RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 USP35Q9P2H5 1018 aa23.45■■□□□ 1.34
SSC5D-201ENST00000389623 FMN1Q68DA7 1419 aa23.44■■□□□ 1.34
SSC5D-201ENST00000389623 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
SSC5D-201ENST00000389623 PDE3BQ13370 1112 aa23.43■■□□□ 1.34
SSC5D-201ENST00000389623 GZF1Q9H116 711 aaPredicted RBP23.42■■□□□ 1.34
SSC5D-201ENST00000389623 NLRP13Q86W25 1043 aa23.4■■□□□ 1.34
SSC5D-201ENST00000389623 MORC1Q86VD1 984 aa23.38■■□□□ 1.33
SSC5D-201ENST00000389623 GBP4Q96PP9 640 aa23.38■■□□□ 1.33
SSC5D-201ENST00000389623 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
SSC5D-201ENST00000389623 RWDD1Q9H446 243 aaPredicted RBP23.36■■□□□ 1.33
SSC5D-201ENST00000389623 ARID4BQ4LE39 1312 aaPredicted RBP23.36■■□□□ 1.33
SSC5D-201ENST00000389623 ZBED9Q6R2W3 1325 aa23.35■■□□□ 1.33
SSC5D-201ENST00000389623 POGKQ9P215 609 aa23.34■■□□□ 1.33
SSC5D-201ENST00000389623 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
SSC5D-201ENST00000389623 PDE4AP27815 886 aa23.33■■□□□ 1.33
SSC5D-201ENST00000389623 GOLGA6L3A6NEY3 463 aa23.33■■□□□ 1.32
SSC5D-201ENST00000389623 ROCK2O75116 1388 aaKnown RBP23.33■■□□□ 1.32
SSC5D-201ENST00000389623 GOLGA2Q08379 1002 aa23.32■■□□□ 1.32
SSC5D-201ENST00000389623 CFAP44Q96MT7 982 aa23.31■■□□□ 1.32
SSC5D-201ENST00000389623 CHAF1AQ13111 956 aaPredicted RBP23.31■■□□□ 1.32
SSC5D-201ENST00000389623 C14orf37Q86TY3 774 aa23.3■■□□□ 1.32
SSC5D-201ENST00000389623 PTMSP20962 102 aa23.3■■□□□ 1.32
SSC5D-201ENST00000389623 IPO8O15397 1037 aaKnown RBP23.29■■□□□ 1.32
SSC5D-201ENST00000389623 NUP155O75694 1391 aa23.28■■□□□ 1.32
SSC5D-201ENST00000389623 EIF4G1Q04637 1599 aaKnown RBP23.28■■□□□ 1.32
SSC5D-201ENST00000389623 PMFBP1Q8TBY8 1022 aa23.28■■□□□ 1.32
SSC5D-201ENST00000389623 ZBTB7CA1YPR0 619 aa23.27■■□□□ 1.32
SSC5D-201ENST00000389623 GOLGA6L4A6NEF3 574 aa23.25■■□□□ 1.31
SSC5D-201ENST00000389623 GSE1Q14687 1217 aa23.25■■□□□ 1.31
SSC5D-201ENST00000389623 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
SSC5D-201ENST00000389623 WIZO95785 1651 aa23.24■■□□□ 1.31
SSC5D-201ENST00000389623 MCCP23508 829 aa23.24■■□□□ 1.31
SSC5D-201ENST00000389623 KCNJ4P48050 445 aa23.24■■□□□ 1.31
SSC5D-201ENST00000389623 NRDCO43847 1150 aa23.23■■□□□ 1.31
SSC5D-201ENST00000389623 EXOC6Q8TAG9 804 aa23.23■■□□□ 1.31
SSC5D-201ENST00000389623 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
SSC5D-201ENST00000389623 MFAP1P55081 439 aaKnown RBP23.22■■□□□ 1.31
SSC5D-201ENST00000389623 U2AF1L5P0DN76 240 aaPredicted RBP23.21■■□□□ 1.31
SSC5D-201ENST00000389623 U2AF1Q01081 240 aaKnown RBP eCLIP23.21■■□□□ 1.31
SSC5D-201ENST00000389623 GOLGA6L6A8MZA4 724 aa23.21■■□□□ 1.31
SSC5D-201ENST00000389623 RRP1P56182 461 aaKnown RBP23.21■■□□□ 1.31
SSC5D-201ENST00000389623 ITPRIPQ8IWB1 547 aa23.21■■□□□ 1.31
SSC5D-201ENST00000389623 MYBBP1AQ9BQG0 1328 aaKnown RBP23.21■■□□□ 1.31
SSC5D-201ENST00000389623 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
SSC5D-201ENST00000389623 HAP1P54257 671 aaPredicted RBP23.2■■□□□ 1.31
SSC5D-201ENST00000389623 CDK11BP21127 795 aaKnown RBP23.2■■□□□ 1.3
SSC5D-201ENST00000389623 FGD1P98174 961 aa23.2■■□□□ 1.3
SSC5D-201ENST00000389623 OS9Q13438 667 aaPredicted RBP23.2■■□□□ 1.3
SSC5D-201ENST00000389623 KIF15Q9NS87 1388 aa23.2■■□□□ 1.3
SSC5D-201ENST00000389623 PHLDB1Q86UU1 1377 aa23.19■■□□□ 1.3
SSC5D-201ENST00000389623 FAM161AQ3B820 660 aa23.19■■□□□ 1.3
SSC5D-201ENST00000389623 CENPQQ7L2Z9 268 aaPredicted RBP23.19■■□□□ 1.3
SSC5D-201ENST00000389623 ANKRD30AQ9BXX3 1397 aa23.19■■□□□ 1.3
SSC5D-201ENST00000389623 SLC4A3P48751 1232 aa23.19■■□□□ 1.3
SSC5D-201ENST00000389623 SRPK2P78362 688 aaKnown RBP23.18■■□□□ 1.3
SSC5D-201ENST00000389623 FHOD3Q2V2M9 1422 aa23.17■■□□□ 1.3
SSC5D-201ENST00000389623 CLUAP1Q96AJ1 413 aa23.17■■□□□ 1.3
SSC5D-201ENST00000389623 KIAA2012Q0VF49 1180 aa23.17■■□□□ 1.3
SSC5D-201ENST00000389623 KANK1Q14678 1352 aa23.16■■□□□ 1.3
SSC5D-201ENST00000389623 CENPJQ9HC77 1338 aaPredicted RBP23.16■■□□□ 1.3
SSC5D-201ENST00000389623 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
SSC5D-201ENST00000389623 ST20-MTHFSA0A0A6YYL1 179 aa23.15■■□□□ 1.3
SSC5D-201ENST00000389623 PLIN1O60240 522 aa23.14■■□□□ 1.3
SSC5D-201ENST00000389623 APBB1O00213 710 aa23.14■■□□□ 1.29
SSC5D-201ENST00000389623 CCDC146Q8IYE0 955 aa23.13■■□□□ 1.29
SSC5D-201ENST00000389623 SMC4Q9NTJ3 1288 aa23.12■■□□□ 1.29
SSC5D-201ENST00000389623 SAFB2Q14151 953 aaKnown RBP eCLIP23.11■■□□□ 1.29
SSC5D-201ENST00000389623 CALD1Q05682 793 aaKnown RBP23.11■■□□□ 1.29
SSC5D-201ENST00000389623 DRC7Q8IY82 874 aa23.1■■□□□ 1.29
SSC5D-201ENST00000389623 CRBNQ96SW2 442 aa23.1■■□□□ 1.29
SSC5D-201ENST00000389623 SYAP1Q96A49 352 aaPredicted RBP23.08■■□□□ 1.29
SSC5D-201ENST00000389623 ARID3AQ99856 593 aa23.08■■□□□ 1.28
SSC5D-201ENST00000389623 HSP90AA2PQ14568 343 aaPredicted RBP23.07■■□□□ 1.28
SSC5D-201ENST00000389623 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
SSC5D-201ENST00000389623 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
SSC5D-201ENST00000389623 NAP1L2Q9ULW6 460 aaPredicted RBP23.05■■□□□ 1.28
SSC5D-201ENST00000389623 CCDC18Q5T9S5 1454 aa23.05■■□□□ 1.28
SSC5D-201ENST00000389623 DDX11L8A8MPP1 907 aa23.05■■□□□ 1.28
SSC5D-201ENST00000389623 PANK3Q9H999 370 aa23.03■■□□□ 1.28
SSC5D-201ENST00000389623 KIAA1211Q6ZU35 1233 aa23.03■■□□□ 1.28
SSC5D-201ENST00000389623 USP47Q96K76 1375 aa23.02■■□□□ 1.28
SSC5D-201ENST00000389623 TAOK2Q9UL54 1235 aa23.02■■□□□ 1.28
SSC5D-201ENST00000389623 FOXD4L1Q9NU39 408 aa23.01■■□□□ 1.27
SSC5D-201ENST00000389623 CGNL1Q0VF96 1302 aa23.01■■□□□ 1.27
SSC5D-201ENST00000389623 HDGFL2Q7Z4V5 671 aaPredicted RBP23.01■■□□□ 1.27
SSC5D-201ENST00000389623 A0A0G2JS52 829 aa23■■□□□ 1.27
SSC5D-201ENST00000389623 EIF3AQ14152 1382 aaKnown RBP23■■□□□ 1.27
SSC5D-201ENST00000389623 STK26Q9P289 416 aa22.97■■□□□ 1.27
SSC5D-201ENST00000389623 RTF1Q92541 710 aaKnown RBP22.97■■□□□ 1.27
SSC5D-201ENST00000389623 CCDC7Q96M83 1385 aa22.96■■□□□ 1.27
SSC5D-201ENST00000389623 SOX12O15370 315 aa22.96■■□□□ 1.27
SSC5D-201ENST00000389623 E9PSI1 815 aa22.96■■□□□ 1.27
SSC5D-201ENST00000389623 CARMIL2Q6F5E8 1435 aa22.95■■□□□ 1.26
SSC5D-201ENST00000389623 COG6Q9Y2V7 657 aa22.94■■□□□ 1.26
SSC5D-201ENST00000389623 DDX49Q9Y6V7 483 aaKnown RBP22.93■■□□□ 1.26
SSC5D-201ENST00000389623 BCL2L13Q9BXK5 485 aa22.92■■□□□ 1.26
SSC5D-201ENST00000389623 KIF7Q2M1P5 1343 aa22.92■■□□□ 1.26
SSC5D-201ENST00000389623 GGT6Q6P531 493 aa22.92■■□□□ 1.26
SSC5D-201ENST00000389623 HNRNPMP52272 730 aaKnown RBP eCLIP22.92■■□□□ 1.26
SSC5D-201ENST00000389623 RRP7AQ9Y3A4 280 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms