RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 AKNAQ7Z591 1439 aa30.01■■■□□ 2.39
TRPT1-203ENST00000394547 ARHGAP5Q13017 1502 aa30■■■□□ 2.39
TRPT1-203ENST00000394547 SENP3Q9H4L4 574 aaPredicted RBP29.99■■■□□ 2.39
TRPT1-203ENST00000394547 EFCAB2Q5VUJ9 269 aa29.96■■■□□ 2.39
TRPT1-203ENST00000394547 ITSN2Q9NZM3 1697 aa29.95■■■□□ 2.39
TRPT1-203ENST00000394547 APLP2Q06481 763 aa29.95■■■□□ 2.39
TRPT1-203ENST00000394547 GPATCH8Q9UKJ3 1502 aaKnown RBP29.95■■■□□ 2.38
TRPT1-203ENST00000394547 ADGRL1O94910 1474 aa29.93■■■□□ 2.38
TRPT1-203ENST00000394547 CCNB3Q8WWL7 1395 aa29.92■■■□□ 2.38
TRPT1-203ENST00000394547 DENND4BO75064 1496 aaPredicted RBP29.92■■■□□ 2.38
TRPT1-203ENST00000394547 RICTORQ6R327 1708 aa29.91■■■□□ 2.38
TRPT1-203ENST00000394547 NCOA2Q15596 1464 aa29.91■■■□□ 2.38
TRPT1-203ENST00000394547 FRMPD1Q5SYB0 1578 aa29.9■■■□□ 2.38
TRPT1-203ENST00000394547 ABCC1P33527 1531 aa29.86■■■□□ 2.37
TRPT1-203ENST00000394547 SCAPERQ9BY12 1400 aa29.85■■■□□ 2.37
TRPT1-203ENST00000394547 KANK4Q5T7N3 995 aaPredicted RBP29.84■■■□□ 2.37
TRPT1-203ENST00000394547 POGZQ7Z3K3 1410 aa29.84■■■□□ 2.37
TRPT1-203ENST00000394547 ZMYM4Q5VZL5 1548 aa29.83■■■□□ 2.37
TRPT1-203ENST00000394547 SAMD9LQ8IVG5 1584 aa29.82■■■□□ 2.36
TRPT1-203ENST00000394547 RAPGEF3O95398 923 aa29.81■■■□□ 2.36
TRPT1-203ENST00000394547 CFDP1Q9UEE9 299 aaPredicted RBP29.8■■■□□ 2.36
TRPT1-203ENST00000394547 PLEKHH2Q8IVE3 1493 aa29.8■■■□□ 2.36
TRPT1-203ENST00000394547 ZNF518AQ6AHZ1 1483 aa29.79■■■□□ 2.36
TRPT1-203ENST00000394547 KDM5CP41229 1560 aa29.76■■■□□ 2.35
TRPT1-203ENST00000394547 MAGI2Q86UL8 1455 aa29.75■■■□□ 2.35
TRPT1-203ENST00000394547 KIAA1107Q9UPP5 1409 aa29.75■■■□□ 2.35
TRPT1-203ENST00000394547 ARHGEF12Q9NZN5 1544 aa29.73■■■□□ 2.35
TRPT1-203ENST00000394547 ARHGEF40Q8TER5 1519 aa29.72■■■□□ 2.35
TRPT1-203ENST00000394547 SYCP2Q9BX26 1530 aa29.72■■■□□ 2.35
TRPT1-203ENST00000394547 PHF23Q9BUL5 403 aaPredicted RBP29.72■■■□□ 2.35
TRPT1-203ENST00000394547 MYOM3Q5VTT5 1437 aa29.71■■■□□ 2.35
TRPT1-203ENST00000394547 ZNF777Q9ULD5 760 aaPredicted RBP29.7■■■□□ 2.35
TRPT1-203ENST00000394547 MIA2Q96PC5 1412 aa29.69■■■□□ 2.34
TRPT1-203ENST00000394547 ZFYVE16Q7Z3T8 1539 aa29.68■■■□□ 2.34
TRPT1-203ENST00000394547 HECW2Q9P2P5 1572 aa29.67■■■□□ 2.34
TRPT1-203ENST00000394547 TRAPPC8Q9Y2L5 1435 aa29.66■■■□□ 2.34
TRPT1-203ENST00000394547 CAMSAP2Q08AD1 1489 aa29.66■■■□□ 2.34
TRPT1-203ENST00000394547 MLH3Q9UHC1 1453 aa29.64■■■□□ 2.34
TRPT1-203ENST00000394547 AFAP1Q8N556 730 aa29.61■■■□□ 2.33
TRPT1-203ENST00000394547 MBD5Q9P267 1494 aa29.61■■■□□ 2.33
TRPT1-203ENST00000394547 HNRNPMP52272 730 aaKnown RBP eCLIP29.58■■■□□ 2.33
TRPT1-203ENST00000394547 ARHGEF5Q12774 1597 aa29.58■■■□□ 2.33
TRPT1-203ENST00000394547 ZNF644Q9H582 1327 aaPredicted RBP29.58■■■□□ 2.33
TRPT1-203ENST00000394547 YEATS2Q9ULM3 1422 aa29.58■■■□□ 2.33
TRPT1-203ENST00000394547 KIDINS220Q9ULH0 1771 aa29.55■■■□□ 2.32
TRPT1-203ENST00000394547 INO80Q9ULG1 1556 aaPredicted RBP29.55■■■□□ 2.32
TRPT1-203ENST00000394547 CCDC141Q6ZP82 1450 aa29.55■■■□□ 2.32
TRPT1-203ENST00000394547 FGD6Q6ZV73 1430 aa29.54■■■□□ 2.32
TRPT1-203ENST00000394547 PTPN23Q9H3S7 1636 aa29.54■■■□□ 2.32
TRPT1-203ENST00000394547 RSPH4AQ5TD94 716 aa29.54■■■□□ 2.32
TRPT1-203ENST00000394547 DIP2CQ9Y2E4 1556 aa29.53■■■□□ 2.32
TRPT1-203ENST00000394547 ATP10AO60312 1499 aa29.53■■■□□ 2.32
TRPT1-203ENST00000394547 ABCA6Q8N139 1617 aa29.53■■■□□ 2.32
TRPT1-203ENST00000394547 REREQ9P2R6 1566 aa29.52■■■□□ 2.32
TRPT1-203ENST00000394547 ATP7AQ04656 1500 aa29.51■■■□□ 2.32
TRPT1-203ENST00000394547 C9orf84Q5VXU9 1444 aa29.51■■■□□ 2.31
TRPT1-203ENST00000394547 TCOF1Q13428 1488 aaKnown RBP29.5■■■□□ 2.31
TRPT1-203ENST00000394547 SPAG9O60271 1321 aaKnown RBP29.49■■■□□ 2.31
TRPT1-203ENST00000394547 RTEL1-TNFRSF6BF6WH68 1400 aa29.47■■■□□ 2.31
TRPT1-203ENST00000394547 MYT1LQ9UL68 1186 aa29.46■■■□□ 2.31
TRPT1-203ENST00000394547 SIGLEC1Q9BZZ2 1709 aa29.44■■■□□ 2.3
TRPT1-203ENST00000394547 MAST1Q9Y2H9 1570 aa29.43■■■□□ 2.3
TRPT1-203ENST00000394547 BCORL1Q5H9F3 1711 aa29.42■■■□□ 2.3
TRPT1-203ENST00000394547 ADGBQ8N7X0 1667 aa29.41■■■□□ 2.3
TRPT1-203ENST00000394547 CROCC2H7BZ55 1655 aa29.4■■■□□ 2.3
TRPT1-203ENST00000394547 DNMT1P26358 1616 aaKnown RBP29.39■■■□□ 2.3
TRPT1-203ENST00000394547 AGLP35573 1532 aa29.39■■■□□ 2.3
TRPT1-203ENST00000394547 SHANK2Q9UPX8 1470 aa29.37■■■□□ 2.29
TRPT1-203ENST00000394547 KDM4FA0A1W2PPD8 638 aa29.37■■■□□ 2.29
TRPT1-203ENST00000394547 TSPY4P0CV99 314 aa29.37■■■□□ 2.29
TRPT1-203ENST00000394547 TSPY10P0CW01 314 aa29.37■■■□□ 2.29
TRPT1-203ENST00000394547 ADAMTSL3P82987 1691 aa29.37■■■□□ 2.29
TRPT1-203ENST00000394547 PLXNC1O60486 1568 aa29.36■■■□□ 2.29
TRPT1-203ENST00000394547 ARID4BQ4LE39 1312 aaPredicted RBP29.36■■■□□ 2.29
TRPT1-203ENST00000394547 A2MP01023 1474 aa29.32■■■□□ 2.28
TRPT1-203ENST00000394547 DAPK1P53355 1430 aa29.32■■■□□ 2.28
TRPT1-203ENST00000394547 ABCC5O15440 1437 aa29.31■■■□□ 2.28
TRPT1-203ENST00000394547 PPARGC1BQ86YN6 1023 aaKnown RBP29.3■■■□□ 2.28
TRPT1-203ENST00000394547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.27■■■□□ 2.28
TRPT1-203ENST00000394547 MADDQ8WXG6 1647 aa29.26■■■□□ 2.27
TRPT1-203ENST00000394547 DHX29Q7Z478 1369 aaKnown RBP29.24■■■□□ 2.27
TRPT1-203ENST00000394547 RRBP1Q9P2E9 1410 aaKnown RBP29.23■■■□□ 2.27
TRPT1-203ENST00000394547 FAM50AQ14320 339 aaKnown RBP29.23■■■□□ 2.27
TRPT1-203ENST00000394547 FER1L4A9Z1Z3 1794 aa29.23■■■□□ 2.27
TRPT1-203ENST00000394547 ADGRL2O95490 1459 aa29.18■■■□□ 2.26
TRPT1-203ENST00000394547 EIF2AK4Q9P2K8 1649 aaKnown RBP29.18■■■□□ 2.26
TRPT1-203ENST00000394547 RIMS1Q86UR5 1692 aaKnown RBP29.18■■■□□ 2.26
TRPT1-203ENST00000394547 DUOX2Q9NRD8 1548 aa29.17■■■□□ 2.26
TRPT1-203ENST00000394547 MLECQ14165 292 aa29.15■■■□□ 2.26
TRPT1-203ENST00000394547 ANKRD30AQ9BXX3 1397 aa29.14■■■□□ 2.26
TRPT1-203ENST00000394547 PTPRMP28827 1452 aa29.14■■■□□ 2.26
TRPT1-203ENST00000394547 KIF15Q9NS87 1388 aa29.13■■■□□ 2.25
TRPT1-203ENST00000394547 NCOA1Q15788 1441 aa29.11■■■□□ 2.25
TRPT1-203ENST00000394547 ERBINQ96RT1 1412 aa29.11■■■□□ 2.25
TRPT1-203ENST00000394547 FAM135AQ9P2D6 1515 aa29.1■■■□□ 2.25
TRPT1-203ENST00000394547 CNTLNQ9NXG0 1405 aa29.09■■■□□ 2.25
TRPT1-203ENST00000394547 RNF17Q9BXT8 1623 aaKnown RBP29.09■■■□□ 2.25
TRPT1-203ENST00000394547 MROH2AA6NES4 1674 aa29.07■■■□□ 2.24
TRPT1-203ENST00000394547 PPP6R1Q9UPN7 881 aa29.07■■■□□ 2.24
TRPT1-203ENST00000394547 PTPRKQ15262 1439 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms