RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 KRI1Q8N9T8 703 aaKnown RBP3.56□□□□□ -1.84
SNORA48.1-201ENST00000390879 IL27Q8NEV9 243 aa3.56□□□□□ -1.84
SNORA48.1-201ENST00000390879 DDX27Q96GQ7 796 aaKnown RBP3.56□□□□□ -1.84
SNORA48.1-201ENST00000390879 MLLT3P42568 568 aaPredicted RBP3.55□□□□□ -1.84
SNORA48.1-201ENST00000390879 MFSD10Q14728 455 aa3.55□□□□□ -1.84
SNORA48.1-201ENST00000390879 GPIHBP1Q8IV16 184 aa3.55□□□□□ -1.84
SNORA48.1-201ENST00000390879 CDAN1Q8IWY9 1227 aa3.55□□□□□ -1.84
SNORA48.1-201ENST00000390879 MS4A4AQ96JQ5 239 aa3.55□□□□□ -1.84
SNORA48.1-201ENST00000390879 AK7Q96M32 723 aa3.55□□□□□ -1.84
SNORA48.1-201ENST00000390879 KIF12Q96FN5 646 aa3.54□□□□□ -1.84
SNORA48.1-201ENST00000390879 CRISPLD2Q9H0B8 497 aa3.54□□□□□ -1.84
SNORA48.1-201ENST00000390879 KDM4CQ9H3R0 1056 aa3.54□□□□□ -1.84
SNORA48.1-201ENST00000390879 UBTFP17480 764 aaKnown RBP3.53□□□□□ -1.84
SNORA48.1-201ENST00000390879 GOLGA2Q08379 1002 aa3.53□□□□□ -1.84
SNORA48.1-201ENST00000390879 PODXL2Q9NZ53 605 aa3.53□□□□□ -1.84
SNORA48.1-201ENST00000390879 DPYSL4O14531 572 aa3.52□□□□□ -1.85
SNORA48.1-201ENST00000390879 PDE4DQ08499 809 aa3.52□□□□□ -1.85
SNORA48.1-201ENST00000390879 CAMK2BQ13554 666 aa3.52□□□□□ -1.85
SNORA48.1-201ENST00000390879 SPNS2Q8IVW8 549 aa3.52□□□□□ -1.85
SNORA48.1-201ENST00000390879 PHF12Q96QT6 1004 aa3.52□□□□□ -1.85
SNORA48.1-201ENST00000390879 ARID3AQ99856 593 aa3.52□□□□□ -1.85
SNORA48.1-201ENST00000390879 TRIM66O15016 1216 aa3.51□□□□□ -1.85
SNORA48.1-201ENST00000390879 PPP1R15BQ5SWA1 713 aa3.51□□□□□ -1.85
SNORA48.1-201ENST00000390879 FAM163AQ96GL9 167 aaPredicted RBP3.51□□□□□ -1.85
SNORA48.1-201ENST00000390879 TMEM106CQ9BVX2 250 aa3.51□□□□□ -1.85
SNORA48.1-201ENST00000390879 ZMYND15Q9H091 742 aa3.51□□□□□ -1.85
SNORA48.1-201ENST00000390879 ZRANB1Q9UGI0 708 aa3.51□□□□□ -1.85
SNORA48.1-201ENST00000390879 ARIH1Q9Y4X5 557 aaPredicted RBP3.51□□□□□ -1.85
SNORA48.1-201ENST00000390879 MKRN3Q13064 507 aaKnown RBP3.5□□□□□ -1.85
SNORA48.1-201ENST00000390879 RSPH6AQ9H0K4 717 aa3.5□□□□□ -1.85
SNORA48.1-201ENST00000390879 FAM117AQ9C073 453 aa3.49□□□□□ -1.85
SNORA48.1-201ENST00000390879 EMILIN3Q9NT22 766 aa3.49□□□□□ -1.85
SNORA48.1-201ENST00000390879 TRPC6Q9Y210 931 aa3.49□□□□□ -1.85
SNORA48.1-201ENST00000390879 ZNF316A6NFI3 1004 aaPredicted RBP3.48□□□□□ -1.85
SNORA48.1-201ENST00000390879 ARID3CA6NKF2 412 aa3.48□□□□□ -1.85
SNORA48.1-201ENST00000390879 CD44P16070 742 aaKnown RBP3.48□□□□□ -1.85
SNORA48.1-201ENST00000390879 GPHNQ9NQX3 736 aaPredicted RBP3.48□□□□□ -1.85
SNORA48.1-201ENST00000390879 NUTM2FA1L443 756 aa3.47□□□□□ -1.85
SNORA48.1-201ENST00000390879 GRXCR2A6NFK2 248 aa3.47□□□□□ -1.85
SNORA48.1-201ENST00000390879 GPR37O15354 613 aa3.47□□□□□ -1.85
SNORA48.1-201ENST00000390879 POTEJP0CG39 1038 aa3.47□□□□□ -1.85
SNORA48.1-201ENST00000390879 TRIM26Q12899 539 aaPredicted RBP3.47□□□□□ -1.85
SNORA48.1-201ENST00000390879 DSG2Q14126 1118 aa3.47□□□□□ -1.85
SNORA48.1-201ENST00000390879 PDIA6Q15084 440 aa3.47□□□□□ -1.85
SNORA48.1-201ENST00000390879 C1orf115Q9H7X2 142 aa3.47□□□□□ -1.85
SNORA48.1-201ENST00000390879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNORA48.1-201ENST00000390879 PLEKHG3A1L390 1219 aa3.46□□□□□ -1.86
SNORA48.1-201ENST00000390879 SPDYE16A6NNV3 312 aaPredicted RBP3.46□□□□□ -1.86
SNORA48.1-201ENST00000390879 CCDC102AQ96A19 550 aa3.46□□□□□ -1.86
SNORA48.1-201ENST00000390879 MS4A3Q96HJ5 214 aa3.46□□□□□ -1.86
SNORA48.1-201ENST00000390879 RANGAP1P46060 587 aaPredicted RBP3.45□□□□□ -1.86
SNORA48.1-201ENST00000390879 DPY19L2Q6NUT2 758 aa3.45□□□□□ -1.86
SNORA48.1-201ENST00000390879 PARP9Q8IXQ6 854 aa3.45□□□□□ -1.86
SNORA48.1-201ENST00000390879 TMC2Q8TDI7 906 aa3.45□□□□□ -1.86
SNORA48.1-201ENST00000390879 APBB1O00213 710 aa3.44□□□□□ -1.86
SNORA48.1-201ENST00000390879 MAP2K5Q13163 448 aa3.44□□□□□ -1.86
SNORA48.1-201ENST00000390879 TTLL12Q14166 644 aaPredicted RBP3.44□□□□□ -1.86
SNORA48.1-201ENST00000390879 PLPP6Q8IY26 295 aa3.44□□□□□ -1.86
SNORA48.1-201ENST00000390879 UPF1Q92900 1129 aaKnown RBP eCLIP3.44□□□□□ -1.86
SNORA48.1-201ENST00000390879 DDRGK1Q96HY6 314 aa3.44□□□□□ -1.86
SNORA48.1-201ENST00000390879 MINK1Q8N4C8 1332 aaPredicted RBP3.44□□□□□ -1.86
SNORA48.1-201ENST00000390879 TTLL13PA6NNM8 815 aa3.43□□□□□ -1.86
SNORA48.1-201ENST00000390879 IRF6O14896 467 aa3.43□□□□□ -1.86
SNORA48.1-201ENST00000390879 GNPATO15228 680 aa3.43□□□□□ -1.86
SNORA48.1-201ENST00000390879 FECHP22830 423 aa3.43□□□□□ -1.86
SNORA48.1-201ENST00000390879 MAP3K9P80192 1104 aa3.43□□□□□ -1.86
SNORA48.1-201ENST00000390879 MICALL2Q8IY33 904 aa3.43□□□□□ -1.86
SNORA48.1-201ENST00000390879 DDX12PQ92771 950 aa3.43□□□□□ -1.86
SNORA48.1-201ENST00000390879 C2orf72A6NCS6 295 aa3.42□□□□□ -1.86
SNORA48.1-201ENST00000390879 HRCP23327 699 aa3.42□□□□□ -1.86
SNORA48.1-201ENST00000390879 FOXK1P85037 733 aa3.42□□□□□ -1.86
SNORA48.1-201ENST00000390879 FLIIQ13045 1269 aa3.42□□□□□ -1.86
SNORA48.1-201ENST00000390879 AMHR2Q16671 573 aa3.42□□□□□ -1.86
SNORA48.1-201ENST00000390879 CLUAP1Q96AJ1 413 aa3.42□□□□□ -1.86
SNORA48.1-201ENST00000390879 BMP2KQ9NSY1 1161 aaPredicted RBP3.42□□□□□ -1.86
SNORA48.1-201ENST00000390879 TRIM35Q9UPQ4 493 aa3.42□□□□□ -1.86
SNORA48.1-201ENST00000390879 FCHSD2O94868 740 aa3.41□□□□□ -1.86
SNORA48.1-201ENST00000390879 OSBPP22059 807 aa3.41□□□□□ -1.86
SNORA48.1-201ENST00000390879 TIE1P35590 1138 aa3.41□□□□□ -1.86
SNORA48.1-201ENST00000390879 ILDR1Q86SU0 546 aaPredicted RBP3.41□□□□□ -1.86
SNORA48.1-201ENST00000390879 ATP1B4Q9UN42 357 aaPredicted RBP3.41□□□□□ -1.86
SNORA48.1-201ENST00000390879 PRIM1P49642 420 aaKnown RBP3.4□□□□□ -1.87
SNORA48.1-201ENST00000390879 HIC1Q14526 733 aa3.4□□□□□ -1.87
SNORA48.1-201ENST00000390879 GIGYF2Q6Y7W6 1299 aaKnown RBP3.4□□□□□ -1.87
SNORA48.1-201ENST00000390879 CCDC82Q8N4S0 544 aa3.4□□□□□ -1.87
SNORA48.1-201ENST00000390879 PCMTD1Q96MG8 357 aaPredicted RBP3.4□□□□□ -1.87
SNORA48.1-201ENST00000390879 G3V3G9 751 aa3.39□□□□□ -1.87
SNORA48.1-201ENST00000390879 ONECUT3O60422 494 aaPredicted RBP3.39□□□□□ -1.87
SNORA48.1-201ENST00000390879 MS4A1P11836 297 aa3.39□□□□□ -1.87
SNORA48.1-201ENST00000390879 PDIA4P13667 645 aaKnown RBP3.39□□□□□ -1.87
SNORA48.1-201ENST00000390879 PDCD7Q8N8D1 485 aaKnown RBP3.39□□□□□ -1.87
SNORA48.1-201ENST00000390879 BOLA1Q9Y3E2 137 aa3.39□□□□□ -1.87
SNORA48.1-201ENST00000390879 TRAK2O60296 914 aa3.38□□□□□ -1.87
SNORA48.1-201ENST00000390879 PTGDRQ13258 359 aa3.38□□□□□ -1.87
SNORA48.1-201ENST00000390879 NPM2Q86SE8 214 aaKnown RBP3.38□□□□□ -1.87
SNORA48.1-201ENST00000390879 REPIN1Q9BWE0 567 aaKnown RBP3.38□□□□□ -1.87
SNORA48.1-201ENST00000390879 A6NJR5 290 aa3.37□□□□□ -1.87
SNORA48.1-201ENST00000390879 KIF3CO14782 793 aa3.37□□□□□ -1.87
SNORA48.1-201ENST00000390879 GALR2O43603 387 aaPredicted RBP3.37□□□□□ -1.87
SNORA48.1-201ENST00000390879 EVI5O60447 810 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms