RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 ARID4BQ4LE39 1312 aaPredicted RBP11.81□□□□□ -0.52
TRAV27-201ENST00000390457 SIGLEC1Q9BZZ2 1709 aa11.8□□□□□ -0.52
TRAV27-201ENST00000390457 YEATS2Q9ULM3 1422 aa11.8□□□□□ -0.52
TRAV27-201ENST00000390457 MAGI2Q86UL8 1455 aa11.79□□□□□ -0.52
TRAV27-201ENST00000390457 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
TRAV27-201ENST00000390457 PLCH2O75038 1416 aa11.78□□□□□ -0.52
TRAV27-201ENST00000390457 CDK13Q14004 1512 aaKnown RBP11.78□□□□□ -0.52
TRAV27-201ENST00000390457 RIMS1Q86UR5 1692 aaKnown RBP11.78□□□□□ -0.52
TRAV27-201ENST00000390457 ZFYVE16Q7Z3T8 1539 aa11.76□□□□□ -0.53
TRAV27-201ENST00000390457 HECW1Q76N89 1606 aa11.76□□□□□ -0.53
TRAV27-201ENST00000390457 POGZQ7Z3K3 1410 aa11.76□□□□□ -0.53
TRAV27-201ENST00000390457 SCAPERQ9BY12 1400 aa11.76□□□□□ -0.53
TRAV27-201ENST00000390457 HSPA2P54652 639 aa11.74□□□□□ -0.53
TRAV27-201ENST00000390457 ARHGAP35Q9NRY4 1499 aa11.73□□□□□ -0.53
TRAV27-201ENST00000390457 FMN1Q68DA7 1419 aa11.72□□□□□ -0.53
TRAV27-201ENST00000390457 EFCAB2Q5VUJ9 269 aa11.72□□□□□ -0.53
TRAV27-201ENST00000390457 ARHGEF12Q9NZN5 1544 aa11.71□□□□□ -0.53
TRAV27-201ENST00000390457 ATP10AO60312 1499 aa11.71□□□□□ -0.53
TRAV27-201ENST00000390457 TROQ12816 1431 aaPredicted RBP11.69□□□□□ -0.54
TRAV27-201ENST00000390457 KIF14Q15058 1648 aa11.69□□□□□ -0.54
TRAV27-201ENST00000390457 MLECQ14165 292 aa11.69□□□□□ -0.54
TRAV27-201ENST00000390457 FER1L4A9Z1Z3 1794 aa11.69□□□□□ -0.54
TRAV27-201ENST00000390457 C9orf84Q5VXU9 1444 aa11.69□□□□□ -0.54
TRAV27-201ENST00000390457 UBTFP17480 764 aaKnown RBP11.68□□□□□ -0.54
TRAV27-201ENST00000390457 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
TRAV27-201ENST00000390457 MYO5CQ9NQX4 1742 aa11.68□□□□□ -0.54
TRAV27-201ENST00000390457 KDM5CP41229 1560 aa11.67□□□□□ -0.54
TRAV27-201ENST00000390457 AFAP1Q8N556 730 aa11.67□□□□□ -0.54
TRAV27-201ENST00000390457 ZNF518AQ6AHZ1 1483 aa11.67□□□□□ -0.54
TRAV27-201ENST00000390457 RNF39Q9H2S5 420 aa11.66□□□□□ -0.54
TRAV27-201ENST00000390457 LRRIQ1Q96JM4 1722 aa11.66□□□□□ -0.54
TRAV27-201ENST00000390457 SETD1BQ9UPS6 1966 aaKnown RBP11.65□□□□□ -0.54
TRAV27-201ENST00000390457 CEBPAP49715 358 aaPredicted RBP11.65□□□□□ -0.54
TRAV27-201ENST00000390457 CERKQ8TCT0 537 aa11.65□□□□□ -0.54
TRAV27-201ENST00000390457 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
TRAV27-201ENST00000390457 REREQ9P2R6 1566 aa11.64□□□□□ -0.55
TRAV27-201ENST00000390457 EHMT2Q96KQ7 1210 aa11.64□□□□□ -0.55
TRAV27-201ENST00000390457 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
TRAV27-201ENST00000390457 DIP2CQ9Y2E4 1556 aa11.63□□□□□ -0.55
TRAV27-201ENST00000390457 ARHGAP5Q13017 1502 aa11.63□□□□□ -0.55
TRAV27-201ENST00000390457 CDC42BPBQ9Y5S2 1711 aa11.63□□□□□ -0.55
TRAV27-201ENST00000390457 PREX1Q8TCU6 1659 aa11.62□□□□□ -0.55
TRAV27-201ENST00000390457 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
TRAV27-201ENST00000390457 CLIP1P30622 1438 aa11.61□□□□□ -0.55
TRAV27-201ENST00000390457 TRAPPC8Q9Y2L5 1435 aa11.61□□□□□ -0.55
TRAV27-201ENST00000390457 AGLP35573 1532 aa11.61□□□□□ -0.55
TRAV27-201ENST00000390457 STRCQ7RTU9 1775 aa11.61□□□□□ -0.55
TRAV27-201ENST00000390457 CASKIN1Q8WXD9 1431 aa11.6□□□□□ -0.55
TRAV27-201ENST00000390457 ABCA6Q8N139 1617 aa11.6□□□□□ -0.55
TRAV27-201ENST00000390457 PREX2Q70Z35 1606 aa11.59□□□□□ -0.55
TRAV27-201ENST00000390457 ABCC1P33527 1531 aa11.59□□□□□ -0.55
TRAV27-201ENST00000390457 UHRF1BP1Q6BDS2 1440 aa11.58□□□□□ -0.56
TRAV27-201ENST00000390457 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
TRAV27-201ENST00000390457 KIDINS220Q9ULH0 1771 aa11.57□□□□□ -0.56
TRAV27-201ENST00000390457 C3P01024 1663 aa11.56□□□□□ -0.56
TRAV27-201ENST00000390457 ITSN2Q9NZM3 1697 aa11.55□□□□□ -0.56
TRAV27-201ENST00000390457 CDC42BPAQ5VT25 1732 aa11.55□□□□□ -0.56
TRAV27-201ENST00000390457 PTPRTO14522 1441 aa11.55□□□□□ -0.56
TRAV27-201ENST00000390457 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
TRAV27-201ENST00000390457 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
TRAV27-201ENST00000390457 GPATCH8Q9UKJ3 1502 aaKnown RBP11.53□□□□□ -0.56
TRAV27-201ENST00000390457 SAMD9LQ8IVG5 1584 aa11.53□□□□□ -0.56
TRAV27-201ENST00000390457 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.56
TRAV27-201ENST00000390457 LTBP4Q8N2S1 1624 aa11.52□□□□□ -0.57
TRAV27-201ENST00000390457 NPATQ14207 1427 aa11.51□□□□□ -0.57
TRAV27-201ENST00000390457 NCOA1Q15788 1441 aa11.51□□□□□ -0.57
TRAV27-201ENST00000390457 KIAA1107Q9UPP5 1409 aa11.51□□□□□ -0.57
TRAV27-201ENST00000390457 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
TRAV27-201ENST00000390457 HNRNPMP52272 730 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRAV27-201ENST00000390457 ZMYM3Q14202 1370 aa11.49□□□□□ -0.57
TRAV27-201ENST00000390457 SYCP2Q9BX26 1530 aa11.49□□□□□ -0.57
TRAV27-201ENST00000390457 MROH2AA6NES4 1674 aa11.49□□□□□ -0.57
TRAV27-201ENST00000390457 ESF1Q9H501 851 aaKnown RBP11.48□□□□□ -0.57
TRAV27-201ENST00000390457 SPAG9O60271 1321 aaKnown RBP11.48□□□□□ -0.57
TRAV27-201ENST00000390457 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
TRAV27-201ENST00000390457 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
TRAV27-201ENST00000390457 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
TRAV27-201ENST00000390457 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.57
TRAV27-201ENST00000390457 ATP7AQ04656 1500 aa11.46□□□□□ -0.57
TRAV27-201ENST00000390457 IQSEC2Q5JU85 1478 aa11.46□□□□□ -0.57
TRAV27-201ENST00000390457 ILDR2Q71H61 639 aa11.46□□□□□ -0.57
TRAV27-201ENST00000390457 PLEKHH2Q8IVE3 1493 aa11.45□□□□□ -0.58
TRAV27-201ENST00000390457 CFDP1Q9UEE9 299 aaPredicted RBP11.45□□□□□ -0.58
TRAV27-201ENST00000390457 CAMSAP1Q5T5Y3 1602 aa11.45□□□□□ -0.58
TRAV27-201ENST00000390457 A2MP01023 1474 aa11.44□□□□□ -0.58
TRAV27-201ENST00000390457 PTPRKQ15262 1439 aa11.44□□□□□ -0.58
TRAV27-201ENST00000390457 SUPT6HQ7KZ85 1726 aaKnown RBP11.44□□□□□ -0.58
TRAV27-201ENST00000390457 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
TRAV27-201ENST00000390457 CCNB3Q8WWL7 1395 aa11.43□□□□□ -0.58
TRAV27-201ENST00000390457 DISP3Q9P2K9 1392 aa11.42□□□□□ -0.58
TRAV27-201ENST00000390457 ZNF644Q9H582 1327 aaPredicted RBP11.42□□□□□ -0.58
TRAV27-201ENST00000390457 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
TRAV27-201ENST00000390457 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
TRAV27-201ENST00000390457 TCOF1Q13428 1488 aaKnown RBP11.42□□□□□ -0.58
TRAV27-201ENST00000390457 ZNF142P52746 1687 aaPredicted RBP11.42□□□□□ -0.58
TRAV27-201ENST00000390457 CLTCQ00610 1675 aaKnown RBP11.41□□□□□ -0.58
TRAV27-201ENST00000390457 MTUS2Q5JR59 1369 aa11.41□□□□□ -0.58
TRAV27-201ENST00000390457 PKD2Q13563 968 aa11.4□□□□□ -0.58
TRAV27-201ENST00000390457 GGT6Q6P531 493 aa11.4□□□□□ -0.58
TRAV27-201ENST00000390457 RTEL1-TNFRSF6BF6WH68 1400 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms