□ -1.246e-10■■■□□ 17.2
XRCC4-203ENST00000396027 ARHGAP33O14559 1287 aa7.28□□□□□ -1.24
XRCC4-203ENST00000396027 KCTD12Q96CX2 325 aaKnown RBP7.28□□□□□ -1.24
XRCC4-203ENST00000396027 STAC3Q96MF2 364 aa7.27□□□□□ -1.25
XRCC4-203ENST00000396027 HRO43593 1189 aa7.26□□□□□ -1.25
XRCC4-203ENST00000396027 PSDA5PKW4 1024 aaPredicted RBP7.24□□□□□ -1.25
XRCC4-203ENST00000396027 NUDT7P0C024 238 aa7.22□□□□□ -1.25
XRCC4-203ENST00000396027 LAPTM4AQ15012 233 aa7.22□□□□□ -1.25
XRCC4-203ENST00000396027 LHX6Q9UPM6 363 aa7.22□□□□□ -1.25
XRCC4-203ENST00000396027 EHMT2Q96KQ7 1210 aa7.2□□□□□ -1.26
XRCC4-203ENST00000396027 EFCAB3Q8N7B9 438 aa7.19□□□□□ -1.26
XRCC4-203ENST00000396027 PTPN5P54829 565 aa7.18□□□□□ -1.26
XRCC4-203ENST00000396027 SOX12O15370 315 aa7.16□□□□□ -1.26
XRCC4-203ENST00000396027 TRAF7Q6Q0C0 670 aa7.16□□□□□ -1.26
XRCC4-203ENST00000396027 KLHL34Q8N239 644 aa7.15□□□□□ -1.27
XRCC4-203ENST00000396027 SLC34A2O95436 690 aa7.14□□□□□ -1.27
XRCC4-203ENST00000396027 PCDHGA4Q9Y5G9 962 aa7.14□□□□□ -1.27
XRCC4-203ENST00000396027 DMRTA1Q5VZB9 504 aa7.13□□□□□ -1.27
XRCC4-203ENST00000396027 FBXO3Q9UK99 471 aa7.11□□□□□ -1.27
XRCC4-203ENST00000396027 PSEN2P49810 448 aa7.1□□□□□ -1.27
XRCC4-203ENST00000396027 KCNH8Q96L42 1107 aa7.1□□□□□ -1.27
XRCC4-203ENST00000396027 THSD4Q6ZMP0 1018 aa7.09□□□□□ -1.27
XRCC4-203ENST00000396027 MS4A4AQ96JQ5 239 aa7.07□□□□□ -1.28
XRCC4-203ENST00000396027 LCE2BO14633 110 aa7.06□□□□□ -1.28
XRCC4-203ENST00000396027 KIF3CO14782 793 aa7.06□□□□□ -1.28
XRCC4-203ENST00000396027 PPP4R3BQ5MIZ7 849 aa7.05□□□□□ -1.28
XRCC4-203ENST00000396027 ITGBL1O95965 494 aaPredicted RBP7.04□□□□□ -1.28
XRCC4-203ENST00000396027 ZNF787Q6DD87 383 aa7.04□□□□□ -1.28
XRCC4-203ENST00000396027 GOLGA8CPA6NN73 597 aa7.03□□□□□ -1.28
XRCC4-203ENST00000396027 VPS9D1Q9Y2B5 631 aa7.03□□□□□ -1.28
XRCC4-203ENST00000396027 GFRA3O60609 400 aa7.02□□□□□ -1.29
XRCC4-203ENST00000396027 C2orf72A6NCS6 295 aa7.01□□□□□ -1.29
XRCC4-203ENST00000396027 WNT2BQ93097 391 aa7.01□□□□□ -1.29
XRCC4-203ENST00000396027 ZNF775Q96BV0 537 aaPredicted RBP7.01□□□□□ -1.29
XRCC4-203ENST00000396027 SLC4A5Q9BY07 1137 aa7.01□□□□□ -1.29
XRCC4-203ENST00000396027 PHF8Q9UPP1 1060 aa7.01□□□□□ -1.29
XRCC4-203ENST00000396027 CIZ1Q9ULV3 898 aaPredicted RBP7□□□□□ -1.29
XRCC4-203ENST00000396027 KDM4FA0A1W2PPD8 638 aa6.99□□□□□ -1.29
XRCC4-203ENST00000396027 NRG2O14511 850 aaPredicted RBP6.99□□□□□ -1.29
XRCC4-203ENST00000396027 TRIM41Q8WV44 630 aa6.98□□□□□ -1.29
XRCC4-203ENST00000396027 KCNK17Q96T54 332 aa6.98□□□□□ -1.29
XRCC4-203ENST00000396027 NLRP6P59044 892 aa6.97□□□□□ -1.29
XRCC4-203ENST00000396027 BHMG1C9JSJ3 638 aaPredicted RBP6.96□□□□□ -1.3
XRCC4-203ENST00000396027 VASPP50552 380 aaPredicted RBP6.96□□□□□ -1.3
XRCC4-203ENST00000396027 MRPL50Q8N5N7 158 aaKnown RBP6.95□□□□□ -1.3
XRCC4-203ENST00000396027 TMC2Q8TDI7 906 aa6.94□□□□□ -1.3
XRCC4-203ENST00000396027 PTCD2Q8WV60 388 aaKnown RBP6.93□□□□□ -1.3
XRCC4-203ENST00000396027 NYAP1Q6ZVC0 841 aa6.92□□□□□ -1.3
XRCC4-203ENST00000396027 SPOCK2Q92563 424 aa6.92□□□□□ -1.3
XRCC4-203ENST00000396027 KCNC4Q03721 635 aa6.91□□□□□ -1.3
XRCC4-203ENST00000396027 NBPF3Q9H094 633 aa6.91□□□□□ -1.3
XRCC4-203ENST00000396027 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.31
XRCC4-203ENST00000396027 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.31
XRCC4-203ENST00000396027 TBC1D12O60347 775 aa6.88□□□□□ -1.31
XRCC4-203ENST00000396027 FBXO22Q8NEZ5 403 aa6.88□□□□□ -1.31
XRCC4-203ENST00000396027 FKBP8Q14318 412 aa6.87□□□□□ -1.31
XRCC4-203ENST00000396027 ANKK1Q8NFD2 765 aa6.86□□□□□ -1.31
XRCC4-203ENST00000396027 BCL2L12Q9HB09 334 aa6.86□□□□□ -1.31
XRCC4-203ENST00000396027 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.85□□□□□ -1.31
XRCC4-203ENST00000396027 RIOK3O14730 519 aaKnown RBP6.85□□□□□ -1.31
XRCC4-203ENST00000396027 VGFO15240 615 aaPredicted RBP6.85□□□□□ -1.31
XRCC4-203ENST00000396027 ZFP91Q96JP5 570 aaPredicted RBP6.85□□□□□ -1.31
XRCC4-203ENST00000396027 ZBED2Q9BTP6 218 aa6.84□□□□□ -1.31
XRCC4-203ENST00000396027 PTPREP23469 700 aa6.83□□□□□ -1.32
XRCC4-203ENST00000396027 V9GY48 417 aaPredicted RBP6.81□□□□□ -1.32
XRCC4-203ENST00000396027 PRKD2Q9BZL6 878 aa6.81□□□□□ -1.32
XRCC4-203ENST00000396027 STK17AQ9UEE5 414 aa6.81□□□□□ -1.32
XRCC4-203ENST00000396027 TREML4Q6UXN2 200 aa6.79□□□□□ -1.32
XRCC4-203ENST00000396027 ZNF454Q8N9F8 522 aa6.78□□□□□ -1.32
XRCC4-203ENST00000396027 SOWAHBA6NEL2 793 aa6.77□□□□□ -1.33
XRCC4-203ENST00000396027 PDZRN3Q9UPQ7 1066 aa6.77□□□□□ -1.33
XRCC4-203ENST00000396027 MFRPQ9BY79 579 aa6.76□□□□□ -1.33
XRCC4-203ENST00000396027 BCAMP50895 628 aa6.75□□□□□ -1.33
XRCC4-203ENST00000396027 FOXK1P85037 733 aa6.75□□□□□ -1.33
XRCC4-203ENST00000396027 LAPTM4BQ86VI4 370 aa6.75□□□□□ -1.33
XRCC4-203ENST00000396027 TAOK2Q9UL54 1235 aa6.75□□□□□ -1.33
XRCC4-203ENST00000396027 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
XRCC4-203ENST00000396027 RABGEF1Q9UJ41 708 aa6.74□□□□□ -1.33
XRCC4-203ENST00000396027 MYT1Q01538 1121 aa6.72□□□□□ -1.33
XRCC4-203ENST00000396027 IFNLR1Q8IU57 520 aaPredicted RBP6.72□□□□□ -1.33
XRCC4-203ENST00000396027 PLPP6Q8IY26 295 aa6.72□□□□□ -1.33
XRCC4-203ENST00000396027 WBP1LQ9NX94 342 aa6.71□□□□□ -1.33
XRCC4-203ENST00000396027 FOSBP53539 338 aa6.71□□□□□ -1.34
XRCC4-203ENST00000396027 RNF25Q96BH1 459 aaPredicted RBP6.71□□□□□ -1.34
XRCC4-203ENST00000396027 BCL11BQ9C0K0 894 aaPredicted RBP6.7□□□□□ -1.34
XRCC4-203ENST00000396027 INSM1Q01101 510 aaPredicted RBP6.69□□□□□ -1.34
XRCC4-203ENST00000396027 JPH4Q96JJ6 628 aa6.66□□□□□ -1.34
XRCC4-203ENST00000396027 ZFRQ96KR1 1074 aaKnown RBP6.66□□□□□ -1.34
XRCC4-203ENST00000396027 TSR3Q9UJK0 312 aaKnown RBP6.66□□□□□ -1.34
XRCC4-203ENST00000396027 STK24Q9Y6E0 443 aa6.66□□□□□ -1.34
XRCC4-203ENST00000396027 PPP1R3GB7ZBB8 358 aa6.66□□□□□ -1.34
XRCC4-203ENST00000396027 DGAT1O75907 488 aa6.66□□□□□ -1.34
XRCC4-203ENST00000396027 ZDHHC16Q969W1 377 aa6.66□□□□□ -1.34
XRCC4-203ENST00000396027 GPHNQ9NQX3 736 aaPredicted RBP6.66□□□□□ -1.34
XRCC4-203ENST00000396027 PKDCCQ504Y2 493 aa6.65□□□□□ -1.35
XRCC4-203ENST00000396027 PPP1R18Q6NYC8 613 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms