RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 MYOM3Q5VTT5 1437 aa26.47■■□□□ 1.83
CXXC4-201ENST00000394767 PLEKHG5O94827 1062 aa26.47■■□□□ 1.83
CXXC4-201ENST00000394767 PHLDB1Q86UU1 1377 aa26.46■■□□□ 1.83
CXXC4-201ENST00000394767 AFAP1Q8N556 730 aa26.44■■□□□ 1.82
CXXC4-201ENST00000394767 NCOA2Q15596 1464 aa26.44■■□□□ 1.82
CXXC4-201ENST00000394767 FGD6Q6ZV73 1430 aa26.43■■□□□ 1.82
CXXC4-201ENST00000394767 WDR62O43379 1518 aa26.4■■□□□ 1.82
CXXC4-201ENST00000394767 ARHGAP5Q13017 1502 aa26.39■■□□□ 1.81
CXXC4-201ENST00000394767 PLB1Q6P1J6 1458 aa26.38■■□□□ 1.81
CXXC4-201ENST00000394767 TROQ12816 1431 aaPredicted RBP26.38■■□□□ 1.81
CXXC4-201ENST00000394767 CDCA8Q53HL2 280 aa26.35■■□□□ 1.81
CXXC4-201ENST00000394767 HECW1Q76N89 1606 aa26.32■■□□□ 1.8
CXXC4-201ENST00000394767 TIMELESSQ9UNS1 1208 aa26.31■■□□□ 1.8
CXXC4-201ENST00000394767 STK26Q9P289 416 aa26.31■■□□□ 1.8
CXXC4-201ENST00000394767 CDK13Q14004 1512 aaKnown RBP26.3■■□□□ 1.8
CXXC4-201ENST00000394767 KIF15Q9NS87 1388 aa26.3■■□□□ 1.8
CXXC4-201ENST00000394767 SAFB2Q14151 953 aaKnown RBP eCLIP26.3■■□□□ 1.8
CXXC4-201ENST00000394767 EPRSP07814 1512 aaKnown RBP26.29■■□□□ 1.8
CXXC4-201ENST00000394767 ZBTB7CA1YPR0 619 aa26.28■■□□□ 1.8
CXXC4-201ENST00000394767 NUTM2DQ5VT03 806 aaPredicted RBP26.28■■□□□ 1.8
CXXC4-201ENST00000394767 FAM9BQ8IZU0 186 aa26.27■■□□□ 1.8
CXXC4-201ENST00000394767 RAPGEF3O95398 923 aa26.25■■□□□ 1.79
CXXC4-201ENST00000394767 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
CXXC4-201ENST00000394767 EID1Q9Y6B2 187 aa26.24■■□□□ 1.79
CXXC4-201ENST00000394767 EHBP1L1Q8N3D4 1523 aa26.22■■□□□ 1.79
CXXC4-201ENST00000394767 LMOD2Q6P5Q4 547 aa26.21■■□□□ 1.79
CXXC4-201ENST00000394767 HAP1P54257 671 aaPredicted RBP26.2■■□□□ 1.78
CXXC4-201ENST00000394767 KNSTRNQ9Y448 316 aa26.19■■□□□ 1.78
CXXC4-201ENST00000394767 L3MBTL2Q969R5 705 aa26.19■■□□□ 1.78
CXXC4-201ENST00000394767 SALL2Q9Y467 1007 aaPredicted RBP26.18■■□□□ 1.78
CXXC4-201ENST00000394767 MRS2Q9HD23 443 aa26.17■■□□□ 1.78
CXXC4-201ENST00000394767 SCAPERQ9BY12 1400 aa26.16■■□□□ 1.78
CXXC4-201ENST00000394767 SRPK2P78362 688 aaKnown RBP26.16■■□□□ 1.78
CXXC4-201ENST00000394767 WDR43Q15061 677 aaKnown RBP eCLIP26.16■■□□□ 1.78
CXXC4-201ENST00000394767 TIAM1Q13009 1591 aa26.16■■□□□ 1.78
CXXC4-201ENST00000394767 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
CXXC4-201ENST00000394767 TMF1P82094 1093 aa26.15■■□□□ 1.78
CXXC4-201ENST00000394767 ANKRD50Q9ULJ7 1429 aa26.15■■□□□ 1.78
CXXC4-201ENST00000394767 CCDC144AA2RUR9 1427 aa26.14■■□□□ 1.78
CXXC4-201ENST00000394767 CD109Q6YHK3 1445 aa26.13■■□□□ 1.77
CXXC4-201ENST00000394767 PCF11O94913 1555 aaKnown RBP26.13■■□□□ 1.77
CXXC4-201ENST00000394767 CANXP27824 592 aaKnown RBP26.11■■□□□ 1.77
CXXC4-201ENST00000394767 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
CXXC4-201ENST00000394767 ARHGEF11O15085 1522 aa26.1■■□□□ 1.77
CXXC4-201ENST00000394767 PLEKHH2Q8IVE3 1493 aa26.1■■□□□ 1.77
CXXC4-201ENST00000394767 ROCK2O75116 1388 aaKnown RBP26.1■■□□□ 1.77
CXXC4-201ENST00000394767 HNRNPUQ00839 825 aaKnown RBP eCLIP26.1■■□□□ 1.77
CXXC4-201ENST00000394767 PPM1GO15355 546 aaPredicted RBP26.09■■□□□ 1.77
CXXC4-201ENST00000394767 HSPA5P11021 654 aaKnown RBP26.05■■□□□ 1.76
CXXC4-201ENST00000394767 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
CXXC4-201ENST00000394767 C9orf84Q5VXU9 1444 aa26.04■■□□□ 1.76
CXXC4-201ENST00000394767 VGFO15240 615 aaPredicted RBP26.01■■□□□ 1.75
CXXC4-201ENST00000394767 RRBP1Q9P2E9 1410 aaKnown RBP26■■□□□ 1.75
CXXC4-201ENST00000394767 SUPT6HQ7KZ85 1726 aaKnown RBP26■■□□□ 1.75
CXXC4-201ENST00000394767 TNNT2P45379 298 aaPredicted RBP26■■□□□ 1.75
CXXC4-201ENST00000394767 MIER1Q8N108 512 aa26■■□□□ 1.75
CXXC4-201ENST00000394767 A0A0G2JS52 829 aa25.99■■□□□ 1.75
CXXC4-201ENST00000394767 NUP160Q12769 1436 aa25.98■■□□□ 1.75
CXXC4-201ENST00000394767 CFAP53Q96M91 514 aa25.97■■□□□ 1.75
CXXC4-201ENST00000394767 TRAK1Q9UPV9 953 aa25.96■■□□□ 1.75
CXXC4-201ENST00000394767 CC2D1BQ5T0F9 858 aaKnown RBP25.95■■□□□ 1.74
CXXC4-201ENST00000394767 ABCA5Q8WWZ7 1642 aa25.94■■□□□ 1.74
CXXC4-201ENST00000394767 SOX12O15370 315 aa25.92■■□□□ 1.74
CXXC4-201ENST00000394767 ERICH6Q7L0X2 663 aa25.92■■□□□ 1.74
CXXC4-201ENST00000394767 UGGT2Q9NYU1 1516 aa25.92■■□□□ 1.74
CXXC4-201ENST00000394767 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
CXXC4-201ENST00000394767 ATP10BO94823 1461 aa25.92■■□□□ 1.74
CXXC4-201ENST00000394767 TARBP1Q13395 1621 aaKnown RBP25.91■■□□□ 1.74
CXXC4-201ENST00000394767 AEBP2Q6ZN18 517 aaPredicted RBP25.91■■□□□ 1.74
CXXC4-201ENST00000394767 KIF14Q15058 1648 aa25.91■■□□□ 1.74
CXXC4-201ENST00000394767 DAPK1P53355 1430 aa25.9■■□□□ 1.74
CXXC4-201ENST00000394767 ASXL2Q76L83 1435 aa25.89■■□□□ 1.74
CXXC4-201ENST00000394767 ADGRL1O94910 1474 aa25.88■■□□□ 1.73
CXXC4-201ENST00000394767 BCL11AQ9H165 835 aa25.88■■□□□ 1.73
CXXC4-201ENST00000394767 EIF3AQ14152 1382 aaKnown RBP25.87■■□□□ 1.73
CXXC4-201ENST00000394767 NUTM2FA1L443 756 aa25.86■■□□□ 1.73
CXXC4-201ENST00000394767 ZBTB47Q9UFB7 747 aaPredicted RBP25.86■■□□□ 1.73
CXXC4-201ENST00000394767 HDGFL2Q7Z4V5 671 aaPredicted RBP25.86■■□□□ 1.73
CXXC4-201ENST00000394767 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
CXXC4-201ENST00000394767 RAPGEF6Q8TEU7 1601 aa25.85■■□□□ 1.73
CXXC4-201ENST00000394767 KIAA0556O60303 1618 aa25.84■■□□□ 1.73
CXXC4-201ENST00000394767 PAK3O75914 559 aaPredicted RBP25.84■■□□□ 1.73
CXXC4-201ENST00000394767 NUP153P49790 1475 aaKnown RBP25.83■■□□□ 1.73
CXXC4-201ENST00000394767 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
CXXC4-201ENST00000394767 CCDC141Q6ZP82 1450 aa25.82■■□□□ 1.72
CXXC4-201ENST00000394767 FANCAO15360 1455 aa25.81■■□□□ 1.72
CXXC4-201ENST00000394767 SENP3-EIF4A1A0A087X0R7 540 aa25.81■■□□□ 1.72
CXXC4-201ENST00000394767 MAP3K1Q13233 1512 aa25.81■■□□□ 1.72
CXXC4-201ENST00000394767 CAMSAP2Q08AD1 1489 aa25.8■■□□□ 1.72
CXXC4-201ENST00000394767 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.8■■□□□ 1.72
CXXC4-201ENST00000394767 WDR97A6NE52 1622 aa25.8■■□□□ 1.72
CXXC4-201ENST00000394767 NUDCQ9Y266 331 aa25.78■■□□□ 1.72
CXXC4-201ENST00000394767 POGZQ7Z3K3 1410 aa25.78■■□□□ 1.72
CXXC4-201ENST00000394767 MORC1Q86VD1 984 aa25.78■■□□□ 1.72
CXXC4-201ENST00000394767 ST20-MTHFSA0A0A6YYL1 179 aa25.77■■□□□ 1.72
CXXC4-201ENST00000394767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.75■■□□□ 1.71
CXXC4-201ENST00000394767 HFM1A2PYH4 1435 aa25.75■■□□□ 1.71
CXXC4-201ENST00000394767 DENND4BO75064 1496 aaPredicted RBP25.75■■□□□ 1.71
CXXC4-201ENST00000394767 NGDNQ8NEJ9 315 aaKnown RBP25.74■■□□□ 1.71
CXXC4-201ENST00000394767 U2SURPO15042 1029 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms