RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
NUP58-204ENST00000394327 CHIC1Q5VXU3 224 aa20.72■□□□□ 0.91
NUP58-204ENST00000394327 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
NUP58-204ENST00000394327 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
NUP58-204ENST00000394327 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
NUP58-204ENST00000394327 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.27
NUP58-204ENST00000394327 FOXD1Q16676 465 aa16.75■□□□□ 0.27
NUP58-204ENST00000394327 MSH5O43196 834 aa16.3■□□□□ 0.2
NUP58-204ENST00000394327 PPP6R1Q9UPN7 881 aa16.19■□□□□ 0.18
NUP58-204ENST00000394327 ADRA2BP18089 450 aa16.12■□□□□ 0.17
NUP58-204ENST00000394327 PIAS4Q8N2W9 510 aaPredicted RBP15.61■□□□□ 0.09
NUP58-204ENST00000394327 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
NUP58-204ENST00000394327 NISCHQ9Y2I1 1504 aa14.74□□□□□ -0.05
NUP58-204ENST00000394327 KCNA4P22459 653 aa14.74□□□□□ -0.05
NUP58-204ENST00000394327 CACNB1Q02641 598 aaPredicted RBP14.67□□□□□ -0.06
NUP58-204ENST00000394327 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
NUP58-204ENST00000394327 SCAF1Q9H7N4 1312 aaKnown RBP14.47□□□□□ -0.09
NUP58-204ENST00000394327 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
NUP58-204ENST00000394327 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
NUP58-204ENST00000394327 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
NUP58-204ENST00000394327 DMRT2Q9Y5R5 561 aa14.28□□□□□ -0.12
NUP58-204ENST00000394327 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
NUP58-204ENST00000394327 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
NUP58-204ENST00000394327 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
NUP58-204ENST00000394327 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
NUP58-204ENST00000394327 POTEHQ6S545 545 aa13.74□□□□□ -0.21
NUP58-204ENST00000394327 EHMT2Q96KQ7 1210 aa13.71□□□□□ -0.22
NUP58-204ENST00000394327 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
NUP58-204ENST00000394327 ZBTB22O15209 634 aa13.64□□□□□ -0.23
NUP58-204ENST00000394327 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
NUP58-204ENST00000394327 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
NUP58-204ENST00000394327 DCAF8L1A6NGE4 600 aa13.56□□□□□ -0.24
NUP58-204ENST00000394327 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
NUP58-204ENST00000394327 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
NUP58-204ENST00000394327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.289e-7■□□□□ 10.5
NUP58-204ENST00000394327 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
NUP58-204ENST00000394327 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
NUP58-204ENST00000394327 CCDC180Q9P1Z9 1646 aa13.11□□□□□ -0.31
NUP58-204ENST00000394327 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
NUP58-204ENST00000394327 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
NUP58-204ENST00000394327 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
NUP58-204ENST00000394327 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
NUP58-204ENST00000394327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.83□□□□□ -0.36
NUP58-204ENST00000394327 HNRNPUL2Q1KMD3 747 aaKnown RBP12.83□□□□□ -0.36
NUP58-204ENST00000394327 CAPN15O75808 1086 aa12.63□□□□□ -0.39
NUP58-204ENST00000394327 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
NUP58-204ENST00000394327 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
NUP58-204ENST00000394327 APLP2Q06481 763 aa12.61□□□□□ -0.39
NUP58-204ENST00000394327 ABCB7O75027 752 aa12.5□□□□□ -0.41
NUP58-204ENST00000394327 DSG3P32926 999 aa12.5□□□□□ -0.41
NUP58-204ENST00000394327 POLA2Q14181 598 aa12.49□□□□□ -0.41
NUP58-204ENST00000394327 ABCC9O60706 1549 aa12.45□□□□□ -0.42
NUP58-204ENST00000394327 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
NUP58-204ENST00000394327 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
NUP58-204ENST00000394327 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
NUP58-204ENST00000394327 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
NUP58-204ENST00000394327 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
NUP58-204ENST00000394327 NACADO15069 1562 aa12.22□□□□□ -0.45
NUP58-204ENST00000394327 FKBP8Q14318 412 aa12.18□□□□□ -0.46
NUP58-204ENST00000394327 RB1CC1Q8TDY2 1594 aa12.18□□□□□ -0.46
NUP58-204ENST00000394327 FBLN2P98095 1184 aa12.15□□□□□ -0.46
NUP58-204ENST00000394327 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
NUP58-204ENST00000394327 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
NUP58-204ENST00000394327 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
NUP58-204ENST00000394327 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
NUP58-204ENST00000394327 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
NUP58-204ENST00000394327 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
NUP58-204ENST00000394327 UNC13AQ9UPW8 1703 aa11.98□□□□□ -0.49
NUP58-204ENST00000394327 PROM2Q8N271 834 aa11.94□□□□□ -0.5
NUP58-204ENST00000394327 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
NUP58-204ENST00000394327 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
NUP58-204ENST00000394327 SPDYE2BA6NHP3 402 aa11.89□□□□□ -0.51
NUP58-204ENST00000394327 SPDYE6P0CI01 402 aa11.89□□□□□ -0.51
NUP58-204ENST00000394327 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
NUP58-204ENST00000394327 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
NUP58-204ENST00000394327 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
NUP58-204ENST00000394327 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
NUP58-204ENST00000394327 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
NUP58-204ENST00000394327 HAX1O00165 279 aa11.72□□□□□ -0.53
NUP58-204ENST00000394327 SHROOM4Q9ULL8 1493 aa11.72□□□□□ -0.53
NUP58-204ENST00000394327 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
NUP58-204ENST00000394327 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
NUP58-204ENST00000394327 LHX8Q68G74 356 aa11.56□□□□□ -0.56
NUP58-204ENST00000394327 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
NUP58-204ENST00000394327 PIP4P2Q8N4L2 257 aa11.55□□□□□ -0.56
NUP58-204ENST00000394327 VASPP50552 380 aaPredicted RBP11.54□□□□□ -0.56
NUP58-204ENST00000394327 PITPNM1O00562 1244 aa11.52□□□□□ -0.56
NUP58-204ENST00000394327 SPDYE1Q8NFV5 336 aaPredicted RBP11.49□□□□□ -0.57
NUP58-204ENST00000394327 IFNLR1Q8IU57 520 aaPredicted RBP11.47□□□□□ -0.57
NUP58-204ENST00000394327 CLEC11AQ9Y240 323 aa11.47□□□□□ -0.57
NUP58-204ENST00000394327 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
NUP58-204ENST00000394327 BAZ1AQ9NRL2 1556 aaPredicted RBP11.44□□□□□ -0.58
NUP58-204ENST00000394327 EIF4G1Q04637 1599 aaKnown RBP11.44□□□□□ -0.58
NUP58-204ENST00000394327 SMARCA4P51532 1647 aa11.43□□□□□ -0.58
NUP58-204ENST00000394327 CECR2Q9BXF3 1484 aa11.39□□□□□ -0.59
NUP58-204ENST00000394327 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
NUP58-204ENST00000394327 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
NUP58-204ENST00000394327 MIER1Q8N108 512 aa11.35□□□□□ -0.59
NUP58-204ENST00000394327 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
NUP58-204ENST00000394327 CC2D2AQ9P2K1 1620 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms