RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 POLA1P09884 1462 aaPredicted RBP10.56□□□□□ -0.72
NUP58-204ENST00000394327 DNAJC5Q9H3Z4 198 aa10.55□□□□□ -0.72
NUP58-204ENST00000394327 BBXQ8WY36 941 aaPredicted RBP10.54□□□□□ -0.72
NUP58-204ENST00000394327 STK24Q9Y6E0 443 aa10.53□□□□□ -0.72
NUP58-204ENST00000394327 TARBP1Q13395 1621 aaKnown RBP10.53□□□□□ -0.72
NUP58-204ENST00000394327 IFT140Q96RY7 1462 aa10.52□□□□□ -0.73
NUP58-204ENST00000394327 BMP2KQ9NSY1 1161 aaPredicted RBP10.51□□□□□ -0.73
NUP58-204ENST00000394327 SOGA1O94964 1423 aa10.5□□□□□ -0.73
NUP58-204ENST00000394327 ABCA10Q8WWZ4 1543 aa10.49□□□□□ -0.73
NUP58-204ENST00000394327 TTLL13PA6NNM8 815 aa10.49□□□□□ -0.73
NUP58-204ENST00000394327 TMEM106CQ9BVX2 250 aa10.49□□□□□ -0.73
NUP58-204ENST00000394327 TAOK2Q9UL54 1235 aa10.48□□□□□ -0.73
NUP58-204ENST00000394327 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
NUP58-204ENST00000394327 RAD54L2Q9Y4B4 1467 aa10.46□□□□□ -0.73
NUP58-204ENST00000394327 PBRM1Q86U86 1689 aa10.46□□□□□ -0.73
NUP58-204ENST00000394327 ABCA5Q8WWZ7 1642 aa10.46□□□□□ -0.73
NUP58-204ENST00000394327 TIE1P35590 1138 aa10.46□□□□□ -0.74
NUP58-204ENST00000394327 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.74
NUP58-204ENST00000394327 GTPBP6O43824 516 aaPredicted RBP10.45□□□□□ -0.74
NUP58-204ENST00000394327 EFCAB3Q8N7B9 438 aa10.45□□□□□ -0.74
NUP58-204ENST00000394327 CABP2Q9NPB3 220 aa10.45□□□□□ -0.74
NUP58-204ENST00000394327 ATN1P54259 1190 aaPredicted RBP10.44□□□□□ -0.74
NUP58-204ENST00000394327 ATMINO43313 823 aaPredicted RBP10.43□□□□□ -0.74
NUP58-204ENST00000394327 PAXIP1Q6ZW49 1069 aaPredicted RBP10.43□□□□□ -0.74
NUP58-204ENST00000394327 PELP1Q8IZL8 1130 aaKnown RBP10.43□□□□□ -0.74
NUP58-204ENST00000394327 MFRPQ9BY79 579 aa10.42□□□□□ -0.74
NUP58-204ENST00000394327 KIF27Q86VH2 1401 aa10.42□□□□□ -0.74
NUP58-204ENST00000394327 EEA1Q15075 1411 aa10.41□□□□□ -0.74
NUP58-204ENST00000394327 ASTLQ6HA08 431 aaPredicted RBP10.41□□□□□ -0.74
NUP58-204ENST00000394327 ZNF608Q9ULD9 1512 aaPredicted RBP10.41□□□□□ -0.74
NUP58-204ENST00000394327 GAPVD1Q14C86 1478 aa10.4□□□□□ -0.74
NUP58-204ENST00000394327 CFAP44Q96MT7 982 aa10.4□□□□□ -0.75
NUP58-204ENST00000394327 CUL7Q14999 1698 aa10.39□□□□□ -0.75
NUP58-204ENST00000394327 ERICH3Q5RHP9 1530 aa10.39□□□□□ -0.75
NUP58-204ENST00000394327 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
NUP58-204ENST00000394327 PHF8Q9UPP1 1060 aa10.39□□□□□ -0.75
NUP58-204ENST00000394327 POTEB2H3BUK9 544 aa10.38□□□□□ -0.75
NUP58-204ENST00000394327 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.38□□□□□ -0.75
NUP58-204ENST00000394327 TRIM35Q9UPQ4 493 aa10.38□□□□□ -0.75
NUP58-204ENST00000394327 GRIN2BQ13224 1484 aa10.37□□□□□ -0.75
NUP58-204ENST00000394327 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
NUP58-204ENST00000394327 SPRYD3Q8NCJ5 442 aa10.37□□□□□ -0.75
NUP58-204ENST00000394327 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
NUP58-204ENST00000394327 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.753e-7■■■■□ 21.1
NUP58-204ENST00000394327 PPP1R37O75864 691 aa10.35□□□□□ -0.75
NUP58-204ENST00000394327 MAGI1Q96QZ7 1491 aaPredicted RBP10.35□□□□□ -0.75
NUP58-204ENST00000394327 ILDR1Q86SU0 546 aaPredicted RBP10.34□□□□□ -0.75
NUP58-204ENST00000394327 ADAMTS12P58397 1594 aa10.34□□□□□ -0.75
NUP58-204ENST00000394327 TSHZ2Q9NRE2 1034 aa10.33□□□□□ -0.76
NUP58-204ENST00000394327 RUSC2Q8N2Y8 1516 aa10.33□□□□□ -0.76
NUP58-204ENST00000394327 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
NUP58-204ENST00000394327 CHD1O14646 1710 aa10.32□□□□□ -0.76
NUP58-204ENST00000394327 SOX12O15370 315 aa10.32□□□□□ -0.76
NUP58-204ENST00000394327 POTEFA5A3E0 1075 aa10.31□□□□□ -0.76
NUP58-204ENST00000394327 SLC24A1O60721 1099 aa10.31□□□□□ -0.76
NUP58-204ENST00000394327 KIF21BO75037 1637 aa10.31□□□□□ -0.76
NUP58-204ENST00000394327 DPY19L2Q6NUT2 758 aa10.3□□□□□ -0.76
NUP58-204ENST00000394327 IGF1RP08069 1367 aa10.3□□□□□ -0.76
NUP58-204ENST00000394327 MAMSTRQ6ZN01 415 aa10.29□□□□□ -0.76
NUP58-204ENST00000394327 FAM163AQ96GL9 167 aaPredicted RBP10.29□□□□□ -0.76
NUP58-204ENST00000394327 FHAD1B1AJZ9 1412 aa10.29□□□□□ -0.76
NUP58-204ENST00000394327 SYNJ2O15056 1496 aa10.29□□□□□ -0.76
NUP58-204ENST00000394327 IRX5P78411 483 aaPredicted RBP10.28□□□□□ -0.76
NUP58-204ENST00000394327 HAP1P54257 671 aaPredicted RBP10.27□□□□□ -0.77
NUP58-204ENST00000394327 MKRN3Q13064 507 aaKnown RBP10.27□□□□□ -0.77
NUP58-204ENST00000394327 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.77
NUP58-204ENST00000394327 COLQQ9Y215 455 aaPredicted RBP10.27□□□□□ -0.77
NUP58-204ENST00000394327 CTTNBP2Q8WZ74 1663 aa10.26□□□□□ -0.77
NUP58-204ENST00000394327 PRXQ9BXM0 1461 aa10.26□□□□□ -0.77
NUP58-204ENST00000394327 CARMIL1Q5VZK9 1371 aa10.26□□□□□ -0.77
NUP58-204ENST00000394327 NLRP6P59044 892 aa10.26□□□□□ -0.77
NUP58-204ENST00000394327 RAPGEF2Q9Y4G8 1499 aa10.26□□□□□ -0.77
NUP58-204ENST00000394327 LCE2DQ5TA82 110 aaPredicted RBP10.25□□□□□ -0.77
NUP58-204ENST00000394327 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
NUP58-204ENST00000394327 FAM9AQ8IZU1 332 aaPredicted RBP10.24□□□□□ -0.77
NUP58-204ENST00000394327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.771e-6■■□□□ 14
NUP58-204ENST00000394327 KDM2AQ9Y2K7 1162 aa10.24□□□□□ -0.77
NUP58-204ENST00000394327 GRIN2AQ12879 1464 aa10.24□□□□□ -0.77
NUP58-204ENST00000394327 GOLGA2Q08379 1002 aa10.24□□□□□ -0.77
NUP58-204ENST00000394327 GOLGA3Q08378 1498 aa10.22□□□□□ -0.77
NUP58-204ENST00000394327 CDAN1Q8IWY9 1227 aa10.22□□□□□ -0.77
NUP58-204ENST00000394327 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
NUP58-204ENST00000394327 IER5LQ5T953 404 aa10.21□□□□□ -0.78
NUP58-204ENST00000394327 CEP170Q5SW79 1584 aa10.18□□□□□ -0.78
NUP58-204ENST00000394327 OCEL1Q9H607 264 aa10.18□□□□□ -0.78
NUP58-204ENST00000394327 METRNQ9UJH8 293 aa10.18□□□□□ -0.78
NUP58-204ENST00000394327 NUP160Q12769 1436 aa10.18□□□□□ -0.78
NUP58-204ENST00000394327 SLC39A7Q92504 469 aa10.17□□□□□ -0.78
NUP58-204ENST00000394327 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
NUP58-204ENST00000394327 IQGAP2Q13576 1575 aa10.16□□□□□ -0.78
NUP58-204ENST00000394327 C7P10643 843 aa10.16□□□□□ -0.78
NUP58-204ENST00000394327 CLASP1Q7Z460 1538 aa10.15□□□□□ -0.78
NUP58-204ENST00000394327 SCUBE2Q9NQ36 999 aa10.14□□□□□ -0.79
NUP58-204ENST00000394327 SHROOM2Q13796 1616 aa10.14□□□□□ -0.79
NUP58-204ENST00000394327 KIAA0586Q9BVV6 1533 aa10.14□□□□□ -0.79
NUP58-204ENST00000394327 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
NUP58-204ENST00000394327 PLCG2P16885 1265 aa10.12□□□□□ -0.79
NUP58-204ENST00000394327 UBTFP17480 764 aaKnown RBP10.11□□□□□ -0.79
NUP58-204ENST00000394327 TMEM121BQ9BXQ6 578 aaPredicted RBP10.11□□□□□ -0.79
NUP58-204ENST00000394327 TNIKQ9UKE5 1360 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms