RNA–Protein interactions for RNA: ENST00000393356.5

CNOT6-202, Transcript of CCR4-NOT transcription complex subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT6, Length 6,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6-202ENST00000393356 FAM69CQ0P6D2 419 aa23.43■■□□□ 1.34
CNOT6-202ENST00000393356 FRAT1Q92837 279 aaPredicted RBP23.42■■□□□ 1.34
CNOT6-202ENST00000393356 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
CNOT6-202ENST00000393356 MORC1Q86VD1 984 aa23.41■■□□□ 1.34
CNOT6-202ENST00000393356 FMN1Q68DA7 1419 aa23.41■■□□□ 1.34
CNOT6-202ENST00000393356 NBR1Q14596 966 aa23.37■■□□□ 1.33
CNOT6-202ENST00000393356 PTPRGP23470 1445 aa23.36■■□□□ 1.33
CNOT6-202ENST00000393356 HDGFL2Q7Z4V5 671 aaPredicted RBP23.36■■□□□ 1.33
CNOT6-202ENST00000393356 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
CNOT6-202ENST00000393356 ANKRD30AQ9BXX3 1397 aa23.35■■□□□ 1.33
CNOT6-202ENST00000393356 OS9Q13438 667 aaPredicted RBP23.34■■□□□ 1.33
CNOT6-202ENST00000393356 MPHOSPH9Q99550 1183 aa23.34■■□□□ 1.33
CNOT6-202ENST00000393356 VPS8Q8N3P4 1428 aa23.32■■□□□ 1.32
CNOT6-202ENST00000393356 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
CNOT6-202ENST00000393356 CDK11BP21127 795 aaKnown RBP23.31■■□□□ 1.32
CNOT6-202ENST00000393356 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
CNOT6-202ENST00000393356 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.329e-7■■■■□ 25.8
CNOT6-202ENST00000393356 NGDNQ8NEJ9 315 aaKnown RBP23.29■■□□□ 1.32
CNOT6-202ENST00000393356 LTV1Q96GA3 475 aaPredicted RBP23.28■■□□□ 1.32
CNOT6-202ENST00000393356 RTF1Q92541 710 aaKnown RBP23.28■■□□□ 1.32
CNOT6-202ENST00000393356 GOLGA2Q08379 1002 aa23.27■■□□□ 1.32
CNOT6-202ENST00000393356 HSPA5P11021 654 aaKnown RBP23.26■■□□□ 1.31
CNOT6-202ENST00000393356 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
CNOT6-202ENST00000393356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.24■■□□□ 1.311e-6■■■■□ 21.1
CNOT6-202ENST00000393356 TRAK1Q9UPV9 953 aa23.23■■□□□ 1.31
CNOT6-202ENST00000393356 CCDC18Q5T9S5 1454 aa23.22■■□□□ 1.31
CNOT6-202ENST00000393356 FGD5Q6ZNL6 1462 aa23.22■■□□□ 1.31
CNOT6-202ENST00000393356 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
CNOT6-202ENST00000393356 EIF5BO60841 1220 aaKnown RBP23.21■■□□□ 1.31
CNOT6-202ENST00000393356 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
CNOT6-202ENST00000393356 PRDM2Q13029 1718 aa23.18■■□□□ 1.3
CNOT6-202ENST00000393356 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
CNOT6-202ENST00000393356 RAB3GAP2Q9H2M9 1393 aa23.16■■□□□ 1.3
CNOT6-202ENST00000393356 NESP48681 1621 aa23.16■■□□□ 1.3
CNOT6-202ENST00000393356 U2AF1L5P0DN76 240 aaPredicted RBP23.14■■□□□ 1.29
CNOT6-202ENST00000393356 U2AF1Q01081 240 aaKnown RBP eCLIP23.14■■□□□ 1.29
CNOT6-202ENST00000393356 MEX3CQ5U5Q3 659 aaKnown RBP23.12■■□□□ 1.29
CNOT6-202ENST00000393356 NAP1L2Q9ULW6 460 aaPredicted RBP23.12■■□□□ 1.29
CNOT6-202ENST00000393356 NCLP19338 710 aaKnown RBP23.11■■□□□ 1.29
CNOT6-202ENST00000393356 APBB1O00213 710 aa23.1■■□□□ 1.29
CNOT6-202ENST00000393356 RGS3P49796 1198 aa23.1■■□□□ 1.29
CNOT6-202ENST00000393356 CASC1Q6TDU7 716 aa23.1■■□□□ 1.29
CNOT6-202ENST00000393356 AMPHP49418 695 aa23.09■■□□□ 1.29
CNOT6-202ENST00000393356 ISY1Q9ULR0 285 aaKnown RBP23.09■■□□□ 1.29
CNOT6-202ENST00000393356 CC2D2AQ9P2K1 1620 aa23.07■■□□□ 1.28
CNOT6-202ENST00000393356 EVA1CP58658 441 aa23.06■■□□□ 1.28
CNOT6-202ENST00000393356 RSPH4AQ5TD94 716 aa23.05■■□□□ 1.28
CNOT6-202ENST00000393356 NCBP3Q53F19 620 aaKnown RBP23.02■■□□□ 1.28
CNOT6-202ENST00000393356 KCNJ4P48050 445 aa23.02■■□□□ 1.28
CNOT6-202ENST00000393356 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
CNOT6-202ENST00000393356 L3MBTL2Q969R5 705 aa23.01■■□□□ 1.27
CNOT6-202ENST00000393356 TERF2IPQ9NYB0 399 aa23.01■■□□□ 1.27
CNOT6-202ENST00000393356 EIF3AQ14152 1382 aaKnown RBP23.01■■□□□ 1.27
CNOT6-202ENST00000393356 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
CNOT6-202ENST00000393356 MSH5O43196 834 aa23■■□□□ 1.27
CNOT6-202ENST00000393356 CHMP3Q9Y3E7 222 aa23■■□□□ 1.27
CNOT6-202ENST00000393356 FGD1P98174 961 aa23■■□□□ 1.27
CNOT6-202ENST00000393356 CCDC146Q8IYE0 955 aa22.99■■□□□ 1.27
CNOT6-202ENST00000393356 ZNF644Q9H582 1327 aaPredicted RBP22.97■■□□□ 1.27
CNOT6-202ENST00000393356 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
CNOT6-202ENST00000393356 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
CNOT6-202ENST00000393356 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.95■■□□□ 1.26
CNOT6-202ENST00000393356 ZRSR1Q15695 479 aaKnown RBP22.94■■□□□ 1.26
CNOT6-202ENST00000393356 TMX4Q9H1E5 349 aaPredicted RBP22.94■■□□□ 1.26
CNOT6-202ENST00000393356 IGF1RP08069 1367 aa22.94■■□□□ 1.26
CNOT6-202ENST00000393356 CCDC144AA2RUR9 1427 aa22.92■■□□□ 1.26
CNOT6-202ENST00000393356 CLSTN1O94985 981 aa22.9■■□□□ 1.26
CNOT6-202ENST00000393356 BECN1Q14457 450 aa22.9■■□□□ 1.26
CNOT6-202ENST00000393356 SYTL4Q96C24 671 aaPredicted RBP22.9■■□□□ 1.26
CNOT6-202ENST00000393356 PSME1Q06323 249 aa22.89■■□□□ 1.26
CNOT6-202ENST00000393356 NCAPD3P42695 1498 aa22.89■■□□□ 1.25
CNOT6-202ENST00000393356 PRG4Q92954 1404 aaPredicted RBP22.88■■□□□ 1.25
CNOT6-202ENST00000393356 VGFO15240 615 aaPredicted RBP22.88■■□□□ 1.25
CNOT6-202ENST00000393356 G3V3G9 751 aa22.88■■□□□ 1.25
CNOT6-202ENST00000393356 DCAF8Q5TAQ9 597 aa22.88■■□□□ 1.25
CNOT6-202ENST00000393356 MRC2Q9UBG0 1479 aa22.87■■□□□ 1.25
CNOT6-202ENST00000393356 NUTM2GQ5VZR2 741 aa22.86■■□□□ 1.25
CNOT6-202ENST00000393356 SLC4A10Q6U841 1118 aa22.85■■□□□ 1.25
CNOT6-202ENST00000393356 GTF2E1P29083 439 aaPredicted RBP22.85■■□□□ 1.25
CNOT6-202ENST00000393356 TAF7LQ5H9L4 462 aa22.85■■□□□ 1.25
CNOT6-202ENST00000393356 AFAP1Q8N556 730 aa22.85■■□□□ 1.25
CNOT6-202ENST00000393356 MS4A1P11836 297 aa22.84■■□□□ 1.25
CNOT6-202ENST00000393356 B4GALNT3Q6L9W6 998 aa22.84■■□□□ 1.25
CNOT6-202ENST00000393356 KLHL34Q8N239 644 aa22.84■■□□□ 1.25
CNOT6-202ENST00000393356 RRP7AQ9Y3A4 280 aaKnown RBP22.84■■□□□ 1.25
CNOT6-202ENST00000393356 ATF3P18847 181 aa22.84■■□□□ 1.25
CNOT6-202ENST00000393356 NGEFQ8N5V2 710 aa22.83■■□□□ 1.25
CNOT6-202ENST00000393356 CHMP4BQ9H444 224 aaKnown RBP22.83■■□□□ 1.25
CNOT6-202ENST00000393356 ITPRIPQ8IWB1 547 aa22.83■■□□□ 1.25
CNOT6-202ENST00000393356 AMER1Q5JTC6 1135 aaPredicted RBP22.83■■□□□ 1.24
CNOT6-202ENST00000393356 GRIN2BQ13224 1484 aa22.82■■□□□ 1.24
CNOT6-202ENST00000393356 PLCB2Q00722 1185 aa22.81■■□□□ 1.24
CNOT6-202ENST00000393356 COG3Q96JB2 828 aa22.81■■□□□ 1.24
CNOT6-202ENST00000393356 ST20-MTHFSA0A0A6YYL1 179 aa22.81■■□□□ 1.24
CNOT6-202ENST00000393356 ARHGAP5Q13017 1502 aa22.8■■□□□ 1.24
CNOT6-202ENST00000393356 STK31Q9BXU1 1019 aa22.8■■□□□ 1.24
CNOT6-202ENST00000393356 GOLGA6L22H0YM25 854 aa22.79■■□□□ 1.24
CNOT6-202ENST00000393356 GORABQ5T7V8 394 aa22.78■■□□□ 1.24
CNOT6-202ENST00000393356 TIMELESSQ9UNS1 1208 aa22.77■■□□□ 1.24
CNOT6-202ENST00000393356 PANK3Q9H999 370 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms