RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
RNU6-48P-201ENST00000384161 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
RNU6-48P-201ENST00000384161 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
RNU6-48P-201ENST00000384161 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
RNU6-48P-201ENST00000384161 FOXD1Q16676 465 aa15.29■□□□□ 0.04
RNU6-48P-201ENST00000384161 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
RNU6-48P-201ENST00000384161 MSH5O43196 834 aa14.38□□□□□ -0.11
RNU6-48P-201ENST00000384161 PIAS4Q8N2W9 510 aaPredicted RBP14.1□□□□□ -0.15
RNU6-48P-201ENST00000384161 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
RNU6-48P-201ENST00000384161 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
RNU6-48P-201ENST00000384161 ADRA2BP18089 450 aa13.91□□□□□ -0.18
RNU6-48P-201ENST00000384161 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
RNU6-48P-201ENST00000384161 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
RNU6-48P-201ENST00000384161 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
RNU6-48P-201ENST00000384161 CACNB1Q02641 598 aaPredicted RBP12.53□□□□□ -0.4
RNU6-48P-201ENST00000384161 HOXD11P31277 338 aaPredicted RBP12.3□□□□□ -0.44
RNU6-48P-201ENST00000384161 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
RNU6-48P-201ENST00000384161 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
RNU6-48P-201ENST00000384161 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
RNU6-48P-201ENST00000384161 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
RNU6-48P-201ENST00000384161 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
RNU6-48P-201ENST00000384161 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
RNU6-48P-201ENST00000384161 DNAJC5BQ9UF47 199 aa11.98□□□□□ -0.49
RNU6-48P-201ENST00000384161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
RNU6-48P-201ENST00000384161 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
RNU6-48P-201ENST00000384161 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
RNU6-48P-201ENST00000384161 POTEHQ6S545 545 aa11.45□□□□□ -0.58
RNU6-48P-201ENST00000384161 U3KPZ7 1027 aaPredicted RBP11.41□□□□□ -0.58
RNU6-48P-201ENST00000384161 DSG3P32926 999 aa11.39□□□□□ -0.59
RNU6-48P-201ENST00000384161 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
RNU6-48P-201ENST00000384161 CAPN15O75808 1086 aa11.25□□□□□ -0.61
RNU6-48P-201ENST00000384161 SLC4A2P04920 1241 aa11.11□□□□□ -0.63
RNU6-48P-201ENST00000384161 ABCB7O75027 752 aa10.97□□□□□ -0.65
RNU6-48P-201ENST00000384161 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
RNU6-48P-201ENST00000384161 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.65
RNU6-48P-201ENST00000384161 KCNA4P22459 653 aa10.9□□□□□ -0.66
RNU6-48P-201ENST00000384161 APLP2Q06481 763 aa10.9□□□□□ -0.66
RNU6-48P-201ENST00000384161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
RNU6-48P-201ENST00000384161 HNRNPUL2Q1KMD3 747 aaKnown RBP10.84□□□□□ -0.67
RNU6-48P-201ENST00000384161 SAMD1Q6SPF0 538 aaPredicted RBP10.79□□□□□ -0.68
RNU6-48P-201ENST00000384161 RBM42Q9BTD8 480 aaKnown RBP10.77□□□□□ -0.69
RNU6-48P-201ENST00000384161 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
RNU6-48P-201ENST00000384161 POLA2Q14181 598 aa10.64□□□□□ -0.71
RNU6-48P-201ENST00000384161 MYCNP04198 464 aaPredicted RBP10.56□□□□□ -0.72
RNU6-48P-201ENST00000384161 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
RNU6-48P-201ENST00000384161 AKT1S1Q96B36 256 aa10.5□□□□□ -0.73
RNU6-48P-201ENST00000384161 ATF5Q9Y2D1 282 aaPredicted RBP10.44□□□□□ -0.74
RNU6-48P-201ENST00000384161 PIP4P2Q8N4L2 257 aa10.43□□□□□ -0.74
RNU6-48P-201ENST00000384161 REM2Q8IYK8 340 aaPredicted RBP10.41□□□□□ -0.74
RNU6-48P-201ENST00000384161 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
RNU6-48P-201ENST00000384161 ZBTB12Q9Y330 459 aaPredicted RBP10.34□□□□□ -0.75
RNU6-48P-201ENST00000384161 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
RNU6-48P-201ENST00000384161 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
RNU6-48P-201ENST00000384161 HAX1O00165 279 aa10.26□□□□□ -0.77
RNU6-48P-201ENST00000384161 FOXD4L1Q9NU39 408 aa10.26□□□□□ -0.77
RNU6-48P-201ENST00000384161 EVX2Q03828 476 aa10.24□□□□□ -0.77
RNU6-48P-201ENST00000384161 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
RNU6-48P-201ENST00000384161 ZBTB22O15209 634 aa10.07□□□□□ -0.8
RNU6-48P-201ENST00000384161 SPDYE2BA6NHP3 402 aa10.05□□□□□ -0.8
RNU6-48P-201ENST00000384161 SPDYE6P0CI01 402 aa10.05□□□□□ -0.8
RNU6-48P-201ENST00000384161 SPDYE2Q495Y8 402 aa10.05□□□□□ -0.8
RNU6-48P-201ENST00000384161 C19orf67A6NJJ6 358 aa10.01□□□□□ -0.81
RNU6-48P-201ENST00000384161 ATXN8OSP0DMR3 200 aa10□□□□□ -0.81
RNU6-48P-201ENST00000384161 PRKAR2AP13861 404 aaKnown RBP9.99□□□□□ -0.81
RNU6-48P-201ENST00000384161 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
RNU6-48P-201ENST00000384161 GABBR2O75899 941 aa9.94□□□□□ -0.82
RNU6-48P-201ENST00000384161 SPDYE1Q8NFV5 336 aaPredicted RBP9.94□□□□□ -0.82
RNU6-48P-201ENST00000384161 SSUH2Q9Y2M2 353 aa9.92□□□□□ -0.82
RNU6-48P-201ENST00000384161 FBLN2P98095 1184 aa9.91□□□□□ -0.82
RNU6-48P-201ENST00000384161 CLEC11AQ9Y240 323 aa9.89□□□□□ -0.83
RNU6-48P-201ENST00000384161 LHX8Q68G74 356 aa9.88□□□□□ -0.83
RNU6-48P-201ENST00000384161 ZNF692Q9BU19 519 aaPredicted RBP9.83□□□□□ -0.84
RNU6-48P-201ENST00000384161 CHADLQ6NUI6 762 aa9.81□□□□□ -0.84
RNU6-48P-201ENST00000384161 POTEIP0CG38 1075 aa9.79□□□□□ -0.84
RNU6-48P-201ENST00000384161 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
RNU6-48P-201ENST00000384161 PABPN1Q86U42 306 aaKnown RBP eCLIP9.69□□□□□ -0.86
RNU6-48P-201ENST00000384161 FARP1Q9Y4F1 1045 aaPredicted RBP9.65□□□□□ -0.86
RNU6-48P-201ENST00000384161 CD44P16070 742 aaKnown RBP9.64□□□□□ -0.87
RNU6-48P-201ENST00000384161 CLCN6P51797 869 aa9.62□□□□□ -0.87
RNU6-48P-201ENST00000384161 ZNF579Q8NAF0 562 aaKnown RBP9.53□□□□□ -0.88
RNU6-48P-201ENST00000384161 DCBLD2Q96PD2 775 aa9.48□□□□□ -0.89
RNU6-48P-201ENST00000384161 OTUD5Q96G74 571 aa9.47□□□□□ -0.89
RNU6-48P-201ENST00000384161 POTEB2H3BUK9 544 aa9.46□□□□□ -0.9
RNU6-48P-201ENST00000384161 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
RNU6-48P-201ENST00000384161 CREBZFQ9NS37 354 aa9.46□□□□□ -0.9
RNU6-48P-201ENST00000384161 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
RNU6-48P-201ENST00000384161 ZRANB1Q9UGI0 708 aa9.44□□□□□ -0.9
RNU6-48P-201ENST00000384161 PELP1Q8IZL8 1130 aaKnown RBP9.34□□□□□ -0.91
RNU6-48P-201ENST00000384161 STAG3Q9UJ98 1225 aa9.32□□□□□ -0.92
RNU6-48P-201ENST00000384161 POTEMA6NI47 508 aa9.31□□□□□ -0.92
RNU6-48P-201ENST00000384161 MNX1P50219 401 aaPredicted RBP9.31□□□□□ -0.92
RNU6-48P-201ENST00000384161 PHF12Q96QT6 1004 aa9.31□□□□□ -0.92
RNU6-48P-201ENST00000384161 POTEJP0CG39 1038 aa9.27□□□□□ -0.93
RNU6-48P-201ENST00000384161 POTEGQ6S5H5 508 aa9.27□□□□□ -0.93
RNU6-48P-201ENST00000384161 ASTLQ6HA08 431 aaPredicted RBP9.24□□□□□ -0.93
RNU6-48P-201ENST00000384161 CSRNP3Q8WYN3 585 aa9.24□□□□□ -0.93
RNU6-48P-201ENST00000384161 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
RNU6-48P-201ENST00000384161 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
RNU6-48P-201ENST00000384161 PAK3O75914 559 aaPredicted RBP9.2□□□□□ -0.94
RNU6-48P-201ENST00000384161 EHMT2Q96KQ7 1210 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms