RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 SPRYD3Q8NCJ5 442 aa10.22□□□□□ -0.77
NCBP3-201ENST00000389005 ROCK2O75116 1388 aaKnown RBP10.22□□□□□ -0.77
NCBP3-201ENST00000389005 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
NCBP3-201ENST00000389005 ZBED9Q6R2W3 1325 aa10.21□□□□□ -0.77
NCBP3-201ENST00000389005 U2SURPO15042 1029 aaKnown RBP10.21□□□□□ -0.77
NCBP3-201ENST00000389005 FHOD3Q2V2M9 1422 aa10.21□□□□□ -0.78
NCBP3-201ENST00000389005 PLPPR3Q6T4P5 718 aa10.2□□□□□ -0.78
NCBP3-201ENST00000389005 TPRNQ4KMQ1 711 aa10.2□□□□□ -0.78
NCBP3-201ENST00000389005 MORC1Q86VD1 984 aa10.19□□□□□ -0.78
NCBP3-201ENST00000389005 PRKRIP1Q9H875 184 aaPredicted RBP10.19□□□□□ -0.78
NCBP3-201ENST00000389005 NUP155O75694 1391 aa10.19□□□□□ -0.78
NCBP3-201ENST00000389005 USP35Q9P2H5 1018 aa10.19□□□□□ -0.78
NCBP3-201ENST00000389005 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
NCBP3-201ENST00000389005 ANKRD30AQ9BXX3 1397 aa10.17□□□□□ -0.78
NCBP3-201ENST00000389005 POGKQ9P215 609 aa10.17□□□□□ -0.78
NCBP3-201ENST00000389005 MSNP26038 577 aaKnown RBP10.17□□□□□ -0.78
NCBP3-201ENST00000389005 PNNQ9H307 717 aaKnown RBP10.17□□□□□ -0.78
NCBP3-201ENST00000389005 GBP4Q96PP9 640 aa10.16□□□□□ -0.78
NCBP3-201ENST00000389005 RWDD1Q9H446 243 aaPredicted RBP10.16□□□□□ -0.78
NCBP3-201ENST00000389005 KIF15Q9NS87 1388 aa10.16□□□□□ -0.78
NCBP3-201ENST00000389005 ZRSR1Q15695 479 aaKnown RBP10.15□□□□□ -0.78
NCBP3-201ENST00000389005 PHLDB1Q86UU1 1377 aa10.15□□□□□ -0.78
NCBP3-201ENST00000389005 PLCB2Q00722 1185 aa10.15□□□□□ -0.78
NCBP3-201ENST00000389005 SMARCA4P51532 1647 aa10.15□□□□□ -0.78
NCBP3-201ENST00000389005 GZF1Q9H116 711 aaPredicted RBP10.15□□□□□ -0.78
NCBP3-201ENST00000389005 ARID4BQ4LE39 1312 aaPredicted RBP10.15□□□□□ -0.78
NCBP3-201ENST00000389005 CCDC18Q5T9S5 1454 aa10.15□□□□□ -0.78
NCBP3-201ENST00000389005 KANK1Q14678 1352 aa10.15□□□□□ -0.78
NCBP3-201ENST00000389005 PDE4AP27815 886 aa10.15□□□□□ -0.79
NCBP3-201ENST00000389005 IPO8O15397 1037 aaKnown RBP10.14□□□□□ -0.79
NCBP3-201ENST00000389005 GOLGA2Q08379 1002 aa10.14□□□□□ -0.79
NCBP3-201ENST00000389005 C14orf37Q86TY3 774 aa10.14□□□□□ -0.79
NCBP3-201ENST00000389005 MYBBP1AQ9BQG0 1328 aaKnown RBP10.14□□□□□ -0.79
NCBP3-201ENST00000389005 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
NCBP3-201ENST00000389005 RRP1P56182 461 aaKnown RBP10.13□□□□□ -0.79
NCBP3-201ENST00000389005 GOLGA6L3A6NEY3 463 aa10.13□□□□□ -0.79
NCBP3-201ENST00000389005 EXOC6Q8TAG9 804 aa10.12□□□□□ -0.79
NCBP3-201ENST00000389005 U2AF1L5P0DN76 240 aaPredicted RBP10.12□□□□□ -0.79
NCBP3-201ENST00000389005 U2AF1Q01081 240 aaKnown RBP eCLIP10.12□□□□□ -0.798e-6■□□□□ 10.6
NCBP3-201ENST00000389005 ITPRIPQ8IWB1 547 aa10.11□□□□□ -0.79
NCBP3-201ENST00000389005 PMFBP1Q8TBY8 1022 aa10.11□□□□□ -0.79
NCBP3-201ENST00000389005 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
NCBP3-201ENST00000389005 PTMSP20962 102 aa10.11□□□□□ -0.79
NCBP3-201ENST00000389005 ST20-MTHFSA0A0A6YYL1 179 aa10.11□□□□□ -0.79
NCBP3-201ENST00000389005 ZBTB7CA1YPR0 619 aa10.11□□□□□ -0.79
NCBP3-201ENST00000389005 CHAF1AQ13111 956 aaPredicted RBP10.11□□□□□ -0.79
NCBP3-201ENST00000389005 MFAP1P55081 439 aaKnown RBP10.1□□□□□ -0.79
NCBP3-201ENST00000389005 CENPJQ9HC77 1338 aaPredicted RBP10.1□□□□□ -0.79
NCBP3-201ENST00000389005 USP47Q96K76 1375 aa10.1□□□□□ -0.79
NCBP3-201ENST00000389005 MCCP23508 829 aa10.1□□□□□ -0.79
NCBP3-201ENST00000389005 CENPQQ7L2Z9 268 aaPredicted RBP10.1□□□□□ -0.79
NCBP3-201ENST00000389005 SRPK2P78362 688 aaKnown RBP10.09□□□□□ -0.79
NCBP3-201ENST00000389005 CCDC146Q8IYE0 955 aa10.09□□□□□ -0.79
NCBP3-201ENST00000389005 FAM161AQ3B820 660 aa10.09□□□□□ -0.79
NCBP3-201ENST00000389005 EIF3AQ14152 1382 aaKnown RBP10.09□□□□□ -0.79
NCBP3-201ENST00000389005 PLEKHG5O94827 1062 aa10.09□□□□□ -0.79
NCBP3-201ENST00000389005 PLIN1O60240 522 aa10.08□□□□□ -0.8
NCBP3-201ENST00000389005 KCNJ4P48050 445 aa10.08□□□□□ -0.8
NCBP3-201ENST00000389005 OS9Q13438 667 aaPredicted RBP10.08□□□□□ -0.8
NCBP3-201ENST00000389005 KIF21BO75037 1637 aa10.08□□□□□ -0.8
NCBP3-201ENST00000389005 HAP1P54257 671 aaPredicted RBP10.08□□□□□ -0.8
NCBP3-201ENST00000389005 GSE1Q14687 1217 aa10.08□□□□□ -0.8
NCBP3-201ENST00000389005 ATAD2BQ9ULI0 1458 aa10.08□□□□□ -0.8
NCBP3-201ENST00000389005 CARMIL2Q6F5E8 1435 aa10.08□□□□□ -0.8
NCBP3-201ENST00000389005 GOLGA6L4A6NEF3 574 aa10.08□□□□□ -0.8
NCBP3-201ENST00000389005 SLC4A3P48751 1232 aa10.07□□□□□ -0.8
NCBP3-201ENST00000389005 SAFB2Q14151 953 aaKnown RBP eCLIP10.07□□□□□ -0.8
NCBP3-201ENST00000389005 NRDCO43847 1150 aa10.07□□□□□ -0.8
NCBP3-201ENST00000389005 CLUAP1Q96AJ1 413 aa10.07□□□□□ -0.8
NCBP3-201ENST00000389005 FGD1P98174 961 aa10.07□□□□□ -0.8
NCBP3-201ENST00000389005 GOLGA6L6A8MZA4 724 aa10.07□□□□□ -0.8
NCBP3-201ENST00000389005 CRBNQ96SW2 442 aa10.06□□□□□ -0.8
NCBP3-201ENST00000389005 PANK3Q9H999 370 aa10.06□□□□□ -0.8
NCBP3-201ENST00000389005 CADPSQ9ULU8 1353 aa10.06□□□□□ -0.8
NCBP3-201ENST00000389005 CCDC7Q96M83 1385 aa10.06□□□□□ -0.8
NCBP3-201ENST00000389005 APBB1O00213 710 aa10.06□□□□□ -0.8
NCBP3-201ENST00000389005 SMC4Q9NTJ3 1288 aa10.06□□□□□ -0.8
NCBP3-201ENST00000389005 ERCC6Q03468 1493 aa10.05□□□□□ -0.8
NCBP3-201ENST00000389005 RSPH6AQ9H0K4 717 aa10.05□□□□□ -0.8
NCBP3-201ENST00000389005 KIF7Q2M1P5 1343 aa10.05□□□□□ -0.8
NCBP3-201ENST00000389005 CNTLNQ9NXG0 1405 aa10.05□□□□□ -0.8
NCBP3-201ENST00000389005 CALD1Q05682 793 aaKnown RBP10.05□□□□□ -0.8
NCBP3-201ENST00000389005 KIAA2012Q0VF49 1180 aa10.04□□□□□ -0.8
NCBP3-201ENST00000389005 FGD6Q6ZV73 1430 aa10.04□□□□□ -0.8
NCBP3-201ENST00000389005 UACAQ9BZF9 1416 aa10.04□□□□□ -0.8
NCBP3-201ENST00000389005 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
NCBP3-201ENST00000389005 DDX11L8A8MPP1 907 aa10.03□□□□□ -0.8
NCBP3-201ENST00000389005 CGNL1Q0VF96 1302 aa10.03□□□□□ -0.8
NCBP3-201ENST00000389005 HDGFL2Q7Z4V5 671 aaPredicted RBP10.03□□□□□ -0.8
NCBP3-201ENST00000389005 CCDC144AA2RUR9 1427 aa10.02□□□□□ -0.81
NCBP3-201ENST00000389005 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
NCBP3-201ENST00000389005 STK26Q9P289 416 aa10.02□□□□□ -0.81
NCBP3-201ENST00000389005 KIAA1211Q6ZU35 1233 aa10.02□□□□□ -0.81
NCBP3-201ENST00000389005 SYAP1Q96A49 352 aaPredicted RBP10.02□□□□□ -0.81
NCBP3-201ENST00000389005 RRBP1Q9P2E9 1410 aaKnown RBP10.01□□□□□ -0.81
NCBP3-201ENST00000389005 WASHC2AQ641Q2 1341 aa10.01□□□□□ -0.81
NCBP3-201ENST00000389005 HNRNPMP52272 730 aaKnown RBP eCLIP10.01□□□□□ -0.81
NCBP3-201ENST00000389005 RSPH4AQ5TD94 716 aa10.01□□□□□ -0.81
NCBP3-201ENST00000389005 EFCAB2Q5VUJ9 269 aa10.01□□□□□ -0.81
NCBP3-201ENST00000389005 E9PSI1 815 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms