RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 KCNH8Q96L42 1107 aa29.14■■■□□ 2.25
RAB5C-202ENST00000393860 RRP7BPQ9NSQ0 103 aa29.12■■■□□ 2.25
RAB5C-202ENST00000393860 ABCC5O15440 1437 aa29.12■■■□□ 2.25
RAB5C-202ENST00000393860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.12■■■□□ 2.25
RAB5C-202ENST00000393860 NAIPQ13075 1403 aa29.12■■■□□ 2.25
RAB5C-202ENST00000393860 PREX2Q70Z35 1606 aa29.09■■■□□ 2.25
RAB5C-202ENST00000393860 CDC42BPBQ9Y5S2 1711 aa29.09■■■□□ 2.25
RAB5C-202ENST00000393860 GCC2Q8IWJ2 1684 aa29.07■■■□□ 2.24
RAB5C-202ENST00000393860 MYO5CQ9NQX4 1742 aa29.03■■■□□ 2.24
RAB5C-202ENST00000393860 CROCC2H7BZ55 1655 aa29.01■■■□□ 2.24
RAB5C-202ENST00000393860 KDM6BO15054 1643 aa29.01■■■□□ 2.23
RAB5C-202ENST00000393860 SAMD9LQ8IVG5 1584 aa29.01■■■□□ 2.23
RAB5C-202ENST00000393860 ARHGAP5Q13017 1502 aa29■■■□□ 2.23
RAB5C-202ENST00000393860 AKNAQ7Z591 1439 aa29■■■□□ 2.23
RAB5C-202ENST00000393860 MAPKBP1O60336 1514 aa28.99■■■□□ 2.23
RAB5C-202ENST00000393860 WDR7Q9Y4E6 1490 aa28.98■■■□□ 2.23
RAB5C-202ENST00000393860 CLSPNQ9HAW4 1339 aa28.98■■■□□ 2.23
RAB5C-202ENST00000393860 ADGBQ8N7X0 1667 aa28.95■■■□□ 2.23
RAB5C-202ENST00000393860 ROCK1Q13464 1354 aa28.95■■■□□ 2.22
RAB5C-202ENST00000393860 HNRNPMP52272 730 aaKnown RBP eCLIP28.94■■■□□ 2.22
RAB5C-202ENST00000393860 ASXL2Q76L83 1435 aa28.93■■■□□ 2.22
RAB5C-202ENST00000393860 NPM1P06748 294 aaKnown RBP eCLIP28.89■■■□□ 2.22
RAB5C-202ENST00000393860 RIMBP3CA6NJZ7 1639 aa28.89■■■□□ 2.22
RAB5C-202ENST00000393860 RIMBP3BA6NNM3 1639 aa28.89■■■□□ 2.22
RAB5C-202ENST00000393860 RIMBP3Q9UFD9 1639 aa28.89■■■□□ 2.22
RAB5C-202ENST00000393860 SYCP2Q9BX26 1530 aa28.88■■■□□ 2.21
RAB5C-202ENST00000393860 ARHGEF5Q12774 1597 aa28.88■■■□□ 2.21
RAB5C-202ENST00000393860 MBD5Q9P267 1494 aa28.88■■■□□ 2.21
RAB5C-202ENST00000393860 PLCH2O75038 1416 aa28.87■■■□□ 2.21
RAB5C-202ENST00000393860 ADGRL2O95490 1459 aa28.86■■■□□ 2.21
RAB5C-202ENST00000393860 C9orf84Q5VXU9 1444 aa28.85■■■□□ 2.21
RAB5C-202ENST00000393860 NCOA1Q15788 1441 aa28.85■■■□□ 2.21
RAB5C-202ENST00000393860 SHANK2Q9UPX8 1470 aa28.84■■■□□ 2.21
RAB5C-202ENST00000393860 TRIM52Q96A61 297 aa28.83■■■□□ 2.21
RAB5C-202ENST00000393860 CCDC141Q6ZP82 1450 aa28.83■■■□□ 2.21
RAB5C-202ENST00000393860 CYB5RLQ6IPT4 315 aa28.81■■■□□ 2.2
RAB5C-202ENST00000393860 ANKRD30AQ9BXX3 1397 aa28.81■■■□□ 2.2
RAB5C-202ENST00000393860 ABCA9Q8IUA7 1624 aa28.81■■■□□ 2.2
RAB5C-202ENST00000393860 TSPY4P0CV99 314 aa28.79■■■□□ 2.2
RAB5C-202ENST00000393860 TSPY10P0CW01 314 aa28.79■■■□□ 2.2
RAB5C-202ENST00000393860 EFCAB2Q5VUJ9 269 aa28.78■■■□□ 2.2
RAB5C-202ENST00000393860 SIN3AQ96ST3 1273 aa28.78■■■□□ 2.2
RAB5C-202ENST00000393860 ARHGEF12Q9NZN5 1544 aa28.77■■■□□ 2.2
RAB5C-202ENST00000393860 PLEKHH2Q8IVE3 1493 aa28.76■■■□□ 2.19
RAB5C-202ENST00000393860 ABCC1P33527 1531 aa28.74■■■□□ 2.19
RAB5C-202ENST00000393860 NEUROD1Q13562 356 aa28.73■■■□□ 2.19
RAB5C-202ENST00000393860 KIAA1107Q9UPP5 1409 aa28.73■■■□□ 2.19
RAB5C-202ENST00000393860 ARAP3Q8WWN8 1544 aa28.72■■■□□ 2.19
RAB5C-202ENST00000393860 DENND4BO75064 1496 aaPredicted RBP28.7■■■□□ 2.19
RAB5C-202ENST00000393860 RSPH4AQ5TD94 716 aa28.7■■■□□ 2.18
RAB5C-202ENST00000393860 KIF15Q9NS87 1388 aa28.69■■■□□ 2.18
RAB5C-202ENST00000393860 ANKRD50Q9ULJ7 1429 aa28.68■■■□□ 2.18
RAB5C-202ENST00000393860 FANCAO15360 1455 aa28.68■■■□□ 2.18
RAB5C-202ENST00000393860 MAST1Q9Y2H9 1570 aa28.67■■■□□ 2.18
RAB5C-202ENST00000393860 MPHOSPH9Q99550 1183 aa28.66■■■□□ 2.18
RAB5C-202ENST00000393860 TRAPPC8Q9Y2L5 1435 aa28.66■■■□□ 2.18
RAB5C-202ENST00000393860 FOXD1Q16676 465 aa28.61■■■□□ 2.17
RAB5C-202ENST00000393860 PZPP20742 1482 aa28.59■■■□□ 2.17
RAB5C-202ENST00000393860 CD109Q6YHK3 1445 aa28.58■■■□□ 2.17
RAB5C-202ENST00000393860 PLXNC1O60486 1568 aa28.57■■■□□ 2.16
RAB5C-202ENST00000393860 ADGRL1O94910 1474 aa28.57■■■□□ 2.16
RAB5C-202ENST00000393860 SLC4A1APQ9BWU0 796 aaKnown RBP28.57■■■□□ 2.16
RAB5C-202ENST00000393860 AFAP1Q8N556 730 aa28.56■■■□□ 2.16
RAB5C-202ENST00000393860 ACIN1Q9UKV3 1341 aaKnown RBP28.55■■■□□ 2.16
RAB5C-202ENST00000393860 SCAPERQ9BY12 1400 aa28.53■■■□□ 2.16
RAB5C-202ENST00000393860 SPAG9O60271 1321 aaKnown RBP28.51■■■□□ 2.15
RAB5C-202ENST00000393860 ZFYVE16Q7Z3T8 1539 aa28.49■■■□□ 2.15
RAB5C-202ENST00000393860 NUP155O75694 1391 aa28.49■■■□□ 2.15
RAB5C-202ENST00000393860 ZNF316A6NFI3 1004 aaPredicted RBP28.47■■■□□ 2.15
RAB5C-202ENST00000393860 TONSLQ96HA7 1378 aa28.47■■■□□ 2.15
RAB5C-202ENST00000393860 CFAP74Q9C0B2 1584 aa28.47■■■□□ 2.15
RAB5C-202ENST00000393860 DUOX2Q9NRD8 1548 aa28.46■■■□□ 2.15
RAB5C-202ENST00000393860 KDM5DQ9BY66 1539 aa28.44■■■□□ 2.14
RAB5C-202ENST00000393860 INO80Q9ULG1 1556 aaPredicted RBP28.43■■■□□ 2.14
RAB5C-202ENST00000393860 ATP7AQ04656 1500 aa28.42■■■□□ 2.14
RAB5C-202ENST00000393860 ANKRD30BQ9BXX2 1392 aa28.42■■■□□ 2.14
RAB5C-202ENST00000393860 MAP3K4Q9Y6R4 1608 aa28.42■■■□□ 2.14
RAB5C-202ENST00000393860 RTEL1-TNFRSF6BF6WH68 1400 aa28.42■■■□□ 2.14
RAB5C-202ENST00000393860 PKD2Q13563 968 aa28.41■■■□□ 2.14
RAB5C-202ENST00000393860 MYT1LQ9UL68 1186 aa28.41■■■□□ 2.14
RAB5C-202ENST00000393860 TIMELESSQ9UNS1 1208 aa28.41■■■□□ 2.14
RAB5C-202ENST00000393860 UNC13BO14795 1591 aa28.4■■■□□ 2.14
RAB5C-202ENST00000393860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.38■■■□□ 2.138e-8■■□□□ 12.7
RAB5C-202ENST00000393860 ERBINQ96RT1 1412 aa28.38■■■□□ 2.13
RAB5C-202ENST00000393860 DIP2BQ9P265 1576 aa28.38■■■□□ 2.13
RAB5C-202ENST00000393860 GLI2P10070 1586 aa28.37■■■□□ 2.13
RAB5C-202ENST00000393860 FAM135AQ9P2D6 1515 aa28.36■■■□□ 2.13
RAB5C-202ENST00000393860 PPP1R15AO75807 674 aaPredicted RBP28.35■■■□□ 2.13
RAB5C-202ENST00000393860 FAM69CQ0P6D2 419 aa28.35■■■□□ 2.13
RAB5C-202ENST00000393860 ZNF518AQ6AHZ1 1483 aa28.35■■■□□ 2.13
RAB5C-202ENST00000393860 POGZQ7Z3K3 1410 aa28.33■■■□□ 2.13
RAB5C-202ENST00000393860 KIDINS220Q9ULH0 1771 aa28.33■■■□□ 2.13
RAB5C-202ENST00000393860 NEO1Q92859 1461 aa28.32■■■□□ 2.12
RAB5C-202ENST00000393860 RPRD2Q5VT52 1461 aaKnown RBP28.31■■■□□ 2.12
RAB5C-202ENST00000393860 TSPOAP1O95153 1857 aa28.29■■■□□ 2.12
RAB5C-202ENST00000393860 IQGAP3Q86VI3 1631 aa28.29■■■□□ 2.12
RAB5C-202ENST00000393860 KDM5CP41229 1560 aa28.28■■■□□ 2.12
RAB5C-202ENST00000393860 MAGI2Q86UL8 1455 aa28.27■■■□□ 2.12
RAB5C-202ENST00000393860 RAPGEF3O95398 923 aa28.25■■■□□ 2.11
RAB5C-202ENST00000393860 HECW2Q9P2P5 1572 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms