RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 FAM212AQ96EL1 285 aa3.6□□□□□ -1.83
TRAJ53-201ENST00000390485 GFRA3O60609 400 aa3.59□□□□□ -1.83
TRAJ53-201ENST00000390485 TMEM92Q6UXU6 159 aa3.59□□□□□ -1.83
TRAJ53-201ENST00000390485 PROM2Q8N271 834 aa3.59□□□□□ -1.83
TRAJ53-201ENST00000390485 KHSRPQ92945 711 aaKnown RBP eCLIP3.58□□□□□ -1.84
TRAJ53-201ENST00000390485 ARHGAP33O14559 1287 aa3.57□□□□□ -1.84
TRAJ53-201ENST00000390485 PTPN5P54829 565 aa3.57□□□□□ -1.84
TRAJ53-201ENST00000390485 SUZ12Q15022 739 aaKnown RBP3.57□□□□□ -1.84
TRAJ53-201ENST00000390485 STK17AQ9UEE5 414 aa3.57□□□□□ -1.84
TRAJ53-201ENST00000390485 NRG2O14511 850 aaPredicted RBP3.55□□□□□ -1.84
TRAJ53-201ENST00000390485 PYGBP11216 843 aa3.55□□□□□ -1.84
TRAJ53-201ENST00000390485 TREML4Q6UXN2 200 aa3.54□□□□□ -1.84
TRAJ53-201ENST00000390485 ITGBL1O95965 494 aaPredicted RBP3.53□□□□□ -1.84
TRAJ53-201ENST00000390485 ZNF467Q7Z7K2 595 aaPredicted RBP3.53□□□□□ -1.84
TRAJ53-201ENST00000390485 ZBTB47Q9UFB7 747 aaPredicted RBP3.53□□□□□ -1.84
TRAJ53-201ENST00000390485 LHX6Q9UPM6 363 aa3.53□□□□□ -1.84
TRAJ53-201ENST00000390485 DMRTA1Q5VZB9 504 aa3.52□□□□□ -1.85
TRAJ53-201ENST00000390485 PSEN1P49768 467 aa3.51□□□□□ -1.85
TRAJ53-201ENST00000390485 THSD4Q6ZMP0 1018 aa3.51□□□□□ -1.85
TRAJ53-201ENST00000390485 EHMT2Q96KQ7 1210 aa3.51□□□□□ -1.85
TRAJ53-201ENST00000390485 NUDT7P0C024 238 aa3.5□□□□□ -1.85
TRAJ53-201ENST00000390485 STAC3Q96MF2 364 aa3.5□□□□□ -1.85
TRAJ53-201ENST00000390485 MICALL2Q8IY33 904 aa3.49□□□□□ -1.85
TRAJ53-201ENST00000390485 PSEN2P49810 448 aa3.47□□□□□ -1.85
TRAJ53-201ENST00000390485 PLCD3Q8N3E9 789 aa3.47□□□□□ -1.85
TRAJ53-201ENST00000390485 PSDA5PKW4 1024 aaPredicted RBP3.46□□□□□ -1.86
TRAJ53-201ENST00000390485 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
TRAJ53-201ENST00000390485 WIPF1O43516 503 aa3.45□□□□□ -1.86
TRAJ53-201ENST00000390485 CABP2Q9NPB3 220 aa3.45□□□□□ -1.86
TRAJ53-201ENST00000390485 POTECB2RU33 542 aa3.44□□□□□ -1.86
TRAJ53-201ENST00000390485 INSM1Q01101 510 aaPredicted RBP3.44□□□□□ -1.86
TRAJ53-201ENST00000390485 VPS9D1Q9Y2B5 631 aa3.44□□□□□ -1.86
TRAJ53-201ENST00000390485 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.43□□□□□ -1.86
TRAJ53-201ENST00000390485 BHMG1C9JSJ3 638 aaPredicted RBP3.43□□□□□ -1.86
TRAJ53-201ENST00000390485 CHRM1P11229 460 aaPredicted RBP3.43□□□□□ -1.86
TRAJ53-201ENST00000390485 PDAP1Q13442 181 aaKnown RBP3.43□□□□□ -1.86
TRAJ53-201ENST00000390485 SLC34A2O95436 690 aa3.42□□□□□ -1.86
TRAJ53-201ENST00000390485 WNT2BQ93097 391 aa3.42□□□□□ -1.86
TRAJ53-201ENST00000390485 PCDHGA4Q9Y5G9 962 aa3.42□□□□□ -1.86
TRAJ53-201ENST00000390485 KDM4FA0A1W2PPD8 638 aa3.41□□□□□ -1.86
TRAJ53-201ENST00000390485 KRTAP9-2Q9BYQ4 174 aa3.41□□□□□ -1.86
TRAJ53-201ENST00000390485 KCNC4Q03721 635 aa3.4□□□□□ -1.87
TRAJ53-201ENST00000390485 SLC4A5Q9BY07 1137 aa3.4□□□□□ -1.87
TRAJ53-201ENST00000390485 PRKD2Q9BZL6 878 aa3.4□□□□□ -1.87
TRAJ53-201ENST00000390485 V9GY48 417 aaPredicted RBP3.4□□□□□ -1.87
TRAJ53-201ENST00000390485 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
TRAJ53-201ENST00000390485 WFS1O76024 890 aa3.39□□□□□ -1.87
TRAJ53-201ENST00000390485 PDZRN3Q9UPQ7 1066 aa3.39□□□□□ -1.87
TRAJ53-201ENST00000390485 GOLGA8CPA6NN73 597 aa3.37□□□□□ -1.87
TRAJ53-201ENST00000390485 MYT1Q01538 1121 aa3.37□□□□□ -1.87
TRAJ53-201ENST00000390485 KIF3CO14782 793 aa3.36□□□□□ -1.87
TRAJ53-201ENST00000390485 NFX1Q12986 1120 aaKnown RBP3.36□□□□□ -1.87
TRAJ53-201ENST00000390485 KRTAP1-3Q8IUG1 177 aa3.36□□□□□ -1.87
TRAJ53-201ENST00000390485 XP32Q5T750 250 aa3.35□□□□□ -1.87
TRAJ53-201ENST00000390485 NYAP1Q6ZVC0 841 aa3.35□□□□□ -1.87
TRAJ53-201ENST00000390485 MRPL50Q8N5N7 158 aaKnown RBP3.35□□□□□ -1.87
TRAJ53-201ENST00000390485 KCNK17Q96T54 332 aa3.35□□□□□ -1.87
TRAJ53-201ENST00000390485 PPP4R3BQ5MIZ7 849 aa3.34□□□□□ -1.87
TRAJ53-201ENST00000390485 EFCAB3Q8N7B9 438 aa3.34□□□□□ -1.87
TRAJ53-201ENST00000390485 KCNH8Q96L42 1107 aa3.34□□□□□ -1.87
TRAJ53-201ENST00000390485 FAM181BA6NEQ2 426 aa3.33□□□□□ -1.88
TRAJ53-201ENST00000390485 GSE1Q14687 1217 aa3.33□□□□□ -1.88
TRAJ53-201ENST00000390485 MS4A4AQ96JQ5 239 aa3.33□□□□□ -1.88
TRAJ53-201ENST00000390485 DGAT1O75907 488 aa3.32□□□□□ -1.88
TRAJ53-201ENST00000390485 C2orf72A6NCS6 295 aa3.31□□□□□ -1.88
TRAJ53-201ENST00000390485 LCE2CQ5TA81 110 aa3.31□□□□□ -1.88
TRAJ53-201ENST00000390485 PSMG3-AS1Q96PY0 264 aa3.3□□□□□ -1.88
TRAJ53-201ENST00000390485 ZBED2Q9BTP6 218 aa3.3□□□□□ -1.88
TRAJ53-201ENST00000390485 PKDCCQ504Y2 493 aa3.29□□□□□ -1.88
TRAJ53-201ENST00000390485 TRIM67Q6ZTA4 783 aa3.29□□□□□ -1.88
TRAJ53-201ENST00000390485 NBPF3Q9H094 633 aa3.29□□□□□ -1.88
TRAJ53-201ENST00000390485 SOX12O15370 315 aa3.28□□□□□ -1.88
TRAJ53-201ENST00000390485 LORP23490 312 aaPredicted RBP3.28□□□□□ -1.88
TRAJ53-201ENST00000390485 ANKK1Q8NFD2 765 aa3.28□□□□□ -1.88
TRAJ53-201ENST00000390485 SOWAHBA6NEL2 793 aa3.27□□□□□ -1.89
TRAJ53-201ENST00000390485 BCAMP50895 628 aa3.27□□□□□ -1.89
TRAJ53-201ENST00000390485 PTCD2Q8WV60 388 aaKnown RBP3.27□□□□□ -1.89
TRAJ53-201ENST00000390485 BCL2L12Q9HB09 334 aa3.27□□□□□ -1.89
TRAJ53-201ENST00000390485 WBP1LQ9NX94 342 aa3.27□□□□□ -1.89
TRAJ53-201ENST00000390485 PPP1R18Q6NYC8 613 aa3.26□□□□□ -1.89
TRAJ53-201ENST00000390485 ANO8Q9HCE9 1232 aaPredicted RBP3.26□□□□□ -1.89
TRAJ53-201ENST00000390485 AAASQ9NRG9 546 aa3.25□□□□□ -1.89
TRAJ53-201ENST00000390485 KRTAP4-8A0A0G2JLE6 195 aa3.24□□□□□ -1.89
TRAJ53-201ENST00000390485 LCE3BQ5TA77 95 aa3.24□□□□□ -1.89
TRAJ53-201ENST00000390485 KCTD17Q8N5Z5 321 aa3.24□□□□□ -1.89
TRAJ53-201ENST00000390485 ST8SIA5O15466 376 aa3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 PRR20EP86478 221 aa3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 PRR20CP86479 221 aa3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 PRR20DP86480 221 aa3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 PRR20BP86481 221 aa3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 PRR20AP86496 221 aa3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 PHF8Q9UPP1 1060 aa3.23□□□□□ -1.89
TRAJ53-201ENST00000390485 GSK3AP49840 483 aa3.22□□□□□ -1.89
TRAJ53-201ENST00000390485 TJAP1Q5JTD0 557 aa3.22□□□□□ -1.89
TRAJ53-201ENST00000390485 ZSCAN1Q8NBB4 408 aa3.22□□□□□ -1.89
TRAJ53-201ENST00000390485 TERTO14746 1132 aaKnown RBP3.21□□□□□ -1.9
TRAJ53-201ENST00000390485 PTPREP23469 700 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms