RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 UACAQ9BZF9 1416 aa14.71□□□□□ -0.06
LTN1-203ENST00000389195 MPHOSPH9Q99550 1183 aa14.7□□□□□ -0.06
LTN1-203ENST00000389195 TCOF1Q13428 1488 aaKnown RBP14.7□□□□□ -0.06
LTN1-203ENST00000389195 MIA2Q96PC5 1412 aa14.69□□□□□ -0.06
LTN1-203ENST00000389195 CAMSAP2Q08AD1 1489 aa14.69□□□□□ -0.06
LTN1-203ENST00000389195 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
LTN1-203ENST00000389195 DENND4BO75064 1496 aaPredicted RBP14.66□□□□□ -0.06
LTN1-203ENST00000389195 PPP1R15AO75807 674 aaPredicted RBP14.64□□□□□ -0.07
LTN1-203ENST00000389195 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
LTN1-203ENST00000389195 TONSLQ96HA7 1378 aa14.63□□□□□ -0.07
LTN1-203ENST00000389195 ABCC10Q5T3U5 1492 aa14.62□□□□□ -0.07
LTN1-203ENST00000389195 SHROOM2Q13796 1616 aa14.62□□□□□ -0.07
LTN1-203ENST00000389195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.071e-7■■■■□ 24.4
LTN1-203ENST00000389195 TSPY4P0CV99 314 aa14.61□□□□□ -0.07
LTN1-203ENST00000389195 TSPY10P0CW01 314 aa14.61□□□□□ -0.07
LTN1-203ENST00000389195 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
LTN1-203ENST00000389195 CLASP1Q7Z460 1538 aa14.61□□□□□ -0.07
LTN1-203ENST00000389195 DDX10Q13206 875 aaKnown RBP14.6□□□□□ -0.07
LTN1-203ENST00000389195 NCOA1Q15788 1441 aa14.6□□□□□ -0.07
LTN1-203ENST00000389195 AKNAQ7Z591 1439 aa14.59□□□□□ -0.07
LTN1-203ENST00000389195 DNMT1P26358 1616 aaKnown RBP14.59□□□□□ -0.07
LTN1-203ENST00000389195 ZNF326Q5BKZ1 582 aaKnown RBP14.58□□□□□ -0.07
LTN1-203ENST00000389195 L3MBTL2Q969R5 705 aa14.58□□□□□ -0.08
LTN1-203ENST00000389195 TTC37Q6PGP7 1564 aa14.58□□□□□ -0.08
LTN1-203ENST00000389195 PKD2Q13563 968 aa14.57□□□□□ -0.08
LTN1-203ENST00000389195 AFAP1Q8N556 730 aa14.57□□□□□ -0.08
LTN1-203ENST00000389195 ABCC2Q92887 1545 aa14.56□□□□□ -0.08
LTN1-203ENST00000389195 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.55□□□□□ -0.08
LTN1-203ENST00000389195 ARHGAP5Q13017 1502 aa14.55□□□□□ -0.08
LTN1-203ENST00000389195 MYT1LQ9UL68 1186 aa14.55□□□□□ -0.08
LTN1-203ENST00000389195 C9orf84Q5VXU9 1444 aa14.54□□□□□ -0.08
LTN1-203ENST00000389195 CDC42BPBQ9Y5S2 1711 aa14.54□□□□□ -0.08
LTN1-203ENST00000389195 NUP155O75694 1391 aa14.53□□□□□ -0.08
LTN1-203ENST00000389195 ADCY10Q96PN6 1610 aa14.53□□□□□ -0.08
LTN1-203ENST00000389195 CYB5RLQ6IPT4 315 aa14.53□□□□□ -0.08
LTN1-203ENST00000389195 GCC2Q8IWJ2 1684 aa14.53□□□□□ -0.08
LTN1-203ENST00000389195 ANKRD50Q9ULJ7 1429 aa14.53□□□□□ -0.08
LTN1-203ENST00000389195 ANKRD30AQ9BXX3 1397 aa14.53□□□□□ -0.08
LTN1-203ENST00000389195 ROCK1Q13464 1354 aa14.52□□□□□ -0.08
LTN1-203ENST00000389195 ITSN2Q9NZM3 1697 aa14.52□□□□□ -0.08
LTN1-203ENST00000389195 ZCCHC11Q5TAX3 1644 aaKnown RBP14.52□□□□□ -0.09
LTN1-203ENST00000389195 SAMD9LQ8IVG5 1584 aa14.52□□□□□ -0.09
LTN1-203ENST00000389195 MBD5Q9P267 1494 aa14.52□□□□□ -0.09
LTN1-203ENST00000389195 SYCP2Q9BX26 1530 aa14.51□□□□□ -0.09
LTN1-203ENST00000389195 KIF15Q9NS87 1388 aa14.51□□□□□ -0.09
LTN1-203ENST00000389195 NBPF8Q3BBV2 869 aa14.51□□□□□ -0.09
LTN1-203ENST00000389195 KDM2AQ9Y2K7 1162 aa14.5□□□□□ -0.09
LTN1-203ENST00000389195 ARHGEF12Q9NZN5 1544 aa14.5□□□□□ -0.09
LTN1-203ENST00000389195 CNGB1Q14028 1251 aaPredicted RBP14.5□□□□□ -0.09
LTN1-203ENST00000389195 ANKRD30BQ9BXX2 1392 aa14.48□□□□□ -0.09
LTN1-203ENST00000389195 PZPP20742 1482 aa14.48□□□□□ -0.09
LTN1-203ENST00000389195 RGL3Q3MIN7 710 aa14.46□□□□□ -0.09
LTN1-203ENST00000389195 EFCAB2Q5VUJ9 269 aa14.46□□□□□ -0.09
LTN1-203ENST00000389195 TRAPPC8Q9Y2L5 1435 aa14.46□□□□□ -0.09
LTN1-203ENST00000389195 KDM5BQ9UGL1 1544 aa14.45□□□□□ -0.1
LTN1-203ENST00000389195 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
LTN1-203ENST00000389195 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
LTN1-203ENST00000389195 HSPA5P11021 654 aaKnown RBP14.43□□□□□ -0.1
LTN1-203ENST00000389195 PREX2Q70Z35 1606 aa14.43□□□□□ -0.1
LTN1-203ENST00000389195 ASXL2Q76L83 1435 aa14.43□□□□□ -0.1
LTN1-203ENST00000389195 C11orf95C9JLR9 678 aaPredicted RBP14.43□□□□□ -0.1
LTN1-203ENST00000389195 CCDC141Q6ZP82 1450 aa14.42□□□□□ -0.1
LTN1-203ENST00000389195 CROCC2H7BZ55 1655 aa14.42□□□□□ -0.1
LTN1-203ENST00000389195 POLR3GLQ9BT43 218 aa14.42□□□□□ -0.1
LTN1-203ENST00000389195 PLEKHH2Q8IVE3 1493 aa14.42□□□□□ -0.1
LTN1-203ENST00000389195 PLCH2O75038 1416 aa14.42□□□□□ -0.1
LTN1-203ENST00000389195 TIMELESSQ9UNS1 1208 aa14.42□□□□□ -0.1
LTN1-203ENST00000389195 ADGRL2O95490 1459 aa14.4□□□□□ -0.1
LTN1-203ENST00000389195 ADGBQ8N7X0 1667 aa14.39□□□□□ -0.11
LTN1-203ENST00000389195 MYO5CQ9NQX4 1742 aa14.39□□□□□ -0.11
LTN1-203ENST00000389195 UHRF1BP1LA0JNW5 1464 aa14.38□□□□□ -0.11
LTN1-203ENST00000389195 WDR7Q9Y4E6 1490 aa14.38□□□□□ -0.11
LTN1-203ENST00000389195 SPAG9O60271 1321 aaKnown RBP14.38□□□□□ -0.11
LTN1-203ENST00000389195 DCAF11Q8TEB1 546 aa14.38□□□□□ -0.11
LTN1-203ENST00000389195 ACIN1Q9UKV3 1341 aaKnown RBP14.38□□□□□ -0.11
LTN1-203ENST00000389195 RAPGEF3O95398 923 aa14.36□□□□□ -0.11
LTN1-203ENST00000389195 SENP3Q9H4L4 574 aaPredicted RBP14.36□□□□□ -0.11
LTN1-203ENST00000389195 KIAA1107Q9UPP5 1409 aa14.36□□□□□ -0.11
LTN1-203ENST00000389195 RPRD2Q5VT52 1461 aaKnown RBP14.36□□□□□ -0.11
LTN1-203ENST00000389195 SCAPERQ9BY12 1400 aa14.36□□□□□ -0.11
LTN1-203ENST00000389195 FANCAO15360 1455 aa14.34□□□□□ -0.11
LTN1-203ENST00000389195 KIF3BO15066 747 aa14.34□□□□□ -0.11
LTN1-203ENST00000389195 WASHC2AQ641Q2 1341 aa14.34□□□□□ -0.11
LTN1-203ENST00000389195 RSPH4AQ5TD94 716 aa14.34□□□□□ -0.11
LTN1-203ENST00000389195 EIF4G2P78344 907 aaKnown RBP eCLIP14.33□□□□□ -0.12
LTN1-203ENST00000389195 SHANK2Q9UPX8 1470 aa14.33□□□□□ -0.12
LTN1-203ENST00000389195 ARHGEF5Q12774 1597 aa14.33□□□□□ -0.12
LTN1-203ENST00000389195 TEX14Q8IWB6 1497 aa14.32□□□□□ -0.12
LTN1-203ENST00000389195 GTF3C3Q9Y5Q9 886 aa14.32□□□□□ -0.12
LTN1-203ENST00000389195 FAM135AQ9P2D6 1515 aa14.29□□□□□ -0.12
LTN1-203ENST00000389195 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
LTN1-203ENST00000389195 ABCC1P33527 1531 aa14.29□□□□□ -0.12
LTN1-203ENST00000389195 ADGRL1O94910 1474 aa14.29□□□□□ -0.12
LTN1-203ENST00000389195 SENP3-EIF4A1A0A087X0R7 540 aa14.28□□□□□ -0.12
LTN1-203ENST00000389195 NBPF1Q3BBV0 1214 aa14.28□□□□□ -0.12
LTN1-203ENST00000389195 GGT6Q6P531 493 aa14.28□□□□□ -0.12
LTN1-203ENST00000389195 CD109Q6YHK3 1445 aa14.27□□□□□ -0.12
LTN1-203ENST00000389195 PLA2R1Q13018 1463 aa14.26□□□□□ -0.13
LTN1-203ENST00000389195 CARD11Q9BXL7 1154 aa14.25□□□□□ -0.13
LTN1-203ENST00000389195 FAM69CQ0P6D2 419 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms