RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 PHF12Q96QT6 1004 aa5.82□□□□□ -1.48
RNU6-140P-201ENST00000384566 SPDYE16A6NNV3 312 aaPredicted RBP5.81□□□□□ -1.48
RNU6-140P-201ENST00000384566 GPBP1L1Q9HC44 474 aaPredicted RBP5.81□□□□□ -1.48
RNU6-140P-201ENST00000384566 CHRDL2Q6WN34 429 aa5.8□□□□□ -1.48
RNU6-140P-201ENST00000384566 IL27Q8NEV9 243 aa5.8□□□□□ -1.48
RNU6-140P-201ENST00000384566 KDM4CQ9H3R0 1056 aa5.8□□□□□ -1.48
RNU6-140P-201ENST00000384566 TRIM66O15016 1216 aa5.79□□□□□ -1.48
RNU6-140P-201ENST00000384566 PDE4DQ08499 809 aa5.79□□□□□ -1.48
RNU6-140P-201ENST00000384566 ILDR1Q86SU0 546 aaPredicted RBP5.79□□□□□ -1.48
RNU6-140P-201ENST00000384566 DPYSL4O14531 572 aa5.78□□□□□ -1.48
RNU6-140P-201ENST00000384566 PDIA6Q15084 440 aa5.78□□□□□ -1.48
RNU6-140P-201ENST00000384566 EMILIN3Q9NT22 766 aa5.78□□□□□ -1.48
RNU6-140P-201ENST00000384566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.78□□□□□ -1.48
RNU6-140P-201ENST00000384566 TIE1P35590 1138 aa5.77□□□□□ -1.49
RNU6-140P-201ENST00000384566 MS4A3Q96HJ5 214 aa5.77□□□□□ -1.49
RNU6-140P-201ENST00000384566 ZMYND15Q9H091 742 aa5.77□□□□□ -1.49
RNU6-140P-201ENST00000384566 TRPC6Q9Y210 931 aa5.77□□□□□ -1.49
RNU6-140P-201ENST00000384566 FOXK1P85037 733 aa5.76□□□□□ -1.49
RNU6-140P-201ENST00000384566 DSG2Q14126 1118 aa5.76□□□□□ -1.49
RNU6-140P-201ENST00000384566 TTLL13PA6NNM8 815 aa5.75□□□□□ -1.49
RNU6-140P-201ENST00000384566 TMC2Q8TDI7 906 aa5.75□□□□□ -1.49
RNU6-140P-201ENST00000384566 MINK1Q8N4C8 1332 aaPredicted RBP5.74□□□□□ -1.49
RNU6-140P-201ENST00000384566 RSPH6AQ9H0K4 717 aa5.74□□□□□ -1.49
RNU6-140P-201ENST00000384566 GPR37O15354 613 aa5.73□□□□□ -1.49
RNU6-140P-201ENST00000384566 MICALL2Q8IY33 904 aa5.72□□□□□ -1.49
RNU6-140P-201ENST00000384566 ZNF316A6NFI3 1004 aaPredicted RBP5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 GRXCR2A6NFK2 248 aa5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 MAP3K9P80192 1104 aa5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 MAP2K5Q13163 448 aa5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 DPY19L2Q6NUT2 758 aa5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 PLPP6Q8IY26 295 aa5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 DDRGK1Q96HY6 314 aa5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 FAM117AQ9C073 453 aa5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 BMP2KQ9NSY1 1161 aaPredicted RBP5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 TRIM35Q9UPQ4 493 aa5.71□□□□□ -1.5
RNU6-140P-201ENST00000384566 NUTM2FA1L443 756 aa5.7□□□□□ -1.5
RNU6-140P-201ENST00000384566 C19orf67A6NJJ6 358 aa5.7□□□□□ -1.5
RNU6-140P-201ENST00000384566 IRF6O14896 467 aa5.7□□□□□ -1.5
RNU6-140P-201ENST00000384566 AMHR2Q16671 573 aa5.7□□□□□ -1.5
RNU6-140P-201ENST00000384566 GNPATO15228 680 aa5.69□□□□□ -1.5
RNU6-140P-201ENST00000384566 CCDC102AQ96A19 550 aa5.69□□□□□ -1.5
RNU6-140P-201ENST00000384566 C2orf72A6NCS6 295 aa5.68□□□□□ -1.5
RNU6-140P-201ENST00000384566 KIF3CO14782 793 aa5.68□□□□□ -1.5
RNU6-140P-201ENST00000384566 HIC1Q14526 733 aa5.68□□□□□ -1.5
RNU6-140P-201ENST00000384566 TMEM121BQ9BXQ6 578 aaPredicted RBP5.68□□□□□ -1.5
RNU6-140P-201ENST00000384566 PLEKHG3A1L390 1219 aa5.67□□□□□ -1.5
RNU6-140P-201ENST00000384566 G3V3G9 751 aa5.67□□□□□ -1.5
RNU6-140P-201ENST00000384566 FCHSD2O94868 740 aa5.67□□□□□ -1.5
RNU6-140P-201ENST00000384566 OSBPP22059 807 aa5.67□□□□□ -1.5
RNU6-140P-201ENST00000384566 PTGER2P43116 358 aa5.67□□□□□ -1.5
RNU6-140P-201ENST00000384566 PDCD7Q8N8D1 485 aaKnown RBP5.67□□□□□ -1.5
RNU6-140P-201ENST00000384566 BOLA1Q9Y3E2 137 aa5.67□□□□□ -1.5
RNU6-140P-201ENST00000384566 UBTFP17480 764 aaKnown RBP5.66□□□□□ -1.5
RNU6-140P-201ENST00000384566 FLIIQ13045 1269 aa5.66□□□□□ -1.5
RNU6-140P-201ENST00000384566 PARP9Q8IXQ6 854 aa5.66□□□□□ -1.5
RNU6-140P-201ENST00000384566 GOPCQ9HD26 462 aa5.66□□□□□ -1.5
RNU6-140P-201ENST00000384566 TBC1D12O60347 775 aa5.65□□□□□ -1.5
RNU6-140P-201ENST00000384566 CLCN6P51797 869 aa5.65□□□□□ -1.5
RNU6-140P-201ENST00000384566 OCEL1Q9H607 264 aa5.65□□□□□ -1.5
RNU6-140P-201ENST00000384566 IRX5P78411 483 aaPredicted RBP5.64□□□□□ -1.51
RNU6-140P-201ENST00000384566 OXER1Q8TDS5 423 aa5.64□□□□□ -1.51
RNU6-140P-201ENST00000384566 GALR2O43603 387 aaPredicted RBP5.63□□□□□ -1.51
RNU6-140P-201ENST00000384566 FECHP22830 423 aa5.63□□□□□ -1.51
RNU6-140P-201ENST00000384566 TTLL12Q14166 644 aaPredicted RBP5.63□□□□□ -1.51
RNU6-140P-201ENST00000384566 IER5LQ5T953 404 aa5.63□□□□□ -1.51
RNU6-140P-201ENST00000384566 UPF1Q92900 1129 aaKnown RBP eCLIP5.63□□□□□ -1.51
RNU6-140P-201ENST00000384566 PTGDRQ13258 359 aa5.62□□□□□ -1.51
RNU6-140P-201ENST00000384566 DDX12PQ92771 950 aa5.62□□□□□ -1.51
RNU6-140P-201ENST00000384566 L3MBTL3Q96JM7 780 aaPredicted RBP5.62□□□□□ -1.51
RNU6-140P-201ENST00000384566 ATN1P54259 1190 aaPredicted RBP5.61□□□□□ -1.51
RNU6-140P-201ENST00000384566 PCMTD1Q96MG8 357 aaPredicted RBP5.61□□□□□ -1.51
RNU6-140P-201ENST00000384566 PODXL2Q9NZ53 605 aa5.61□□□□□ -1.51
RNU6-140P-201ENST00000384566 EVI5O60447 810 aa5.6□□□□□ -1.51
RNU6-140P-201ENST00000384566 ARID3AQ99856 593 aa5.6□□□□□ -1.51
RNU6-140P-201ENST00000384566 C1orf115Q9H7X2 142 aa5.6□□□□□ -1.51
RNU6-140P-201ENST00000384566 APBB1O00213 710 aa5.59□□□□□ -1.51
RNU6-140P-201ENST00000384566 ATMINO43313 823 aaPredicted RBP5.59□□□□□ -1.51
RNU6-140P-201ENST00000384566 ONECUT3O60422 494 aaPredicted RBP5.59□□□□□ -1.51
RNU6-140P-201ENST00000384566 PLCG2P16885 1265 aa5.59□□□□□ -1.51
RNU6-140P-201ENST00000384566 GIGYF2Q6Y7W6 1299 aaKnown RBP5.59□□□□□ -1.51
RNU6-140P-201ENST00000384566 A6NJR5 290 aa5.58□□□□□ -1.52
RNU6-140P-201ENST00000384566 MS4A1P11836 297 aa5.58□□□□□ -1.52
RNU6-140P-201ENST00000384566 PRIM1P49642 420 aaKnown RBP5.58□□□□□ -1.52
RNU6-140P-201ENST00000384566 ASTLQ6HA08 431 aaPredicted RBP5.58□□□□□ -1.52
RNU6-140P-201ENST00000384566 TMEM92Q6UXU6 159 aa5.58□□□□□ -1.52
RNU6-140P-201ENST00000384566 ARID3CA6NKF2 412 aa5.57□□□□□ -1.52
RNU6-140P-201ENST00000384566 SH3D19Q5HYK7 790 aa5.57□□□□□ -1.52
RNU6-140P-201ENST00000384566 CLCN1P35523 988 aa5.56□□□□□ -1.52
RNU6-140P-201ENST00000384566 PTCD2Q8WV60 388 aaKnown RBP5.56□□□□□ -1.52
RNU6-140P-201ENST00000384566 EPAS1Q99814 870 aa5.56□□□□□ -1.52
RNU6-140P-201ENST00000384566 REPIN1Q9BWE0 567 aaKnown RBP5.56□□□□□ -1.52
RNU6-140P-201ENST00000384566 ANO8Q9HCE9 1232 aaPredicted RBP5.56□□□□□ -1.52
RNU6-140P-201ENST00000384566 TRAK2O60296 914 aa5.55□□□□□ -1.52
RNU6-140P-201ENST00000384566 PHF14O94880 888 aa5.55□□□□□ -1.52
RNU6-140P-201ENST00000384566 TRIM26Q12899 539 aaPredicted RBP5.55□□□□□ -1.52
RNU6-140P-201ENST00000384566 TMUB1Q9BVT8 246 aa5.55□□□□□ -1.52
RNU6-140P-201ENST00000384566 GPCPD1Q9NPB8 672 aa5.55□□□□□ -1.52
RNU6-140P-201ENST00000384566 EN1Q05925 392 aaPredicted RBP5.54□□□□□ -1.52
RNU6-140P-201ENST00000384566 SKIV2LQ15477 1246 aaKnown RBP5.54□□□□□ -1.52
RNU6-140P-201ENST00000384566 NPDC1Q9NQX5 325 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms