RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 LSM11P83369 360 aaKnown RBP eCLIP8□□□□□ -1.13
RNU6-48P-201ENST00000384161 SOX12O15370 315 aa7.99□□□□□ -1.13
RNU6-48P-201ENST00000384161 ANKRD13DQ6ZTN6 518 aa7.99□□□□□ -1.13
RNU6-48P-201ENST00000384161 KHSRPQ92945 711 aaKnown RBP eCLIP7.99□□□□□ -1.13
RNU6-48P-201ENST00000384161 POTEEQ6S8J3 1075 aa7.98□□□□□ -1.13
RNU6-48P-201ENST00000384161 PHF8Q9UPP1 1060 aa7.95□□□□□ -1.14
RNU6-48P-201ENST00000384161 TRIM41Q8WV44 630 aa7.94□□□□□ -1.14
RNU6-48P-201ENST00000384161 KIF3CO14782 793 aa7.93□□□□□ -1.14
RNU6-48P-201ENST00000384161 RNF25Q96BH1 459 aaPredicted RBP7.93□□□□□ -1.14
RNU6-48P-201ENST00000384161 PBX2P40425 430 aa7.91□□□□□ -1.14
RNU6-48P-201ENST00000384161 FBXO22Q8NEZ5 403 aa7.9□□□□□ -1.14
RNU6-48P-201ENST00000384161 PLA2G2EQ9NZK7 142 aa7.9□□□□□ -1.14
RNU6-48P-201ENST00000384161 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.89□□□□□ -1.15
RNU6-48P-201ENST00000384161 ZFP91Q96JP5 570 aaPredicted RBP7.89□□□□□ -1.15
RNU6-48P-201ENST00000384161 RIOK3O14730 519 aaKnown RBP7.87□□□□□ -1.15
RNU6-48P-201ENST00000384161 HCSTQ9UBK5 93 aa7.87□□□□□ -1.15
RNU6-48P-201ENST00000384161 LHX6Q9UPM6 363 aa7.87□□□□□ -1.15
RNU6-48P-201ENST00000384161 AXIN2Q9Y2T1 843 aa7.87□□□□□ -1.15
RNU6-48P-201ENST00000384161 SLC34A2O95436 690 aa7.86□□□□□ -1.15
RNU6-48P-201ENST00000384161 NUDT7P0C024 238 aa7.86□□□□□ -1.15
RNU6-48P-201ENST00000384161 C2orf72A6NCS6 295 aa7.84□□□□□ -1.15
RNU6-48P-201ENST00000384161 VGFO15240 615 aaPredicted RBP7.84□□□□□ -1.15
RNU6-48P-201ENST00000384161 KDM4FA0A1W2PPD8 638 aa7.83□□□□□ -1.16
RNU6-48P-201ENST00000384161 HRO43593 1189 aa7.82□□□□□ -1.16
RNU6-48P-201ENST00000384161 NLRP6P59044 892 aa7.82□□□□□ -1.16
RNU6-48P-201ENST00000384161 ADGRD1Q6QNK2 874 aa7.82□□□□□ -1.16
RNU6-48P-201ENST00000384161 PCDHGA4Q9Y5G9 962 aa7.82□□□□□ -1.16
RNU6-48P-201ENST00000384161 MFRPQ9BY79 579 aa7.8□□□□□ -1.16
RNU6-48P-201ENST00000384161 ARHGAP33O14559 1287 aa7.79□□□□□ -1.16
RNU6-48P-201ENST00000384161 TK2O00142 265 aa7.77□□□□□ -1.17
RNU6-48P-201ENST00000384161 DMRTA1Q5VZB9 504 aa7.75□□□□□ -1.17
RNU6-48P-201ENST00000384161 BCL11BQ9C0K0 894 aaPredicted RBP7.74□□□□□ -1.17
RNU6-48P-201ENST00000384161 PSDA5PKW4 1024 aaPredicted RBP7.72□□□□□ -1.17
RNU6-48P-201ENST00000384161 PSEN2P49810 448 aa7.71□□□□□ -1.18
RNU6-48P-201ENST00000384161 AMER1Q5JTC6 1135 aaPredicted RBP7.71□□□□□ -1.18
RNU6-48P-201ENST00000384161 IFFO2Q5TF58 517 aa7.7□□□□□ -1.18
RNU6-48P-201ENST00000384161 PTCD2Q8WV60 388 aaKnown RBP7.7□□□□□ -1.18
RNU6-48P-201ENST00000384161 RGS20O76081 388 aa7.69□□□□□ -1.18
RNU6-48P-201ENST00000384161 KCTD12Q96CX2 325 aaKnown RBP7.68□□□□□ -1.18
RNU6-48P-201ENST00000384161 STK24Q9Y6E0 443 aa7.68□□□□□ -1.18
RNU6-48P-201ENST00000384161 TMC2Q8TDI7 906 aa7.66□□□□□ -1.18
RNU6-48P-201ENST00000384161 PPP1R37O75864 691 aa7.64□□□□□ -1.19
RNU6-48P-201ENST00000384161 TAOK2Q9UL54 1235 aa7.62□□□□□ -1.19
RNU6-48P-201ENST00000384161 VPS9D1Q9Y2B5 631 aa7.62□□□□□ -1.19
RNU6-48P-201ENST00000384161 FOXK1P85037 733 aa7.61□□□□□ -1.19
RNU6-48P-201ENST00000384161 A0A0G2JS52 829 aa7.6□□□□□ -1.19
RNU6-48P-201ENST00000384161 BHMG1C9JSJ3 638 aaPredicted RBP7.6□□□□□ -1.19
RNU6-48P-201ENST00000384161 STK25O00506 426 aa7.6□□□□□ -1.19
RNU6-48P-201ENST00000384161 PPP4R3BQ5MIZ7 849 aa7.6□□□□□ -1.19
RNU6-48P-201ENST00000384161 IRX2Q9BZI1 471 aaPredicted RBP7.6□□□□□ -1.19
RNU6-48P-201ENST00000384161 SLC4A5Q9BY07 1137 aa7.59□□□□□ -1.19
RNU6-48P-201ENST00000384161 RTN4Q9NQC3 1192 aaKnown RBP7.59□□□□□ -1.19
RNU6-48P-201ENST00000384161 PTPN5P54829 565 aa7.58□□□□□ -1.2
RNU6-48P-201ENST00000384161 THSD4Q6ZMP0 1018 aa7.57□□□□□ -1.2
RNU6-48P-201ENST00000384161 PLPP6Q8IY26 295 aa7.57□□□□□ -1.2
RNU6-48P-201ENST00000384161 KCNK17Q96T54 332 aa7.57□□□□□ -1.2
RNU6-48P-201ENST00000384161 GPHNQ9NQX3 736 aaPredicted RBP7.56□□□□□ -1.2
RNU6-48P-201ENST00000384161 DSG2Q14126 1118 aa7.53□□□□□ -1.2
RNU6-48P-201ENST00000384161 STAC3Q96MF2 364 aa7.53□□□□□ -1.2
RNU6-48P-201ENST00000384161 OXER1Q8TDS5 423 aa7.52□□□□□ -1.21
RNU6-48P-201ENST00000384161 BCL2L12Q9HB09 334 aa7.52□□□□□ -1.21
RNU6-48P-201ENST00000384161 TBC1D12O60347 775 aa7.51□□□□□ -1.21
RNU6-48P-201ENST00000384161 ZBED2Q9BTP6 218 aa7.51□□□□□ -1.21
RNU6-48P-201ENST00000384161 RGL2O15211 777 aa7.5□□□□□ -1.21
RNU6-48P-201ENST00000384161 FOSBP53539 338 aa7.48□□□□□ -1.21
RNU6-48P-201ENST00000384161 KCNH8Q96L42 1107 aa7.48□□□□□ -1.21
RNU6-48P-201ENST00000384161 ECM2O94769 699 aaPredicted RBP7.46□□□□□ -1.22
RNU6-48P-201ENST00000384161 ITGBL1O95965 494 aaPredicted RBP7.46□□□□□ -1.22
RNU6-48P-201ENST00000384161 PKD2Q13563 968 aa7.46□□□□□ -1.22
RNU6-48P-201ENST00000384161 ZNF454Q8N9F8 522 aa7.46□□□□□ -1.22
RNU6-48P-201ENST00000384161 WNT2BQ93097 391 aa7.46□□□□□ -1.22
RNU6-48P-201ENST00000384161 ANO8Q9HCE9 1232 aaPredicted RBP7.45□□□□□ -1.22
RNU6-48P-201ENST00000384161 LCE2BO14633 110 aa7.44□□□□□ -1.22
RNU6-48P-201ENST00000384161 MRPL50Q8N5N7 158 aaKnown RBP7.44□□□□□ -1.22
RNU6-48P-201ENST00000384161 PTPREP23469 700 aa7.43□□□□□ -1.22
RNU6-48P-201ENST00000384161 GOLGA8CPA6NN73 597 aa7.4□□□□□ -1.22
RNU6-48P-201ENST00000384161 UPF1Q92900 1129 aaKnown RBP eCLIP7.4□□□□□ -1.22
RNU6-48P-201ENST00000384161 ADAM33Q9BZ11 813 aa7.4□□□□□ -1.22
RNU6-48P-201ENST00000384161 CRISPLD2Q9H0B8 497 aa7.4□□□□□ -1.22
RNU6-48P-201ENST00000384161 Q6ZNB5 142 aa7.39□□□□□ -1.23
RNU6-48P-201ENST00000384161 JPH4Q96JJ6 628 aa7.39□□□□□ -1.23
RNU6-48P-201ENST00000384161 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
RNU6-48P-201ENST00000384161 ZDHHC16Q969W1 377 aa7.37□□□□□ -1.23
RNU6-48P-201ENST00000384161 RABGEF1Q9UJ41 708 aa7.35□□□□□ -1.23
RNU6-48P-201ENST00000384161 SOWAHBA6NEL2 793 aa7.34□□□□□ -1.23
RNU6-48P-201ENST00000384161 PPP1R15BQ5SWA1 713 aa7.34□□□□□ -1.23
RNU6-48P-201ENST00000384161 EVI5O60447 810 aa7.33□□□□□ -1.24
RNU6-48P-201ENST00000384161 BCAMP50895 628 aa7.33□□□□□ -1.24
RNU6-48P-201ENST00000384161 PROX2Q3B8N5 592 aa7.33□□□□□ -1.24
RNU6-48P-201ENST00000384161 HS6ST3Q8IZP7 471 aa7.33□□□□□ -1.24
RNU6-48P-201ENST00000384161 NCKAP5LQ9HCH0 1330 aa7.32□□□□□ -1.24
RNU6-48P-201ENST00000384161 PPP1R3GB7ZBB8 358 aa7.32□□□□□ -1.24
RNU6-48P-201ENST00000384161 DCAF8L2P0C7V8 631 aa7.32□□□□□ -1.24
RNU6-48P-201ENST00000384161 COL9A1P20849 921 aa7.32□□□□□ -1.24
RNU6-48P-201ENST00000384161 ANKK1Q8NFD2 765 aa7.32□□□□□ -1.24
RNU6-48P-201ENST00000384161 LAPTM4AQ15012 233 aa7.31□□□□□ -1.24
RNU6-48P-201ENST00000384161 NYAP1Q6ZVC0 841 aa7.31□□□□□ -1.24
RNU6-48P-201ENST00000384161 LAPTM4BQ86VI4 370 aa7.31□□□□□ -1.24
RNU6-48P-201ENST00000384161 DNAJC5Q9H3Z4 198 aa7.31□□□□□ -1.24
RNU6-48P-201ENST00000384161 NKX1-1Q15270 411 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms