RNA–Protein interactions for RNA: ENST00000382045.3

LINC00487-201, long intergenic non-protein coding RNA 487, humanhuman

TSL 2 BASIC

Gene LINC00487, Length 2,131 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-201ENST00000382045 CARMIL2Q6F5E8 1435 aa23.54■■□□□ 1.36
LINC00487-201ENST00000382045 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
LINC00487-201ENST00000382045 HIRIP3Q9BW71 556 aaPredicted RBP23.54■■□□□ 1.36
LINC00487-201ENST00000382045 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
LINC00487-201ENST00000382045 FBLN2P98095 1184 aa23.52■■□□□ 1.36
LINC00487-201ENST00000382045 KIF14Q15058 1648 aa23.52■■□□□ 1.36
LINC00487-201ENST00000382045 ZNF644Q9H582 1327 aaPredicted RBP23.52■■□□□ 1.36
LINC00487-201ENST00000382045 JPH4Q96JJ6 628 aa23.5■■□□□ 1.35
LINC00487-201ENST00000382045 MPHOSPH9Q99550 1183 aa23.5■■□□□ 1.35
LINC00487-201ENST00000382045 KCNH8Q96L42 1107 aa23.49■■□□□ 1.35
LINC00487-201ENST00000382045 CAMSAP2Q08AD1 1489 aa23.49■■□□□ 1.35
LINC00487-201ENST00000382045 GPATCH8Q9UKJ3 1502 aaKnown RBP23.47■■□□□ 1.35
LINC00487-201ENST00000382045 ADGBQ8N7X0 1667 aa23.47■■□□□ 1.35
LINC00487-201ENST00000382045 ABCA8O94911 1581 aa23.46■■□□□ 1.35
LINC00487-201ENST00000382045 CROCC2H7BZ55 1655 aa23.46■■□□□ 1.35
LINC00487-201ENST00000382045 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
LINC00487-201ENST00000382045 CDC42BPAQ5VT25 1732 aa23.39■■□□□ 1.34
LINC00487-201ENST00000382045 ANKRD30BQ9BXX2 1392 aa23.39■■□□□ 1.33
LINC00487-201ENST00000382045 ADGRL2O95490 1459 aa23.38■■□□□ 1.33
LINC00487-201ENST00000382045 RPRD2Q5VT52 1461 aaKnown RBP23.38■■□□□ 1.33
LINC00487-201ENST00000382045 FOXD1Q16676 465 aa23.38■■□□□ 1.33
LINC00487-201ENST00000382045 NCOA1Q15788 1441 aa23.37■■□□□ 1.33
LINC00487-201ENST00000382045 ATP10BO94823 1461 aa23.35■■□□□ 1.33
LINC00487-201ENST00000382045 CCER2I3L3R5 266 aa23.35■■□□□ 1.33
LINC00487-201ENST00000382045 ANP32CO43423 234 aa23.35■■□□□ 1.33
LINC00487-201ENST00000382045 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
LINC00487-201ENST00000382045 TEX14Q8IWB6 1497 aa23.33■■□□□ 1.33
LINC00487-201ENST00000382045 PZPP20742 1482 aa23.33■■□□□ 1.33
LINC00487-201ENST00000382045 L3MBTL2Q969R5 705 aa23.33■■□□□ 1.32
LINC00487-201ENST00000382045 SLC4A1APQ9BWU0 796 aaKnown RBP23.3■■□□□ 1.32
LINC00487-201ENST00000382045 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
LINC00487-201ENST00000382045 ZNF777Q9ULD5 760 aaPredicted RBP23.29■■□□□ 1.32
LINC00487-201ENST00000382045 CHD1O14646 1710 aa23.29■■□□□ 1.32
LINC00487-201ENST00000382045 HSPA5P11021 654 aaKnown RBP23.29■■□□□ 1.32
LINC00487-201ENST00000382045 SHANK2Q9UPX8 1470 aa23.27■■□□□ 1.32
LINC00487-201ENST00000382045 SUPT16HQ9Y5B9 1047 aaKnown RBP23.26■■□□□ 1.31
LINC00487-201ENST00000382045 ANKRD30AQ9BXX3 1397 aa23.26■■□□□ 1.31
LINC00487-201ENST00000382045 WASHC2AQ641Q2 1341 aa23.25■■□□□ 1.31
LINC00487-201ENST00000382045 EIF4G2P78344 907 aaKnown RBP eCLIP23.25■■□□□ 1.31
LINC00487-201ENST00000382045 PTPRGP23470 1445 aa23.22■■□□□ 1.31
LINC00487-201ENST00000382045 ANKRD50Q9ULJ7 1429 aa23.21■■□□□ 1.31
LINC00487-201ENST00000382045 SHROOM2Q13796 1616 aa23.2■■□□□ 1.31
LINC00487-201ENST00000382045 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.3
LINC00487-201ENST00000382045 KIAA1107Q9UPP5 1409 aa23.2■■□□□ 1.3
LINC00487-201ENST00000382045 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
LINC00487-201ENST00000382045 ARHGEF5Q12774 1597 aa23.18■■□□□ 1.3
LINC00487-201ENST00000382045 POLR1AO95602 1720 aaPredicted RBP23.18■■□□□ 1.3
LINC00487-201ENST00000382045 CDC42BPBQ9Y5S2 1711 aa23.17■■□□□ 1.3
LINC00487-201ENST00000382045 PREX2Q70Z35 1606 aa23.17■■□□□ 1.3
LINC00487-201ENST00000382045 MBD5Q9P267 1494 aa23.16■■□□□ 1.3
LINC00487-201ENST00000382045 SPATA31E1Q6ZUB1 1445 aa23.14■■□□□ 1.29
LINC00487-201ENST00000382045 CNTLNQ9NXG0 1405 aa23.14■■□□□ 1.29
LINC00487-201ENST00000382045 KDM5DQ9BY66 1539 aa23.14■■□□□ 1.29
LINC00487-201ENST00000382045 SAMD9LQ8IVG5 1584 aa23.13■■□□□ 1.29
LINC00487-201ENST00000382045 CCDC7Q96M83 1385 aa23.11■■□□□ 1.29
LINC00487-201ENST00000382045 PKD2Q13563 968 aa23.11■■□□□ 1.29
LINC00487-201ENST00000382045 C11orf95C9JLR9 678 aaPredicted RBP23.09■■□□□ 1.29
LINC00487-201ENST00000382045 TSPY4P0CV99 314 aa23.08■■□□□ 1.28
LINC00487-201ENST00000382045 TSPY10P0CW01 314 aa23.08■■□□□ 1.28
LINC00487-201ENST00000382045 CCDC141Q6ZP82 1450 aa23.07■■□□□ 1.28
LINC00487-201ENST00000382045 KIF15Q9NS87 1388 aa23.07■■□□□ 1.28
LINC00487-201ENST00000382045 NUP155O75694 1391 aa23.06■■□□□ 1.28
LINC00487-201ENST00000382045 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
LINC00487-201ENST00000382045 HNRNPMP52272 730 aaKnown RBP eCLIP23.05■■□□□ 1.28
LINC00487-201ENST00000382045 ERCC6L2Q5T890 1561 aa23.05■■□□□ 1.28
LINC00487-201ENST00000382045 ABCC2Q92887 1545 aa23.04■■□□□ 1.28
LINC00487-201ENST00000382045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.02■■□□□ 1.28
LINC00487-201ENST00000382045 KIF7Q2M1P5 1343 aa23■■□□□ 1.27
LINC00487-201ENST00000382045 SYCP2Q9BX26 1530 aa23■■□□□ 1.27
LINC00487-201ENST00000382045 ARHGEF12Q9NZN5 1544 aa23■■□□□ 1.27
LINC00487-201ENST00000382045 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
LINC00487-201ENST00000382045 MAST1Q9Y2H9 1570 aa22.99■■□□□ 1.27
LINC00487-201ENST00000382045 KDM5CP41229 1560 aa22.98■■□□□ 1.27
LINC00487-201ENST00000382045 UHRF1BP1Q6BDS2 1440 aa22.98■■□□□ 1.27
LINC00487-201ENST00000382045 ARHGAP5Q13017 1502 aa22.98■■□□□ 1.27
LINC00487-201ENST00000382045 RSPH4AQ5TD94 716 aa22.97■■□□□ 1.27
LINC00487-201ENST00000382045 BCORL1Q5H9F3 1711 aa22.97■■□□□ 1.27
LINC00487-201ENST00000382045 FAM135AQ9P2D6 1515 aa22.96■■□□□ 1.27
LINC00487-201ENST00000382045 RALGAPBQ86X10 1494 aa22.94■■□□□ 1.26
LINC00487-201ENST00000382045 USP47Q96K76 1375 aa22.94■■□□□ 1.26
LINC00487-201ENST00000382045 PRKRIP1Q9H875 184 aaPredicted RBP22.94■■□□□ 1.26
LINC00487-201ENST00000382045 CLASP1Q7Z460 1538 aa22.93■■□□□ 1.26
LINC00487-201ENST00000382045 FKBP8Q14318 412 aa22.93■■□□□ 1.26
LINC00487-201ENST00000382045 UNC13BO14795 1591 aa22.93■■□□□ 1.26
LINC00487-201ENST00000382045 PLXNC1O60486 1568 aa22.92■■□□□ 1.26
LINC00487-201ENST00000382045 ZNF326Q5BKZ1 582 aaKnown RBP22.91■■□□□ 1.26
LINC00487-201ENST00000382045 ZCCHC11Q5TAX3 1644 aaKnown RBP22.9■■□□□ 1.26
LINC00487-201ENST00000382045 HNRNPUQ00839 825 aaKnown RBP eCLIP22.9■■□□□ 1.26
LINC00487-201ENST00000382045 PLEKHH2Q8IVE3 1493 aa22.89■■□□□ 1.26
LINC00487-201ENST00000382045 CCDC184Q52MB2 194 aa22.88■■□□□ 1.25
LINC00487-201ENST00000382045 NEFLP07196 543 aa22.86■■□□□ 1.25
LINC00487-201ENST00000382045 UHRF1BP1LA0JNW5 1464 aa22.86■■□□□ 1.25
LINC00487-201ENST00000382045 BCANQ96GW7 911 aa22.84■■□□□ 1.25
LINC00487-201ENST00000382045 IQGAP3Q86VI3 1631 aa22.84■■□□□ 1.25
LINC00487-201ENST00000382045 ARID4BQ4LE39 1312 aaPredicted RBP22.83■■□□□ 1.25
LINC00487-201ENST00000382045 DHX29Q7Z478 1369 aaKnown RBP22.82■■□□□ 1.24
LINC00487-201ENST00000382045 PLCH2O75038 1416 aa22.81■■□□□ 1.24
LINC00487-201ENST00000382045 DUOX2Q9NRD8 1548 aa22.8■■□□□ 1.24
LINC00487-201ENST00000382045 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
LINC00487-201ENST00000382045 ABCC1P33527 1531 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms