RNA–Protein interactions for RNA: ENST00000393307.5

RAB43-204, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-204ENST00000393307 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
RAB43-204ENST00000393307 CARD11Q9BXL7 1154 aa17.68■□□□□ 0.42
RAB43-204ENST00000393307 AFAP1Q8N556 730 aa17.68■□□□□ 0.42
RAB43-204ENST00000393307 TIAM1Q13009 1591 aa17.66■□□□□ 0.42
RAB43-204ENST00000393307 PCF11O94913 1555 aaKnown RBP17.66■□□□□ 0.42
RAB43-204ENST00000393307 FAM69CQ0P6D2 419 aa17.65■□□□□ 0.42
RAB43-204ENST00000393307 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
RAB43-204ENST00000393307 L3MBTL2Q969R5 705 aa17.65■□□□□ 0.42
RAB43-204ENST00000393307 EPRSP07814 1512 aaKnown RBP17.64■□□□□ 0.41
RAB43-204ENST00000393307 PRKCSHP14314 528 aaPredicted RBP17.62■□□□□ 0.41
RAB43-204ENST00000393307 FAM9BQ8IZU0 186 aa17.62■□□□□ 0.41
RAB43-204ENST00000393307 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
RAB43-204ENST00000393307 PPP1R15AO75807 674 aaPredicted RBP17.61■□□□□ 0.41
RAB43-204ENST00000393307 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
RAB43-204ENST00000393307 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
RAB43-204ENST00000393307 WDR62O43379 1518 aa17.59■□□□□ 0.41
RAB43-204ENST00000393307 KANK1Q14678 1352 aa17.58■□□□□ 0.41
RAB43-204ENST00000393307 UACAQ9BZF9 1416 aa17.57■□□□□ 0.4
RAB43-204ENST00000393307 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
RAB43-204ENST00000393307 TIMELESSQ9UNS1 1208 aa17.56■□□□□ 0.4
RAB43-204ENST00000393307 EIF4G3O43432 1585 aaKnown RBP17.55■□□□□ 0.4
RAB43-204ENST00000393307 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
RAB43-204ENST00000393307 NUTM2DQ5VT03 806 aaPredicted RBP17.54■□□□□ 0.4
RAB43-204ENST00000393307 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
RAB43-204ENST00000393307 WASHC2CQ9Y4E1 1318 aa17.53■□□□□ 0.4
RAB43-204ENST00000393307 HECW1Q76N89 1606 aa17.53■□□□□ 0.4
RAB43-204ENST00000393307 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.4
RAB43-204ENST00000393307 TMC1Q8TDI8 760 aa17.52■□□□□ 0.4
RAB43-204ENST00000393307 MRS2Q9HD23 443 aa17.51■□□□□ 0.39
RAB43-204ENST00000393307 ADAMTS12P58397 1594 aa17.51■□□□□ 0.39
RAB43-204ENST00000393307 EHBP1L1Q8N3D4 1523 aa17.5■□□□□ 0.39
RAB43-204ENST00000393307 ARHGEF11O15085 1522 aa17.5■□□□□ 0.39
RAB43-204ENST00000393307 ARHGAP5Q13017 1502 aa17.49■□□□□ 0.39
RAB43-204ENST00000393307 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.39
RAB43-204ENST00000393307 RAPGEF3O95398 923 aa17.48■□□□□ 0.39
RAB43-204ENST00000393307 ANKRD50Q9ULJ7 1429 aa17.47■□□□□ 0.39
RAB43-204ENST00000393307 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
RAB43-204ENST00000393307 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
RAB43-204ENST00000393307 MSH5O43196 834 aa17.46■□□□□ 0.39
RAB43-204ENST00000393307 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
RAB43-204ENST00000393307 STK26Q9P289 416 aa17.44■□□□□ 0.38
RAB43-204ENST00000393307 MIA2Q96PC5 1412 aa17.43■□□□□ 0.38
RAB43-204ENST00000393307 THOC2Q8NI27 1593 aaKnown RBP17.43■□□□□ 0.38
RAB43-204ENST00000393307 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
RAB43-204ENST00000393307 SUPT6HQ7KZ85 1726 aaKnown RBP17.4■□□□□ 0.38
RAB43-204ENST00000393307 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
RAB43-204ENST00000393307 ATP10BO94823 1461 aa17.39■□□□□ 0.38
RAB43-204ENST00000393307 POGKQ9P215 609 aa17.39■□□□□ 0.37
RAB43-204ENST00000393307 C9orf84Q5VXU9 1444 aa17.39■□□□□ 0.37
RAB43-204ENST00000393307 DAPK1P53355 1430 aa17.38■□□□□ 0.37
RAB43-204ENST00000393307 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
RAB43-204ENST00000393307 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
RAB43-204ENST00000393307 CCDC144AA2RUR9 1427 aa17.37■□□□□ 0.37
RAB43-204ENST00000393307 NUP160Q12769 1436 aa17.37■□□□□ 0.37
RAB43-204ENST00000393307 NAIPQ13075 1403 aa17.37■□□□□ 0.37
RAB43-204ENST00000393307 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
RAB43-204ENST00000393307 ROCK2O75116 1388 aaKnown RBP17.36■□□□□ 0.37
RAB43-204ENST00000393307 DISP1Q96F81 1524 aa17.36■□□□□ 0.37
RAB43-204ENST00000393307 HFM1A2PYH4 1435 aa17.36■□□□□ 0.37
RAB43-204ENST00000393307 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
RAB43-204ENST00000393307 RBM19Q9Y4C8 960 aaKnown RBP17.36■□□□□ 0.37
RAB43-204ENST00000393307 CC2D1BQ5T0F9 858 aaKnown RBP17.35■□□□□ 0.37
RAB43-204ENST00000393307 TNNT2P45379 298 aaPredicted RBP17.34■□□□□ 0.37
RAB43-204ENST00000393307 ABCC5O15440 1437 aa17.33■□□□□ 0.36
RAB43-204ENST00000393307 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
RAB43-204ENST00000393307 ST20-MTHFSA0A0A6YYL1 179 aa17.32■□□□□ 0.36
RAB43-204ENST00000393307 KNSTRNQ9Y448 316 aa17.32■□□□□ 0.36
RAB43-204ENST00000393307 KIAA0556O60303 1618 aa17.32■□□□□ 0.36
RAB43-204ENST00000393307 PTPRKQ15262 1439 aa17.32■□□□□ 0.36
RAB43-204ENST00000393307 TMF1P82094 1093 aa17.31■□□□□ 0.36
RAB43-204ENST00000393307 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
RAB43-204ENST00000393307 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
RAB43-204ENST00000393307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.29■□□□□ 0.363e-9■■■□□ 17
RAB43-204ENST00000393307 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
RAB43-204ENST00000393307 CEP170Q5SW79 1584 aa17.29■□□□□ 0.36
RAB43-204ENST00000393307 TRAK1Q9UPV9 953 aa17.29■□□□□ 0.36
RAB43-204ENST00000393307 PTPN23Q9H3S7 1636 aa17.28■□□□□ 0.36
RAB43-204ENST00000393307 GPATCH8Q9UKJ3 1502 aaKnown RBP17.28■□□□□ 0.36
RAB43-204ENST00000393307 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
RAB43-204ENST00000393307 CD109Q6YHK3 1445 aa17.27■□□□□ 0.36
RAB43-204ENST00000393307 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
RAB43-204ENST00000393307 SRPK2P78362 688 aaKnown RBP17.26■□□□□ 0.35
RAB43-204ENST00000393307 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
RAB43-204ENST00000393307 NEFMP07197 916 aa17.25■□□□□ 0.35
RAB43-204ENST00000393307 FKBP8Q14318 412 aa17.24■□□□□ 0.35
RAB43-204ENST00000393307 NBPF8Q3BBV2 869 aa17.23■□□□□ 0.35
RAB43-204ENST00000393307 IRX6P78412 446 aaPredicted RBP17.23■□□□□ 0.35
RAB43-204ENST00000393307 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
RAB43-204ENST00000393307 KIF14Q15058 1648 aa17.22■□□□□ 0.35
RAB43-204ENST00000393307 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.35
RAB43-204ENST00000393307 CCDC141Q6ZP82 1450 aa17.2■□□□□ 0.34
RAB43-204ENST00000393307 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
RAB43-204ENST00000393307 PLEKHH2Q8IVE3 1493 aa17.19■□□□□ 0.34
RAB43-204ENST00000393307 NUTM2FA1L443 756 aa17.19■□□□□ 0.34
RAB43-204ENST00000393307 NBPF1Q3BBV0 1214 aa17.18■□□□□ 0.34
RAB43-204ENST00000393307 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
RAB43-204ENST00000393307 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
RAB43-204ENST00000393307 USP47Q96K76 1375 aa17.17■□□□□ 0.34
RAB43-204ENST00000393307 AKNAQ7Z591 1439 aa17.17■□□□□ 0.34
RAB43-204ENST00000393307 SOX12O15370 315 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms