RNA–Protein interactions for RNA: ENST00000384205.1

RNU6-4P-201, Transcript of RNA, U6 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU6-4P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-4P-201ENST00000384205 EMP3P54852 163 aa6.97□□□□□ -1.29
RNU6-4P-201ENST00000384205 HS3ST6Q96QI5 342 aa6.97□□□□□ -1.29
RNU6-4P-201ENST00000384205 VSIG10Q8N0Z9 540 aa6.95□□□□□ -1.3
RNU6-4P-201ENST00000384205 FBXO22Q8NEZ5 403 aa6.95□□□□□ -1.3
RNU6-4P-201ENST00000384205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.95□□□□□ -1.3
RNU6-4P-201ENST00000384205 PHF8Q9UPP1 1060 aa6.95□□□□□ -1.3
RNU6-4P-201ENST00000384205 ILDR1Q86SU0 546 aaPredicted RBP6.94□□□□□ -1.3
RNU6-4P-201ENST00000384205 PLCG2P16885 1265 aa6.93□□□□□ -1.3
RNU6-4P-201ENST00000384205 IRX5P78411 483 aaPredicted RBP6.92□□□□□ -1.3
RNU6-4P-201ENST00000384205 OCEL1Q9H607 264 aa6.92□□□□□ -1.3
RNU6-4P-201ENST00000384205 FAM205CA6NFA0 338 aa6.91□□□□□ -1.3
RNU6-4P-201ENST00000384205 RNF166Q96A37 237 aaPredicted RBP6.9□□□□□ -1.3
RNU6-4P-201ENST00000384205 TSHZ2Q9NRE2 1034 aa6.9□□□□□ -1.3
RNU6-4P-201ENST00000384205 MS4A4AQ96JQ5 239 aa6.89□□□□□ -1.31
RNU6-4P-201ENST00000384205 L3MBTL3Q96JM7 780 aaPredicted RBP6.88□□□□□ -1.31
RNU6-4P-201ENST00000384205 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.88□□□□□ -1.31
RNU6-4P-201ENST00000384205 G3V3G9 751 aa6.87□□□□□ -1.31
RNU6-4P-201ENST00000384205 PPP1R37O75864 691 aa6.87□□□□□ -1.31
RNU6-4P-201ENST00000384205 PDCD7Q8N8D1 485 aaKnown RBP6.87□□□□□ -1.31
RNU6-4P-201ENST00000384205 BOLA1Q9Y3E2 137 aa6.83□□□□□ -1.32
RNU6-4P-201ENST00000384205 DPY19L2Q6NUT2 758 aa6.82□□□□□ -1.32
RNU6-4P-201ENST00000384205 WDR70Q9NW82 654 aa6.82□□□□□ -1.32
RNU6-4P-201ENST00000384205 PDE4AP27815 886 aa6.81□□□□□ -1.32
RNU6-4P-201ENST00000384205 MICALL2Q8IY33 904 aa6.81□□□□□ -1.32
RNU6-4P-201ENST00000384205 KDM2AQ9Y2K7 1162 aa6.81□□□□□ -1.32
RNU6-4P-201ENST00000384205 MYT1LQ9UL68 1186 aa6.8□□□□□ -1.32
RNU6-4P-201ENST00000384205 CADPS2Q86UW7 1296 aa6.78□□□□□ -1.32
RNU6-4P-201ENST00000384205 CRISPLD2Q9H0B8 497 aa6.77□□□□□ -1.33
RNU6-4P-201ENST00000384205 TMC2Q8TDI7 906 aa6.76□□□□□ -1.33
RNU6-4P-201ENST00000384205 GPHNQ9NQX3 736 aaPredicted RBP6.76□□□□□ -1.33
RNU6-4P-201ENST00000384205 C3orf67Q6ZVT6 689 aa6.75□□□□□ -1.33
RNU6-4P-201ENST00000384205 P3H3Q8IVL6 736 aa6.75□□□□□ -1.33
RNU6-4P-201ENST00000384205 LARP6Q9BRS8 491 aaKnown RBP6.75□□□□□ -1.33
RNU6-4P-201ENST00000384205 MFSD10Q14728 455 aa6.74□□□□□ -1.33
RNU6-4P-201ENST00000384205 DDX27Q96GQ7 796 aaKnown RBP6.74□□□□□ -1.33
RNU6-4P-201ENST00000384205 NCKAP5LQ9HCH0 1330 aa6.74□□□□□ -1.33
RNU6-4P-201ENST00000384205 FOXK1P85037 733 aa6.71□□□□□ -1.34
RNU6-4P-201ENST00000384205 E2F4Q16254 413 aa6.71□□□□□ -1.34
RNU6-4P-201ENST00000384205 KIF3CO14782 793 aa6.7□□□□□ -1.34
RNU6-4P-201ENST00000384205 PPP1R15BQ5SWA1 713 aa6.7□□□□□ -1.34
RNU6-4P-201ENST00000384205 BCANQ96GW7 911 aa6.7□□□□□ -1.34
RNU6-4P-201ENST00000384205 C2orf72A6NCS6 295 aa6.69□□□□□ -1.34
RNU6-4P-201ENST00000384205 HOXB3P14651 431 aaPredicted RBP6.69□□□□□ -1.34
RNU6-4P-201ENST00000384205 HOXB1P14653 301 aaPredicted RBP6.68□□□□□ -1.34
RNU6-4P-201ENST00000384205 CAMK2BQ13554 666 aa6.67□□□□□ -1.34
RNU6-4P-201ENST00000384205 DSG2Q14126 1118 aa6.67□□□□□ -1.34
RNU6-4P-201ENST00000384205 ARHGEF1Q92888 912 aaKnown RBP6.67□□□□□ -1.34
RNU6-4P-201ENST00000384205 ERBB3P21860 1342 aa6.67□□□□□ -1.34
RNU6-4P-201ENST00000384205 PTGER2P43116 358 aa6.66□□□□□ -1.34
RNU6-4P-201ENST00000384205 NBR1Q14596 966 aa6.66□□□□□ -1.34
RNU6-4P-201ENST00000384205 PLPP6Q8IY26 295 aa6.66□□□□□ -1.34
RNU6-4P-201ENST00000384205 ARIH1Q9Y4X5 557 aaPredicted RBP6.66□□□□□ -1.34
RNU6-4P-201ENST00000384205 TMEM92Q6UXU6 159 aa6.65□□□□□ -1.34
RNU6-4P-201ENST00000384205 KCNV2Q8TDN2 545 aa6.64□□□□□ -1.35
RNU6-4P-201ENST00000384205 PLA2G2EQ9NZK7 142 aa6.63□□□□□ -1.35
RNU6-4P-201ENST00000384205 VARS2Q5ST30 1063 aaKnown RBP6.62□□□□□ -1.35
RNU6-4P-201ENST00000384205 TBC1D12O60347 775 aa6.61□□□□□ -1.35
RNU6-4P-201ENST00000384205 SLC34A2O95436 690 aa6.61□□□□□ -1.35
RNU6-4P-201ENST00000384205 SPDYE16A6NNV3 312 aaPredicted RBP6.6□□□□□ -1.35
RNU6-4P-201ENST00000384205 MAP3K9P80192 1104 aa6.59□□□□□ -1.35
RNU6-4P-201ENST00000384205 DOK7Q18PE1 504 aa6.59□□□□□ -1.35
RNU6-4P-201ENST00000384205 ZNF687Q8N1G0 1237 aa6.59□□□□□ -1.35
RNU6-4P-201ENST00000384205 RIMBP2O15034 1052 aa6.58□□□□□ -1.36
RNU6-4P-201ENST00000384205 ZNF710Q8N1W2 664 aa6.58□□□□□ -1.36
RNU6-4P-201ENST00000384205 OXER1Q8TDS5 423 aa6.58□□□□□ -1.36
RNU6-4P-201ENST00000384205 PTCD2Q8WV60 388 aaKnown RBP6.58□□□□□ -1.36
RNU6-4P-201ENST00000384205 EMILIN3Q9NT22 766 aa6.58□□□□□ -1.36
RNU6-4P-201ENST00000384205 TULP1O00294 542 aaPredicted RBP6.57□□□□□ -1.36
RNU6-4P-201ENST00000384205 ZNF316A6NFI3 1004 aaPredicted RBP6.56□□□□□ -1.36
RNU6-4P-201ENST00000384205 SMYD5Q6GMV2 418 aa6.56□□□□□ -1.36
RNU6-4P-201ENST00000384205 ZSWIM6Q9HCJ5 1215 aa6.56□□□□□ -1.36
RNU6-4P-201ENST00000384205 DPYSL4O14531 572 aa6.55□□□□□ -1.36
RNU6-4P-201ENST00000384205 PDIA6Q15084 440 aa6.54□□□□□ -1.36
RNU6-4P-201ENST00000384205 UPF1Q92900 1129 aaKnown RBP eCLIP6.54□□□□□ -1.36
RNU6-4P-201ENST00000384205 TESPA1A2RU30 521 aaPredicted RBP6.52□□□□□ -1.37
RNU6-4P-201ENST00000384205 PCDHGA4Q9Y5G9 962 aa6.52□□□□□ -1.37
RNU6-4P-201ENST00000384205 SEMA3EO15041 775 aa6.51□□□□□ -1.37
RNU6-4P-201ENST00000384205 EVI5O60447 810 aa6.51□□□□□ -1.37
RNU6-4P-201ENST00000384205 ANKRD13DQ6ZTN6 518 aa6.51□□□□□ -1.37
RNU6-4P-201ENST00000384205 ANO8Q9HCE9 1232 aaPredicted RBP6.51□□□□□ -1.37
RNU6-4P-201ENST00000384205 ARSIQ5FYB1 569 aa6.47□□□□□ -1.37
RNU6-4P-201ENST00000384205 GPR153Q6NV75 609 aa6.47□□□□□ -1.37
RNU6-4P-201ENST00000384205 KDM4FA0A1W2PPD8 638 aa6.46□□□□□ -1.38
RNU6-4P-201ENST00000384205 PSDA5PKW4 1024 aaPredicted RBP6.46□□□□□ -1.38
RNU6-4P-201ENST00000384205 LSM11P83369 360 aaKnown RBP eCLIP6.46□□□□□ -1.38
RNU6-4P-201ENST00000384205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.46□□□□□ -1.38
RNU6-4P-201ENST00000384205 HCSTQ9UBK5 93 aa6.46□□□□□ -1.38
RNU6-4P-201ENST00000384205 PHF14O94880 888 aa6.45□□□□□ -1.38
RNU6-4P-201ENST00000384205 EPAS1Q99814 870 aa6.45□□□□□ -1.38
RNU6-4P-201ENST00000384205 GRXCR2A6NFK2 248 aa6.44□□□□□ -1.38
RNU6-4P-201ENST00000384205 MLLT3P42568 568 aaPredicted RBP6.44□□□□□ -1.38
RNU6-4P-201ENST00000384205 LMOD2Q6P5Q4 547 aa6.44□□□□□ -1.38
RNU6-4P-201ENST00000384205 NUDT7P0C024 238 aa6.43□□□□□ -1.38
RNU6-4P-201ENST00000384205 DDX12PQ92771 950 aa6.43□□□□□ -1.38
RNU6-4P-201ENST00000384205 FBXW7Q969H0 707 aa6.43□□□□□ -1.38
RNU6-4P-201ENST00000384205 JPH4Q96JJ6 628 aa6.43□□□□□ -1.38
RNU6-4P-201ENST00000384205 IRX2Q9BZI1 471 aaPredicted RBP6.43□□□□□ -1.38
RNU6-4P-201ENST00000384205 OSBPP22059 807 aa6.41□□□□□ -1.38
RNU6-4P-201ENST00000384205 FOSBP53539 338 aa6.41□□□□□ -1.38
RNU6-4P-201ENST00000384205 TYW1BQ6NUM6 668 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms